G68547


Basic Information

Item Value
gene id G68547
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 206280 ~ 211322 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU78098
CTTGGCAAAATGACTTTACTCGTTCTCTCAGACAGACCTGTCAAAGGGCTGAAAGTAAATGGAAAAAAGACAAACTACAAGTGTCATATGAAATTTTAAGTGACTCTCTTTCTGCCTATCAGCGAGCTGCTAAGGCTGCATCTCTCTGAATTAATTTAAAAAAATAGCCATAAGCCTAATATCCTTTTTTCCACTATTGAATCTGTTCTTCACCCAAATGTTAAGCTGTTTCCTGAGACATCTGTCTCTCTTTGTGAGGATTTTGCAAGACATTTTAATGATAAGATTTCCCAAATTACATCTTTATTGCCTCTGTCATCATACAAATTGTCTGATAATCCTATCTCCCCTTCCACTTGGTCTGTCTTTGAGCCTGTAAATTTAAATACTCTGATTGAGATTATGTCTACTCTGAAACCTACTACGTGCCCCCAGGATGTAATTCCTGTACATTTCCTTGTACAAATTATTGAGACTGTTGGCCCTGACTTATTGTCTATTATTAACAAATGTATCTATACTGGCACTGTACCTGGTGACTTTAAACTTGCCACGGTGCGGCCTTATCTTAAAGCACCTAGTTTGAATCCCGCATTACCAGCTAACTTTCGTCCTATTTCAAACTTGTCTTTTTTTTTTTCTAAAATTTTAGAGAAAGTGGTTCTAAATCACCTTCAATCTTACTTAACTATTAATTCAATCTCTGAAAAATTTCAATCTGGTTTTAAATGACTTGCAAGTCATTTTTTAAGCCTCAATGAGAGTGTAAGATTATTTTAATCTCCGTTTATTGTCCCTAGTCATGCCTCATTCTCAGTTTGTCTTTTTCACTCATTGAATGCATAGGCCTATGGGAAAAGAGTCATGAACATGAAGCCAATCCGTTCAAAAAACCTCCTCCCAATCATACTTCTGTACATGGCTTTTATACATGTTCAAGGGATGGTGTAGCAACTGTCCAATGAGAATATACTTTCATGATATAGGAACGTGGTACATATAGAAAAACGTCTCGGTTACGTACATCAGTAGTGACCGACGAATTGGGATATCGCTAGAGAGCCCTATCAGCTTCGAGTGAACTAAAATGGAGTTGACGTGCGATATTTGCATAATGTGCACCACCCCCGCCAGGTGGTATAAATAGGGGAGCAGATGCCATCGCACTCTGTTTTTCGCTGAGGAGACAACCTAGTCCACACTACAGCGAGGGTACAGAAACTGTGGCGACGGGACGTACGTCTCCATTCCCACCTTCAGGGAATGAGGGTTACATACGTAACCGAGACGTTCCCTTTCAGTCGGTCACGTTCGACGTACATCAGTAGTGACCGACGAATTGGGATCCCAAATAAAGCGCCACAGTTATGAACCCCTTCCAGTGCCCAGCACAAGCTCTAGCCACCTGGCGCACCAATGGGACAGGGAAGCTTACGCCGAGAGAGTCTACTGCTGTTCCGAAATACACACTAAGTAAACTAGACTACACTGGTTCTACACGAAGGCTATAGAATCTAGCGAACGTGTTAGGTGTCGCCCAGCCCGCAGCTCTACAGATATCTGTCAGCGAGTCGCCTTGCGCCAGCGCCCAGGAAGAGGCCACTTCTCTGGTGGAGTGGGCTCTCAACCCGAGCGGGCAAGCCACGCCCTGGGATTCATACGCCAGGGCGATGGCATCCACTATCCAGTGGGCCATCTTCTGCTTGGAGACAGCCTTTCCCTTCTGCTGGCCTCCGTAACAGAAAAAGAGCTGATCTGAGGTCCTGAAGCTTTGCGTTCTGTCCACGTACAGGCGCAGAGTGCGGACGGGACAGAGCAAAGCTAGGGCTGAGTCTGCCTCCTCCGAAGGCAGCGCTTGCAGGTTCACTACCTGATCTCAAAAAGGAGTGGTAGGAACCTTGGGCACATATCCAGGCCGGGGTCTCAGGATAACGTGAGAGTCACCGGGCCTGAATTCCAGGCACGATTCGTCAACCGAAAATGCGTGCAGGTCCCCTACCCTCTTGAGCGAGGCCAGTGCAACCAGGATTGCAAAGGCTCGAAGGGATGACCCCAGAGAGATGTAAGAACCAGGGTGAGATCCCAAGAGGGTACAGAGGGAGGCCAGGGAGGATTCAGTCTCCTCGCCTCCCTCAGGAACCTGACGATCAGATCGTGCTTCCCTAGCGATTTACCTGCATAGTGATGTGCGGCGACACGGAACATAATCGGGGGTCCTCTCGGTGAGAGGAGCACCATTCGACGAACAGGTTCCACTTCAACGTATAGAGGTTCCTCGTAGAAGGAGCTCTAGCGGAAGTGATAGTGTCTGCGACCGCTTGCGGGAGATCACTCAGAACCTCCGCGTCCCGTCCAGGGACCACACATGGAGTTTCCACAGGTCAGGACGTGGGTGCCAGAGGGTGCCCTGTCTCTGAGTCAGGAGGTCCTTCCTTAGAGGAATGGGCCAGGGAGGTGCTGTTGCAAGGAGCGTGAGGTCAGAGAACCAGGTCCAAGTGGGCCAGTATGGAGCCACTAACAAGACTTGCTCCTCGTCCTCCCTGACTTTGCACAGGAGCTGTGCGAGAAGGCTCACTGGGGGAAACACATACTTGCGTAGGCCCCGGGGCCAGCTGAGTGCCAGGGCATAGAACCACTGGCAGTGGGCAGTCTCCGGGGAGGCGAACAGATCTATCTGTGCCTCGCCGAAGCGCTGCCAGATCAGCTGGACCACCTGGGGATGGAGTCTCCATTCGCCCGGAAGCGGAGGCTGCCGTGAGAGCTCGTCGGCTGCACGGTTGAGCACGCCTGGGACATGAATGGCACGAAGCGACCTCAGATGCTTCTGACTCCATAACAAGAGATGGCGGGCGAGTTGCGACATACGGCGGGAGCGTAGATCACCCTGATGGTTGATGTACGCAACGGAGAGTTTGCTCTTGTCCCAGTTGACCTGAAGACCCAACCGGCTGAGGTGAGCTAACACCATGTCCCTGTGTTCGCACAACTGCTCCCGCGAGCTGGCCAGGATGAGCCAGTCATCGAGGTAGTTGAGAATGGGAACGCCCTGTTCCTTGAGCGGAACAATGGTCGCCTCCGCAACCTTTGTAAAGACGCGGGGCGACAGGGCCAGCCCAAAGGGTAGGACTTTGTACTGATATGCCCGACCCTCGAACGCAAACTGTAGAAAGGGTCTGTGACGAGGCAGAATCGAGACATGAAAGTATGCATCCTTCAGGTCGATCACTGCAAACCAATCCTAGGGACGGATGCATTCGAAAATGCGTTTCTGCGTAAGCATCTTGAACGGCAGCCTGTGAAGGGACCGGTTCAGGACACGCAGATCCAGGTTTGGCCGTAGCCCACCGCCCTTCTTGGGTACAATGAAGTAGGGGCTGTAGAACCCTGACTTCATATCGGCTGGAGGGACCGGCTCGATTGCATCCTTCGCCAGGAGGACAGCAATCTCCGCCCGGAGAACAGGTGCATTGTCCAGTGACACCTGAGTGTAGTGGACACCCCTGAAGACCGGGGGATGCTGGGCGAACTGAATCGCATGGCCGAGTCTGATGTGCGAATGAGCCAGCGGGACGGGCTGGGGAGCGCTATCCAGGCTTTCAGACACCGAGCCAGCGGGACCAAAGGCACCACAGACGTACCGGGGGTGGGGCAGCAAAGCAGAGTGCTGGGACCCGACTCGGACGGCATAGCAGCCCGAAGTGGGGTCAGACTCTGCGAGGTGACAGTGCGAATGGGAGACAGCTGGGGGCGGCCTCGACCAACACACTGGGACCTGCTGCCGAAGTGAGAGGGGGCTGTGAGTGGCAAGGCGGGGCCTCGCACACTGACCCTCTTGTGACCTGGAGGATTGGGAAACTGCTCTTTTTGTGAGGAAGTGGGTACCGCTGGACTCCGGAGAGTCAGCGGCGGGACAGACAGGTACGCAAATTCCCCCCGGCCCTCCTCCGAGGGTGGGAGAGACGATGGAGTACTCTCCCGAAGAGCAGAAACCTTCCCCTCCAGGTCGCCCGTCTCAGGATCGCGTGTTTCTCGATCTCTTGCCACCTGGCTTGGCCTGAGCGGGCTGGGCGCTGCGTCTGCGACCGGCTCCCTGCTGTTTGGCGGGTGTAGGCTGCTGCTTCGCCGACTTAGCAGAGGCGGAGGACGACGCAGGCGGGCGCCCTCGGCGACGAGCGGGCTGAGGCCATGCGGCCGGCGGCGGGGTGAAGGCAGCAGGGGACAGCCGGGGTAGAGGGACCAGCACGCTCGATCGGCAGCACCACCGGTTGCAGTGAAGTAGAGGGGGCAGGGGCCCGCGGAGCGGCACTCGGCAGCGAAAGCCCTGACCGTGATCCTCAGATCACCCTGCCTACACGCCGACACACCGTCACCCCAGCCAAAGCCAGAGAAAACGGCGGAACGGGGCACAGGGGAGGGGACCCCCGCTCCCTGAGAACCAAGGAACGAGAGTCTCGATGTCAACACTGCAATAGTCATGTTCTCACAGTGAGAACATGAACTATCCACAAAAGCATGCTGAACGCCCAGGCACGTGATGCAGCGATTGTGGCCGTCAGCGGGGACCAATGAACGACCGTATCCAGTAACGCACATACGAAATGACATCTTGAAAAAGACGCAGGGTTCGTCTGTGAAGCTCTTTTAGAAGGGGAAGATTCAGCTCACTTGTGCTGAAGCACACAGGGAGTGTCACGATGTGTTTGGGTACACCACTCCCCGAACACAACGGAGGAACCGGCCCAAATCACAACAGACACAGCTGGGTTTGTTTGGGAAATTTTTTGCTGTAACAACAGCAGTTGAGAGCTTAAGCTCAGGCTCCTCGGGAAGCTCGCGACCTCGCTGAAGTGCCTTTACACCAACACAAGACGCTGTACTTCACACACAGGCTTGTAGAATTCACTCTCAGTCTGAAAGCTGGAACACAAGTGGTTGGCTCCGAAGCGAAAGACGATGGCATCTGCTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78098 True 4968 lncRNA 0.53 3 206280 211322

Neighbor

gene id symbol gene type direction distance location
CI01000012_00178282_00181473 NA coding downstream 23268 178182 ~ 183012 (-)
CI01000012_00176813_00177864 NA coding downstream 28354 176344 ~ 177926 (-)
CI01000012_00095178_00097740 NA coding downstream 108540 94665 ~ 97740 (-)
CI01000012_00074656_00075480 NA coding downstream 130517 74585 ~ 75763 (-)
CI01000012_00017728_00018696 NA coding downstream 185488 17390 ~ 20792 (-)
CI01000012_00223417_00223713 NA coding upstream 11893 223215 ~ 224149 (-)
CI01000012_00260363_00261340 HCAR1-3 coding upstream 48974 260296 ~ 261508 (-)
CI01000012_00340814_00363240 HAAO coding upstream 129343 340665 ~ 363240 (-)
CI01000012_00382850_00384215 NA coding upstream 170389 381711 ~ 384426 (-)
CI01000012_00427641_00472235 NA coding upstream 216251 427573 ~ 472577 (-)
G68543 NA non-coding downstream 8996 192148 ~ 197284 (-)
G68492 NA non-coding downstream 61568 29219 ~ 144712 (-)
G68508 NA non-coding downstream 94114 111775 ~ 112166 (-)
G68489 NA non-coding downstream 180813 25170 ~ 25467 (-)
G68555 NA non-coding upstream 37190 248512 ~ 248805 (-)
G68560 NA non-coding upstream 58496 269818 ~ 270043 (-)
G68463 NA non-coding upstream 97443 308765 ~ 309093 (-)
G68567 NA non-coding upstream 102601 313923 ~ 314910 (-)
G68568 NA non-coding upstream 105618 316940 ~ 317168 (-)
G69150 NA other upstream 354141 565463 ~ 566956 (-)
G69161 NA other upstream 376282 587604 ~ 588015 (-)
G69277 NA other upstream 518598 729920 ~ 730465 (-)
G69332 NA other upstream 564042 775364 ~ 775879 (-)
CI01000012_01139864_01192154 TTC7A other upstream 924354 1135676 ~ 1192154 (-)

Expression


Co-expression Network