G178426


Basic Information

Item Value
gene id G178426
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 22455497 ~ 22456779 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU241733
ACCATATCCAGGTGAAGGGATGAGCTCTGGGGATGAGCTGCAGCGCGTACACGGCGGCGAGGTGCAGCAAAGCCATCAGCACCACGTTTCTCCATACGATGGTCTGACCGCGCTTCTCCTCTTTAGCATCCCCGCATTCAGCCTCCGTCTCCCGGCTCTCCGCTCCCTCAGGCTCGCAGCGGCCGCCGGCAGCGGCGCGGAGCTCGCTCTTCGGGAACGCGACCATTTCTTCAGCAAGAAAAGAGGATTTTTAATCTCCACTACCGATTTAAAGGGAAATCTGTGGGTTTATATCCATACAGGACCCGGCAGCTGAGAGCTGGAGCTGCTGGCCTGGGTCTCCGGGGGATGGATGGAGGCTGAGCCGCTGCAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241733 True 374 TUCP 0.60 2 22455497 22456779

Neighbor

gene id symbol gene type direction distance location
snx30 snx30,LOC107569385 coding downstream 78565 22343456 ~ 22376932 (-)
plppr1 plppr1,LOC107653496,LOC107750956,LOC107702599,LOC107710008,LOC106568589 coding downstream 416560 21974507 ~ 22038937 (-)
LOC111194991 NA coding downstream 532482 21922330 ~ 21923015 (-)
epha5 epha5,LOC108428864,LOC107702602 coding downstream 789771 21545217 ~ 21665726 (-)
LOC103045065 lpar1,LOC107554848,LOC107723319 coding downstream 1032252 21389227 ~ 21423245 (-)
enoph1 enoph1,LOC107702573,LOC107715850,LOC102782295 coding upstream 21934 22478713 ~ 22484769 (-)
trnam-cau_23 NA coding upstream 73829 22530608 ~ 22530679 (-)
trnam-cau_24 NA coding upstream 74045 22530824 ~ 22530895 (-)
trnam-cau_25 NA coding upstream 74261 22531040 ~ 22531111 (-)
trnar-ccu_29 NA coding upstream 74339 22531118 ~ 22531190 (-)
G178409 sec31a non-coding downstream 1878 22445592 ~ 22453619 (-)
G178423 sec31a non-coding downstream 14103 22439163 ~ 22441394 (-)
LOC111195068 NA non-coding downstream 59291 22385505 ~ 22396206 (-)
G178405 NA non-coding downstream 101186 22353874 ~ 22354311 (-)
G178309 NA non-coding downstream 120841 22333622 ~ 22334656 (-)
G178427 NA non-coding upstream 3876 22460655 ~ 22462274 (-)
G178416 hnrnpdl,LOC107715891,LOC107702595,LOC107653490 non-coding upstream 30066 22486845 ~ 22491505 (-)
G178417 hnrnpd,LOC108440733,LOC108276832,LOC107702593 non-coding upstream 36677 22493456 ~ 22499247 (-)
G178436 NA non-coding upstream 54270 22511049 ~ 22547980 (-)
G178440 NA non-coding upstream 58882 22515661 ~ 22523609 (-)
G178267 grin3a,LOC107710005,LOC107750958 other downstream 521666 21933519 ~ 21933831 (-)
G178173 NA other downstream 1159664 21291522 ~ 21295833 (-)
LOC111194984 sh2d4a other downstream 2716184 19738649 ~ 19739313 (-)
LOC103035567 LOC103035567,LOC108425166 other downstream 3327374 19119786 ~ 19128123 (-)
G177704 NA other downstream 3363351 19091146 ~ 19092146 (-)
LOC103023660 LOC103023660,LOC108440734,LOC108276836,LOC106926931 other upstream 44539 22501318 ~ 22509783 (-)
G178450 NA other upstream 215353 22672132 ~ 22672683 (-)
LOC111195067 NA other upstream 478711 22935490 ~ 22941664 (-)
sh2d4a sh2d4a other upstream 488382 22945161 ~ 22957226 (-)
G178982 hint1,LOC107665476 other upstream 2674203 25130982 ~ 25134156 (-)

Expression


Co-expression Network