G178809


Basic Information

Item Value
gene id G178809
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 24150304 ~ 24169991 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU242230
ataaaaaagtctctggaatataatcaagaggaagacggatgatcacaagccatcaaaccaaactgaactgcttggatttttgcatcaggagtaaaggcataaagttatccaaaagcagtgtgtaagactggtggaggagaacatgatgccaagatgcatgaaaactgtgattaaaaaacagggttattccaccaaatattgattaatgaactc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU242230 True 213 lncRNA 0.37 2 24150304 24169991

Neighbor

gene id symbol gene type direction distance location
LOC103038694 LOC108427265,LOC108277159 coding downstream 71938 23706701 ~ 24078366 (-)
ubxn8 NA coding downstream 628668 23515252 ~ 23521636 (-)
wrn NA coding downstream 696608 23411183 ~ 23453696 (-)
nrg1 nrg1 coding downstream 746829 23256525 ~ 23403475 (-)
ddx4 ddx4,LOC107740783,LOC107670045,LOC107715859,LOC107665473 coding downstream 1242930 22899476 ~ 22907374 (-)
apbb1 apbb1 coding upstream 47181 24217172 ~ 24231664 (-)
LOC103022888 NA coding upstream 64931 24234922 ~ 24249982 (-)
LOC103023192 LOC108424566,LOC108277262,LOC105901058,LOC106603267,LOC105010780 coding upstream 82143 24252134 ~ 24289293 (-)
aldh7a1 aldh7a1 coding upstream 319807 24489798 ~ 24500429 (-)
LOC103023834 LOC108424422 coding upstream 341840 24511831 ~ 24516598 (-)
G178777 NA non-coding downstream 19960 24130050 ~ 24130344 (-)
G178775 NA non-coding downstream 93448 24052788 ~ 24056856 (-)
G178758 NA non-coding downstream 427405 23722138 ~ 23722899 (-)
G178686 NA non-coding downstream 613601 23530994 ~ 23536703 (-)
G178673 ppp2cb,LOC107758729 non-coding downstream 635596 23503354 ~ 23514708 (-)
LOC111195074 NA non-coding upstream 27210 24197201 ~ 24198148 (-)
G178823 NA non-coding upstream 121901 24291892 ~ 24293344 (-)
G178855 gramd3 non-coding upstream 302441 24472432 ~ 24477519 (-)
G178859 phax non-coding upstream 335074 24505065 ~ 24509510 (-)
G178862 lmnb1 non-coding upstream 354939 24524930 ~ 24542747 (-)
sh2d4a sh2d4a other downstream 1193078 22945161 ~ 22957226 (-)
LOC111195067 NA other downstream 1208640 22935490 ~ 22941664 (-)
G178450 NA other downstream 1477621 22672132 ~ 22672683 (-)
LOC103023660 LOC103023660,LOC108440734,LOC108276836,LOC106926931 other downstream 1640521 22501318 ~ 22509783 (-)
G178426 NA other downstream 1693525 22455497 ~ 22456779 (-)
G178982 hint1,LOC107665476 other upstream 960991 25130982 ~ 25134156 (-)
LOC103025094 zgc:171929,LOC107690845,LOC107575147,LOC107671611,LOC105905449 other upstream 1033334 25203325 ~ 25207386 (-)
thsd1 thsd1 other upstream 1123684 25293675 ~ 25303083 (-)
LOC103043022 LOC108410630,LOC107556853 other upstream 1193941 25363932 ~ 25472244 (-)
LOC103047293 LOC108410718,LOC106581537 other upstream 1486264 25656255 ~ 25864474 (-)

Expression


Co-expression Network