G176203


Basic Information

Item Value
gene id G176203
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 14572010 ~ 14572473 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU238634
tctttgtgggttgttaaccagctttaggatgtgtgttagctagctaagttagctaggttatgtgtgtgttagttaactggctaagttaactaggttatgtgtgtgttagttagctagtttaaatgtgtgttagttagctagtttaaatgtgttttagttagctaggttatgtgtgtgttagttaactggctaagttaactaggttatgtgtgtgttagttaactggctaagttagctaggttatgtgtgtgttagttaactggctaagttaactaggttatgtgtgtgttagttaactggctaagttagctaggtta

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU238634 True 317 lncRNA 0.36 2 14572010 14572473

Neighbor

gene id symbol gene type direction distance location
LOC103043578 LOC108411121 coding downstream 257177 14285938 ~ 14314833 (-)
zbtb21 zbtb21 coding downstream 314790 14248668 ~ 14257220 (-)
rad51c rad51c coding downstream 327910 14229557 ~ 14244100 (-)
ppm1e ppm1e,LOC102780278 coding downstream 349699 14142174 ~ 14222311 (-)
LOC103039046 myl10,LOC108413922,LOC107734439,LOC108276823,LOC107577538,LOC107728843,LOC107588876 coding downstream 633736 13935026 ~ 13938274 (-)
LOC103045094 NA coding upstream 120207 14692680 ~ 14714840 (-)
LOC103045405 LOC103045405,LOC108442105 coding upstream 143038 14715511 ~ 14720986 (-)
LOC103045698 NA coding upstream 159128 14731601 ~ 14736873 (-)
LOC103046216 lhfp,LOC103046216,LOC108442104,LOC107691645,LOC107577306,LOC107751385,LOC107746987,LOC107589696,LOC107686123 coding upstream 170843 14743316 ~ 14795102 (-)
LOC103046520 LOC108442103 coding upstream 289234 14861707 ~ 14902599 (-)
G176184 NA non-coding downstream 219883 14318721 ~ 14352127 (-)
G176179 NA non-coding downstream 297648 14273468 ~ 14274362 (-)
G176154 NA non-coding downstream 465932 14101882 ~ 14106078 (-)
G176134 rabgef1,LOC107734461 non-coding downstream 473332 14096250 ~ 14098678 (-)
G176139 rabgef1,LOC107734461,LOC107728875,LOC107577469 non-coding downstream 481895 14087099 ~ 14090115 (-)
G176248 NA non-coding upstream 155865 14728338 ~ 14728932 (-)
G176277 NA non-coding upstream 267033 14839506 ~ 14844568 (-)
G176308 NA non-coding upstream 382830 14955303 ~ 14955563 (-)
G176415 NA non-coding upstream 640648 15213121 ~ 15213420 (-)
G176421 NA non-coding upstream 670317 15242790 ~ 15243027 (-)
G176138 NA other downstream 499326 14069749 ~ 14072684 (-)
G176136 LOC108415819 other downstream 505866 14063500 ~ 14066144 (-)
G176146 LOC108415819 other downstream 520049 14051562 ~ 14051961 (-)
tex14 NA other downstream 757500 13774803 ~ 13814510 (-)
LOC111195111 NA other downstream 823360 13746636 ~ 13748650 (-)
LOC103044788 wnt11,wnt11r,LOC107686210,LOC107589704,LOC107747044 other upstream 84797 14657270 ~ 14670670 (-)
LOC111194989 NA other upstream 955823 15528296 ~ 15565463 (-)
stoml2 stoml2,LOC107686459,LOC107688641,LOC107569390,LOC106563216 other upstream 1208082 15780555 ~ 15790644 (-)
G177526 NA other upstream 3599376 18171849 ~ 18174525 (-)
G177568 NA other upstream 3825109 18397582 ~ 18403008 (-)

Expression


Co-expression Network