G179816


Basic Information

Item Value
gene id G179816
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 28850690 ~ 28851105 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU243597
cagagtgtgaaggttcagttagcagggtaagagcacagttttgctcaaaatattgcaatgcacacaacattatgggtgacataccagagttcaaaagaggacaaattgttggtgcacgtcttgctggcgcatctgtgaccaagacagcaagtctttgtgatgcatcaagagccatggtatccagggtaatgtcagcacaccaccaagaaggacgaaccgcatacaacaggattaactgtggacgctgtaagaggaagctgtctgaaagggatgttcgggtgctaacccggattgtatccaaaaaatataaaaccatggctgctcaagtcacggcagaattcaatgtgcacctcaactctcctgtttccaccagaactgtccgtcaccacaataaattattgtggtataaaaccagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU243597 True 416 TUCP 0.45 1 28850690 28851105

Neighbor

gene id symbol gene type direction distance location
LOC103039144 LOC108423784,LOC108277316 coding downstream 280585 28411012 ~ 28570105 (-)
LOC103041089 lim2.1,LOC103041089,LOC108423752,LOC107579014 coding downstream 1244407 27600092 ~ 27606283 (-)
bsx bsx,LOC107747047 coding downstream 1256166 27591571 ~ 27594524 (-)
zpr1 zpr1,LOC107693980,LOC107747003,LOC107751399,LOC107577081 coding downstream 1310980 27528660 ~ 27539710 (-)
LOC103027279 NA coding downstream 1332128 27511131 ~ 27518562 (-)
panx3 panx3,LOC107747045,LOC107686209,LOC107589683,LOC107579026,LOC107691702 coding upstream 88486 28939591 ~ 28949916 (-)
pknox2 pknox2,LOC107691639,LOC106567647,LOC106603668 coding upstream 102934 28954039 ~ 28998439 (-)
robo3 robo3,LOC107751391,LOC107577175 coding upstream 307935 29159040 ~ 29364276 (-)
picalm picalm,LOC107744613 coding upstream 721549 29572654 ~ 29628399 (-)
cblb cblb,LOC107693962,LOC107576804,LOC107747038 coding upstream 1427991 30279096 ~ 30419086 (-)
G179779 NA non-coding downstream 1946 28659992 ~ 28848744 (-)
G179815 NA non-coding downstream 3212 28847119 ~ 28847478 (-)
G179814 NA non-coding downstream 6715 28843700 ~ 28843975 (-)
G179766 NA non-coding downstream 195942 28654522 ~ 28654748 (-)
G179764 NA non-coding downstream 196802 28653671 ~ 28653888 (-)
G179842 NA non-coding upstream 61064 28912169 ~ 28912471 (-)
G179843 NA non-coding upstream 64183 28915288 ~ 28933142 (-)
G179844 NA non-coding upstream 65577 28916682 ~ 28917062 (-)
G179845 NA non-coding upstream 100359 28951464 ~ 28951680 (-)
G179837 NA non-coding upstream 102944 28954049 ~ 29088595 (-)
G179578 LOC108423781,LOC107751398,LOC107693988,LOC107577128,LOC107691633,LOC107588586 other downstream 1283998 27561845 ~ 27566692 (-)
G179583 zgc:101846,LOC106525086,LOC108416226,LOC101161532 other downstream 1325302 27524328 ~ 27525388 (-)
LOC103038646 zgc:194989,hist2h2l,LOC107719244,LOC107667924,LOC107574861,LOC108277172,LOC105900366,LOC103356012 other downstream 1326555 27523131 ~ 27524135 (-)
ift46 ift46 other downstream 1372712 27470086 ~ 27477978 (-)
G179569 NA other downstream 1407374 27440231 ~ 27443316 (-)
G180188 dyrk1a,LOC108411986,LOC107572954 other upstream 2095841 30946946 ~ 30957767 (-)
LOC103030555 LOC108423819,LOC107701125,LOC107718772,LOC107720543,LOC107556862,LOC107693906 other upstream 3043097 31894202 ~ 32071924 (-)
tmem135 tmem135,LOC107701128,LOC107718730 other upstream 3389074 32240179 ~ 32262598 (-)
tiam1 tiam1,LOC108423828,LOC107718732 other upstream 3585220 32436325 ~ 32584343 (-)
LOC103033173 NA other upstream 4954135 33805240 ~ 33855632 (-)

Expression


Co-expression Network