G178173


Basic Information

Item Value
gene id G178173
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 21291522 ~ 21295833 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU241386
tttatttcattttaaataatgcatATCCATTTCCAAGTCTTACAAAATGTATAAGATTACACTTTTTCACAGGTTTTAGTATCAAAATAGGATTTCCCTTCCAGAGGGAGCCATTCAGGTTTAGTACATCAATACATCTCATGTCCTGCATCaagggctgggcaatattgcaatattttattgtaatgaCAAAATTTACTTTTCTTAGTATATTGTGGATATAATtgatgcttaaagaacactaacccattgaatgttttattataaagaGAATAATTACatctcagcagtgccattttaATCATTATTGCTATTCAAATCATAACTACACTTTAGTAGtgtaattttagtcatacatttacctcaattTGCCTGTGACACTCAAGTCACATGTAGCTAACTAACTCGACAGTCAGTCTTTTagttaacaaaaacaaatgctaaagctaaattaGCTCAGGTAACATTATTATCCTAGCCCTGTCCAGCCTGTGCATTATCTTTTAGCTGGAAAAAAGACGATACTTGATACCTGTCACTAGTGTTTAAAATCATCCCAATGTTAGAGAAAACTCTGCAATATGACTGCAAGTAATTGttctctatgaattattcagcctTTTTGCTTATAAAACTGAACACTAAATACTAACAAACATTCAGTGCACCCATTGTAAAAATCTGCAGTCTttcaatataattatataaaatgtataccatattgcccagcccctACCTACAACAATTATACTTATTCTATGTGAGTGAAAGCTCCTCTATTCCTCCTACAGTAACAAtaaaatcctgttcatgtatgATGGGGTGCAACTGTACAGTTAGTTCTGTTCACACTCAGGTCCACGATAAAAACAGCATCACTTCTTACAGGAGATCTTCCTTATGTTGTACTGATCGTTCCTGGGGTTGAACTCAACCTCAAACTCGCACGACAGCCGctttTGTGCCAAAGCACAGGTCTCCAAATCTGCCGGCTCTGTTTTTAGGCACTTAGTCTTTGCAATGGTTGCTTCAATCTTGAAGTTGATCATGTTGGTGACCTGTGTTTGTGCAGATGTAATCTCCAGAAGCTTGAAATACTTCTTGGCCTTGGATTTCATATTGAACTTCTCCACAGCTTTCTTAGCCGCCGCTTGGACATCCTCCCTTTCAGAGTGGGCTTCTGACCAGCCTCCCAAAGGGTTAACATTTATTGCTGTAATCTCTTCCTCCTCTATGGGCGGCTGGGCTTCAATCAGCTGGGCCACAGAGAGAAACCCGAACAGCAGAAAGAGGTACAGATCCATGCTTACAGCTGTGTTCTCTCTACAGCAGGAGCAAGAGactgtttgtgtgagagagagagatataacagagagagagtgaagaagtTCCTCTCGCTGCAGAATGTCAGACTGGCCTGATAGCTCACACCCTTCCTGGCAGGgtgggtggagtgtgtgagcTTTATAGAGTGCCAGACtctga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241386 True 1485 TUCP 0.39 4 21291522 21295833

Neighbor

gene id symbol gene type direction distance location
tmem267 tmem267,si:busm1-79m10.4,LOC107653487,LOC107702605,LOC107750222,LOC107756535,LOC107554236 coding downstream 6825 21274520 ~ 21284697 (-)
sigmar1 sigmar1,LOC107573076,LOC107653128 coding downstream 866752 20421350 ~ 20424770 (-)
katnal2 katnal2,LOC107573073,LOC102797751,LOC104955398 coding downstream 870704 20408361 ~ 20420818 (-)
LOC103029139 NA coding downstream 1063228 20219002 ~ 20228294 (-)
LOC103029774 NA coding downstream 1073328 20168776 ~ 20218194 (-)
rassf6 rassf6 coding upstream 1551 21297384 ~ 21312937 (-)
LOC103045065 lpar1,LOC107554848,LOC107723319 coding upstream 93394 21389227 ~ 21423245 (-)
epha5 epha5,LOC108428864,LOC107702602 coding upstream 249384 21545217 ~ 21665726 (-)
LOC111194991 NA coding upstream 626497 21922330 ~ 21923015 (-)
plppr1 plppr1,LOC107653496,LOC107750956,LOC107702599,LOC107710008,LOC106568589 coding upstream 678674 21974507 ~ 22038937 (-)
G178157 NA non-coding downstream 26508 21256649 ~ 21265014 (-)
G178134 NA non-coding downstream 449148 20842047 ~ 20842374 (-)
G178096 NA non-coding downstream 573457 20717753 ~ 20718065 (-)
G178090 NA non-coding downstream 675511 20615802 ~ 20616011 (-)
G178086 NA non-coding downstream 709810 20579704 ~ 20581712 (-)
G178195 NA non-coding upstream 179397 21475230 ~ 21475642 (-)
G178201 NA non-coding upstream 219755 21515588 ~ 21515985 (-)
G178236 NA non-coding upstream 520294 21816127 ~ 21816402 (-)
G178237 NA non-coding upstream 536908 21832741 ~ 21832989 (-)
G178251 NA non-coding upstream 629659 21925492 ~ 21927360 (-)
LOC111194984 sh2d4a other downstream 1552209 19738649 ~ 19739313 (-)
LOC103035567 LOC103035567,LOC108425166 other downstream 2163399 19119786 ~ 19128123 (-)
G177704 NA other downstream 2199376 19091146 ~ 19092146 (-)
LOC103029522 LOC103029522,LOC107746207,LOC108440152,LOC107689072,LOC107658587,LOC107583405,LOC107758669,LOC106564675,LOC105890914 other downstream 2356922 18887028 ~ 18934600 (-)
LOC111195059 NA other downstream 2672910 18614892 ~ 18618612 (-)
G178267 grin3a,LOC107710005,LOC107750958 other upstream 637686 21933519 ~ 21933831 (-)
G178426 NA other upstream 1159664 22455497 ~ 22456779 (-)
LOC103023660 LOC103023660,LOC108440734,LOC108276836,LOC106926931 other upstream 1205485 22501318 ~ 22509783 (-)
G178450 NA other upstream 1376299 22672132 ~ 22672683 (-)
LOC111195067 NA other upstream 1639657 22935490 ~ 22941664 (-)

Expression


Co-expression Network