Gene
RNA
| Item | Value |
|---|---|
| gene id | G178896 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035916.1 |
| NCBI id | CM008319.1 |
| chromosome length | 36262418 |
| location | 24795483 ~ 24817313 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| description |
|---|
| CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU242389 | True | 801 | lncRNA | 0.36 | 2 | 24795483 | 24817313 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ctxn3 | ctxn3,LOC107711251 | coding | upstream | 56008 | 24726077 ~ 24739475 (+) |
| prrc1 | prrc1,LOC107572184,LOC107705848,LOC107673757 | coding | upstream | 96358 | 24684077 ~ 24699125 (+) |
| megf10 | megf10,LOC107705845 | coding | upstream | 119437 | 24603656 ~ 24676046 (+) |
| LOC103034699 | NA | coding | upstream | 198888 | 24590973 ~ 24596595 (+) |
| lmnb1 | lmnb1 | coding | upstream | 253233 | 24524813 ~ 24542250 (+) |
| LOC103037195 | slc27a6,LOC108277201 | coding | downstream | 166470 | 24983783 ~ 25016698 (+) |
| isoc1 | isoc1 | coding | downstream | 213648 | 25030961 ~ 25042920 (+) |
| chsy3 | chsy3 | coding | downstream | 238534 | 25055847 ~ 25127123 (+) |
| hint1 | hint1,LOC107665476 | coding | downstream | 313912 | 25131225 ~ 25134155 (+) |
| dact3 | NA | coding | downstream | 320580 | 25137893 ~ 25158281 (+) |
| G178873 | NA | non-coding | upstream | 116820 | 24658407 ~ 24678663 (+) |
| LOC111195077 | NA | non-coding | upstream | 195872 | 24598873 ~ 24599611 (+) |
| G178853 | NA | non-coding | upstream | 207848 | 24586507 ~ 24587635 (+) |
| G178844 | NA | non-coding | upstream | 282275 | 24512588 ~ 24513208 (+) |
| LOC111195075 | NA | non-coding | upstream | 493636 | 24298112 ~ 24301847 (+) |
| G178928 | NA | non-coding | downstream | 143985 | 24961298 ~ 24962524 (+) |
| G178938 | NA | non-coding | downstream | 205727 | 25023040 ~ 25023262 (+) |
| LOC111195079 | NA | non-coding | downstream | 206830 | 25024143 ~ 25029674 (+) |
| G178981 | NA | non-coding | downstream | 316927 | 25134240 ~ 25135395 (+) |
| G178985 | NA | non-coding | downstream | 318171 | 25135484 ~ 25135994 (+) |
| LOC103032894 | LOC108424565 | other | upstream | 340861 | 24447792 ~ 24454622 (+) |
| G178485 | NA | other | upstream | 1830494 | 22963447 ~ 22964989 (+) |
| G178388 | hmgcs1,LOC108427280,LOC108277226,LOC107737058 | other | upstream | 2085926 | 22689001 ~ 22709557 (+) |
| G178352 | NA | other | upstream | 2249353 | 22544640 ~ 22546130 (+) |
| LOC103022948 | hnrnpd,LOC108440733,LOC108276832,LOC107702593 | other | upstream | 2293324 | 22493440 ~ 22502159 (+) |
| smpd1 | smpd1,LOC107718723,LOC107720657,LOC107556869 | other | downstream | 426848 | 25244161 ~ 25257469 (+) |
| LOC103024073 | LOC108424537 | other | downstream | 2013324 | 26830637 ~ 26879083 (+) |
| rnasek | rnasek,LOC107554319 | other | downstream | 2096437 | 26913750 ~ 26916344 (+) |
| LOC103038954 | zgc:101846,LOC106525086,LOC108416226,LOC101161532 | other | downstream | 2706989 | 27524302 ~ 27525441 (+) |
| G180235 | erg | other | downstream | 6322031 | 31139344 ~ 31151095 (+) |
