LOC103024155 (si:dkey-81j8.6,LOC108440140,LOC107720718,LOC107572716,LOC107678005,LOC105904646)


Basic Information

Item Value
gene id LOC103024155
gene name si:dkey-81j8.6,LOC108440140,LOC107720718,LOC107572716,LOC107678005,LOC105904646
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 18539898 ~ 18558444 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU240134
gattaaTTACAATAAGTGTGTTTTCACCGTGAATTACACTGTTATTTGTTAAGTAGTCAGAGGTGTGTGTAGTCAGAtggagatgctggtgctgtgtCTGAGTTGCAGGGCATCCTACGCTGCTGTGCGGCGGATGTGGTTTTCATAGCAGCTTCCTGACACACTGCGAGACAtacgtgtaagtgtgtgtgtgtgtgtatgcgtgagtgtgtgtagatgtAAAAGTTACCAATCAAcagttttctctctgtctcagagagtgtgtatgtgagcgtgtgtgtgtgtgtgtagggcaCGGCCGTGGCCACACTGGAGGTTCTACAGGAAGTTCTCCAGATTCTTTGGAGTGTTTGGAGTGTTTGGACTCTCGGTGGGTGAGGGTGGCAGTGTGTGGTGGGGGACGCGATGGCGACCCTCCTGATGCGACTGTTCCGTCTAGGAGTGGAGAAGAAGCGAGTGAGGCAGTATGAACATCTGAAGAGGGATGTGGATCCTCGTGAGAGCTGGGAGACCTTGGGGGAACTGGGCGATGGAGCGTTCGGAAAAGTCTACAAGGCTCAGAACAGGGTTAGTGGTGTGATGGGTGCGGTTAAGGTGATGGAGGTACGCAGTGAGGAGCAGCTGGAGGATTACATCACTGAGATCAACATCCTGGCAGAATGTCGCCACGCCCACATCATCTCCCTGCTGGAGGCCGTATACTTTGAGGGATGGCTTTGGATCCTCATTGAGTTCTGTCCTGGAGGAGCACTGGACGACATCATGTTAGG
>XM_022680716.1
atgtAAAAGTTACCAATCAAcagttttctctctgtctcagagagtgtgtatgtgagcgtgtgtgtgtgtgtgtagggcaCGGCCGTGGCCACACTGGAGGTTCTACAGGAAGTTCTCCAGATTCTTTGGAGTGTTTGGAGTGTTTGGACTCTCGGTGGGTGAGGGTGGCAGTGTGTGGTGGGGGACGCGATGGCGACCCTCCTGATGCGACTGTTCCGTCTAGGAGTGGAGAAGAAGCGAGTGAGGCAGTATGAACATCTGAAGAGGGATGTGGATCCTCGTGAGAGCTGGGAGACCTTGGGGGAACTGGGCGATGGAGCGTTCGGAAAAGTCTACAAGGCTCAGAACAGGGTTAGTGGTGTGATGGGTGCGGTTAAGGTGATGGAGGTACGCAGTGAGGAGCAGCTGGAGGATTACATCACTGAGATCAACATCCTGGCAGAATGTCGCCACGCCCACATCATCTCCCTGCTGGAGGCCGTATACTTTGAGGGATGGCTTTGGATCCTCATTGAGTTCTGTCCTGGAGGAGCACTGGACGACATCATGTTAGtaatcCGGTGTGTGTGCAGGATGGCTCCGGAGGTGATCATGTGTGAGACGTCGAAGGATACTCCATACAGCAGTAAAGCTGATATCTGGTCTCTGGGCATCACTCTGATTGAAGCAGCGGAGATGGAGCCGCCCCACCACTCCCTCAACCCCATGAGGGTCCTACTAAAGATCACCAAATCCCCCCCGCCCACACTGACCCACCCACGCCGCTGGTCCTCCCATTTCCAGGACTTCCTGCGGAGGGCGCTGCAGAAGAACCCGGAGTCCCGTTGGGGAGCTCAGCAGCTGCTGGCCCACCCATTCGCCTACGCCGGTCGTGACGGTCGAGCCCTGAAGGAGCTCATAGCCGAGGCTAAAGCCGAGGTCACAGAGGTCATAGAGGCAGAGtcaCTATCGGATCTCCGGTGTTCTGTTGACGAAGCAGGACCGTCCGACACGGACCCTCCAGCTCAGCCGGACCCAGGAACAGATCCACCCCCAGTTCCTCAGACAGCTCCATCCGAGGAACCGGCAGCGTCTCAGCCTGACCCTGAGGTCAGTAAAGGGGTTAAAGTGACCCGCCGAGCGTCCAGCGCCCCGGATAGAGCCCAGAAGCTGGTGCGGCGTCTCTCTATGCCCGGAAACCTGCTGTCCTTCTTCACCGGCGGCTCCCGCAGGAGCAAGTCCGGGTTCTGGGGCGACGCATTGAAACCTGAGGGGAACCAGGAGCAGCAGGACATGGATAAAGAAGGTCGGAGCGAAGGACATTCAGAAGCTGGAATAGAAGCTCTGGACGTTTCACACCACAGTGATGGAGGGAGCAGTAAGGGAGGAAGGGAGGAAACACCTGAGTCTGATCATCAAACTTCAGCCAGTCAGGCCAAAGACAACACTGACACCAAAGAGGGGGCAGAGCCTGATGGCCAGTGCAGGAGCGCTAAAGAAGATGCAAACTGTCTCAAAGCAGAAGAGACCCAACAGCAAGGAGAAACACTAGATACTACCAGAGAGGAAGCTGAACATACAGAGGAAGAAGAACGAATACTGAAGCAGTGTAGTGCAGAAGCTAAAGCTGTGGTTGAGGATGGAGCCAATCAGGAACCAGCATTCTGGAGATGCCTCCACCCTCCTGACTCGACAACCAACGAAAAGAACCAGGATGATACAGATCTCCTGACCGAGGCTCTGAGTTTGGATACATCAAACAGAAGTGAACCAGTTGAAGCGAAAAAGGACCGTTCACACGATTACCTGGATTTAGCCGGATTTACATCACAGGCTCAGCTTTCCTTCACTAAAGAAGAGCTTAGCAGAAGCCCAGCAGTGGAGAAAGAGAGTACAAATACCTGCGAGGAACACCAGGAACATCAGAAACAGGCGGAGAACCCGACTTACACTTCTGATCAGGCGAACAAAGAAGAGAAAACTGACACAGGAAGAATAGAAGAAGATGGAGGAGCAGAAACTCAAGATACTAAAGACTTTAAAGAAGGTTTGGAGGATAAatcagagacagataaagatttTGAAAGTGTGGAGAACCATCTCTCAGATGCTGAGAGTCCAAGTGACAATATAATAACAAAAGAAAGTGCTGAAGAAGCACCACAAATAATGGAAGTTACCTCCTCCAGCAACGGCAAGGAAGAGCTGGAAGAGCAGGAATCTCCTCTAAACGATTCTGAACAAGTTTACCTCAAAGACAATGAGGTGAAGATCAACGAAGATAAAATAGATCAGGTGGTGAGGAATGAGGATGAGCTAGAAGGTGAGGAAACTAAGGATAAAACCACAATAACTGACAAATCAGTTCAACATCAAAGTGTCAGTCTTCCCAAAAGTTGTGGCTCTGAAGTAGTAAACGAGGTAAAGATCAAAGAAGACATGATAGATCAGGAATTGAGGCATGAGGATGAAGCACAAAGTGAAGAAAATAAAGATACAACTCCAAAAACTGACAAATTAGACCAACATCAAAGTGTCAGTCTTCCCAATAGTTCTGGCTCTGAAGTGGTAAACGAGGTAAAGATCAAAGAAGAGAAGACAAGTGAGGAATTGAGGCAGAAGGATGAGGTAGAAGATAAAGAAAATAGAGATGACAACAGACAAGAAACTGACAAATCAGACCAACATCAAAGCATCAATGTACTTAAAAGTGgctttgaaaaagtaaaagaggTACAGATTGAAGAAGACATGAAAGGTGAGGAATTGATGCGAGAGGATGATAAGGTACAAGGTGaggaaaataaagataaaaccaCAGAAACTGACAAATCAGAGCGTCCTCAAAGCATAAATCTTCCTGAAAGTTCTGGTTCTGAAGGTACAGCTGTGAGCAGTACCTCAGAACCTCGTGAGGTAGAGTCTGGGAAGACTAAGCAGGATTCCTCGGGAGAGAAGGTGATTAAAGTCAGTAAGCAGGTGAGCTTCGCCGGAGAGCCGGACAATCGGGAGGCGGGGGAGGGGGTTGACGGGTCGGGCTGTATCGGTAACGGAGGATCTGTGGGGAATAAAGCAGAACCAGTTAACACCGAGACGAACGGGACTCTTCATCAGAACCTCCAAAAACCCACAGTACTGTCCATCTCCTCCAACACTGACCACGAGAAGAACGGTCCACCTCCACCACTGTCTCCTACTGATGAAGGGGTTTTGTCCATGAACCGCAGGACAGTGAAGAAGACTCGTAAGTTCATGGTGGACGGGCGAGAGGTCAGTGTTACGACATCAAAGGTCATCAGTGAGAAAGACAGTAAAGAGGAGCAGATGCGCTCAGTCAGgcgtCAGGAGCTGCATGCTCTGAAGCAGCTTCAGCGTGAGGAGCAGAGGGAGTTTACTCAGTTGGAGcagaagctgcagcagcagcgggAGCAGATGTTCCGCCACATCGAACAGGAAATGAGCAGTAAGAAGCAGTACTATGACGGGGAGCTGGAGCGGTTGGAGAAGCAGTATCAGCAGCAGAGTGTGAGGATGGAGACTGAACACACCCAGCGGCTGCAGGAGGAGGCCCGCCGCCTCAAAACCCAGCAGGAGAAAGAGCTGCACCGCAAAAGCAGCACCCTCAAATCAGACCCAGTGGAGGAGCAGCGATTtctgcagaagcagcagcaggagctgaaCGATGCTCTTCAGAAAGCCGTACAGGAACACAAGAGGAAAGTGGCCTCCATGGACTGGGAGGTTACAGTCAAATCACAGCAGCTGAAGAGAGCGCGAGAGTCTGTGATCTGGGAGCTGGAACAGCGCCACCTGCAGGAGAAGTACCACCTGTTTAAGCAGCAGGTGAAGGAGCAGTACTCTCTACAGCGCCAGCAGCTCAGCAAGAGACACAACAAGGATATGGAGCGGGCGAGTCGGTTCCAGCAGTCTCTTGTGGAGGAGCAGAAGTCAGCTCAGGCTCAGGAGAGAGGCCGACTCCTCAAAGCCCAGCGCGCCGAGTCCAAAACCCGCCTGACCCAGTACCGCCAGGAGCTCAGGAAGCAGGGGCTCACCGGACCCGAGCAGAGACACAAAATCACACAGTTCCTGGCGGAGGAGGAGTCCAGGCAGAAGCAGGAGCGCAGTCAGCTGCAGGAGACGCAGGAGAGTCAGCTGAAGGAGGTGCAGGAGCAATGCGACGCTAACATCACCGAACTCCAGCAGCTGCAGAACGAGAAGCTGCAGGTTCTGGTGGagatggagaagaagaagaTCAAATGTCTGGAAGATGAGCACACACTGGAGCTGAACGAGTGGAGGGATAAACTTGCCTGCAGGAAGGAGgcattAGAGGAAGACCTGGCTCGTAAGAGGAGGGAATATGAAGGCAGTAGGAGGCGGGGCAGTGAACCCGAGTCCCGGTTCCAGGCCCGGCGCGCCCGGTTCTTCCCCAGCCTGAGCTTCTCCTGAACCAGACAGCCCCACCCCCATCGTAGCCACACCCCTCACAGCTCCGCCCCCTTACAGCTCCACCCAGCTATAACAGAAGCTCCACAGCTTCTGTTAtagaatgtataatatataaatgttaaaatatgtacAGAACCTTACATACACACCTCGACTCGGGGACAACTGTAAACATATGTATATAGATTATTAATTACATGCTAAGCTAGTTAGCACTGacttttacactgacatgccaaaagtcatgggacagcaatTTGAAAATTGATGGTAGTTATCTGTTGCCATTGTGTTTAGGTGTGCAGAATTCTCCATAATACATTGTTGTCAACTGGCATCTCTGACGATGCTATCCTGGGAAAATGCTAACA

Function

symbol description
si:dkey-81j8.6 Predicted to enable ATP binding activity; protein serine kinase activity; and protein threonine kinase activity. Predicted to act upstream of or within protein phosphorylation.

NR:

description
PREDICTED: serine/threonine-protein kinase 10-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU240134 False 770 TUCP 0.52 3 18539898 18543997
XM_022680716.1 True 4799 mRNA 0.51 17 18540114 18558444

Neighbor

gene id symbol gene type direction distance location
letm2 letm2,LOC107586128,LOC107705077,LOC107678006,LOC107687501 coding upstream 2850 18524865 ~ 18537048 (+)
LOC103047729 NA coding upstream 192568 18338861 ~ 18347330 (+)
LOC103021446 NA coding upstream 202717 18331681 ~ 18337181 (+)
LOC103044456 NA coding upstream 287198 18236297 ~ 18252700 (+)
LOC103045166 LOC108440562,LOC108276891,LOC107586118,LOC107687659 coding upstream 327080 18181740 ~ 18212818 (+)
LOC103044763 NA coding downstream 1895 18560339 ~ 18563776 (+)
LOC103027413 LOC103027413,LOC108440158,LOC103369922 coding downstream 80474 18638918 ~ 18645170 (+)
LOC103045675 LOC108440144,LOC100694769,LOC101477777,LOC102295999,LOC102799311 coding downstream 132488 18690932 ~ 18738736 (+)
anxa4 anxa4,LOC107746213 coding downstream 233925 18792369 ~ 18806551 (+)
LOC103028061 NA coding downstream 259468 18817912 ~ 18829242 (+)
G177281 whsc1l1,LOC107678004,LOC107720716 non-coding upstream 23977 18513564 ~ 18515921 (+)
G177282 whsc1l1,LOC107720716,LOC107678004 non-coding upstream 45111 18493006 ~ 18494787 (+)
G177279 NA non-coding upstream 49292 18485707 ~ 18490606 (+)
G177283 NA non-coding upstream 57797 18480504 ~ 18482101 (+)
G177274 NA non-coding upstream 67001 18469936 ~ 18472897 (+)
G177298 pcna,LOC107658578,LOC107583397,LOC107688976 non-coding downstream 46100 18604544 ~ 18609129 (+)
G177300 NA non-coding downstream 87183 18645627 ~ 18648103 (+)
G177314 bmp1,LOC108440159 non-coding downstream 90319 18648763 ~ 18651539 (+)
G177324 NA non-coding downstream 142548 18700992 ~ 18701689 (+)
G177349 NA non-coding downstream 287251 18845695 ~ 18847305 (+)
LOC103047412 golga7,LOC108276767,LOC107553707,LOC107687624,LOC107678053,LOC107586122 other upstream 209409 18324873 ~ 18330489 (+)
G177219 NA other upstream 313765 18224273 ~ 18226133 (+)
xpo7 xpo7,LOC107678024,LOC107586117 other upstream 365380 18138712 ~ 18174518 (+)
G176882 inpp5j other upstream 1492909 17042835 ~ 17046989 (+)
fam136a fam136a,LOC102792467 other upstream 1715570 16820935 ~ 16824328 (+)
LOC111194983 NA other downstream 1161857 19720301 ~ 19722560 (+)
LOC103042206 LOC108428882 other downstream 1192498 19750942 ~ 19775791 (+)
LOC103043854 NA other downstream 1530794 20089238 ~ 20096711 (+)
G177950 NA other downstream 1580378 20138822 ~ 20139564 (+)
ier3ip1 ier3ip1,LOC106633120 other downstream 1837933 20396377 ~ 20399165 (+)

Expression


Co-expression Network