tmem135 (tmem135,LOC107701128,LOC107718730)


Basic Information

Item Value
gene id tmem135
gene name tmem135,LOC107701128,LOC107718730
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 32240179 ~ 32262598 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU244539
ATGGCCGCTCTCAGCAAGTCCATACCGCACAGCTGCTATGAGATTGGCCACACTTGGAGTACATCATGTCCTCTCTCAACACTGCAGGTGACAGCCGGCGCCCTGGAGGTCTCGTTCAAGATCTACGCGCCGCTGTATcttATTGCTGCCATCctaagaagaaggaaaaaagactACTACAAGAAGAGGCTAATCCCTGAGATCCTGCAGTCTACATCCTTTCTGACTGCAAATGGAGGCCTGTACATTGCCTTTTTCTGCATACTTAGGAAGCTTTTGGGTGGTTTCAACTCCTGGTCTGCAGGCTTTGGAGCTGCACTGCCCGCTTCATACATTGCTATTCTCATAGAGCGCAAAAGCAGGAGAGGACTTCTAACAATATATATGGCAAATCTGgcCACTGAGACAATATTCCGGATGGCTGTCTCGCGAGGCTATGTTAATCCTCTAAAACATGGAGAGGTTCTACTCTTCTGCCTGACTGCATCACtttacatgtttttcttcagATGTAAAGATGGACTTAAGGGCTTTGCTTTTTCAGCACTAAAGTTTAttgtaggaaaggaggagatcCCCACACATTCCTGCCAGGCTGAGCTCGCCAGTGCTTCTCGCTCAGAGAGGGGAGCAGTGCTACCCGGTCATCAGCCAGAGGAGGAACAGGCTTCATCTCGAGGGAGGGGCATTGCTGCCTTGACCCGCAGGCTGCTAGACACTCTATGCAAACATGGACCCAGACACAGATGCTGCAAACACTACCAAGACAACTGCATCTCCTACTGTGTTAAGTGCTTCATCCTCaggcctttctctctgtctgcttCCACAGAGAGCTCTCTGTCTCAGCTCATCTATCAGGCTGCATTCCTCACAGACCTCCTGgaaagactgtgtgtgtatggtgg
>XM_022680727.1
GTGGAGTCCCAAGTCTTCAGTAAACATGGCCGCTCTCAGCAAGTCCATACCGCACAGCTGCTATGAGATTGGCCACACTTGGAGTACATCATGTCCTCTCTCAACACTGCAGGTGACAGCCGGCGCCCTGGAGGTCTCGTTCAAGATCTACGCGCCGCTGTATcttATTGCTGCCATCctaagaagaaggaaaaaagactACTACAAGAAGAGGCTAATCCCTGAGATCCTGCAGTCTACATCCTTTCTGACTGCAAATGGAGGCCTGTACATTGCCTTTTTCTGCATACTTAGGAAGCTTTTGGGTGGTTTCAACTCCTGGTCTGCAGGCTTTGGAGCTGCACTGCCCGCTTCATACATTGCTATTCTCATAGAGCGCAAAAGCAGGAGAGGACTTCTAACAATATATATGGCAAATCTGgcCACTGAGACAATATTCCGGATGGCTGTCTCGCGAGGCTATGTTAATCCTCTAAAACATGGAGAGGTTCTACTCTTCTGCCTGACTGCATCACtttacatgtttttcttcagATGTAAAGATGGACTTAAGGGCTTTGCTTTTTCAGCACTAAAGTTTAttgtaggaaaggaggagatcCCCACACATTCCTGCCAGGCTGAGCTCGCCAGTGCTTCTCGCTCAGAGAGGGGAGCAGTGCTACCCGGTCATCAGCCAGAGGAGGAACAGGCTTCATCTCGAGGGAGGGGCATTGCTGCCTTGACCCGCAGGCTGCTAGACACTCTATGCAAACATGGACCCAGACACAGATGCTGCAAACACTACCAAGACAACTGCATCTCCTACTGTGTTAAGGTAAGTGTGTTTTCCAATTTGCTTCTACTGTATTTCCAAACTGTCTGCCTTTCATTTGTTTCTgtgttaaaagtttttttgCATTTATGCATTAGCATGTCGTTGTTGCCTTGTGTTGTTTCAGGCTTTCTCGCTGGCATGTCCATGTTCTTCTATAAGAGCACCACCATCTCAATGTACCTCTTCTCTAAGCTGGTGGAGACCATGTACTTCAAAGGCATTGAGGCAGGACGCTTCCCCTACTTCCCTGAAGCTGACACAGTAATCTACGCCATCTCTACTGCTATCTGCTTCCAGGCGGCGGTGATGGAAGTTCAGAATCTGAGGCCATCTTACTGGAAGTTTCTGCTGCGGCTGACCAAGGGCAGGTTCGCTCTGATGAACAGAAAAGTACTTGATGTGTTTGGGACGGAGGCATCTAAACACTTTAAAGGCTTCACCCCCAAACTGGACCCCAAATACATGCTGGTGCCTCCAGGTGTGGACGTGGCGCTGAGTTAATGGACCAGGCTGACCTCCCTCTGCTGTGATGCGCTTAGCCAGAGACCCAAATATGTGAGAGTGgagacactctctctctctctctctctctctctctctcacttcaaTCTACAACCTGTAATGTGAATGGCATCGCTTTGGTTGAGAGCGTAGCGTTTCTGGTGTCGCACTAAAGCAGTATTATATGTTCATATTCACTTTTAACTGCTGGGCGTTAAGAAGAATAAGTTCTTGGAAGAGATAatggctatgttcacacagcaggtgaaaGTGGTACAAATCCAATTTTCTCAGcaaatctgatgtttattttaggCTGTTTTCACTATATTTTTTCACTATAATGTGACTGATATCTAACATTTGTGTG

Function

symbol description
tmem135 Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in female organism. Orthologous to human TMEM135 (transmembrane protein 135).

NR:

description
PREDICTED: transmembrane protein 135

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244539 False 908 TUCP 0.50 10 32240179 32262573
XM_022680727.1 True 1688 mRNA 0.47 13 32245007 32262598

Neighbor

gene id symbol gene type direction distance location
LOC103041136 LOC108423765 coding downstream 133268 32100201 ~ 32106911 (-)
LOC103041448 kpna7,LOC103041448,LOC108423764,LOC108277302,LOC107693907,LOC107720648,LOC107556882 coding downstream 143379 32090689 ~ 32096800 (-)
LOC103030874 mtnr1bb,LOC103030874,LOC108423763,LOC107720651,LOC107693905,LOC108276622,LOC105890457 coding downstream 392210 31761901 ~ 31847969 (-)
LOC103041957 NA coding downstream 698704 31519076 ~ 31541475 (-)
LOC111195087 NA coding downstream 730958 31499084 ~ 31509221 (-)
cct8 cct8,LOC107693911,LOC107701129 coding upstream 2399 32264997 ~ 32276777 (-)
LOC103038234 grik1,grik1a,LOC107701130,LOC107693913,LOC107718733,LOC107555187 coding upstream 80741 32343339 ~ 32428813 (-)
sod1 sod1,LOC106604042 coding upstream 388720 32651318 ~ 32658440 (-)
scaf4 scaf4,LOC106950580,LOC106934797 coding upstream 398618 32661216 ~ 32680718 (-)
LOC103035536 NA coding upstream 509207 32771805 ~ 32848226 (-)
G180543 NA non-coding downstream 31610 32205121 ~ 32208569 (-)
G180454 chordc1 non-coding downstream 160355 32077364 ~ 32079824 (-)
G180366 NA non-coding downstream 480741 31758098 ~ 31759438 (-)
G180373 NA non-coding downstream 497189 31742731 ~ 31742990 (-)
G180344 NA non-coding downstream 603631 31636347 ~ 31636548 (-)
G180540 NA non-coding upstream 976 32263574 ~ 32264739 (-)
G180562 NA non-coding upstream 59503 32322101 ~ 32326822 (-)
G180570 NA non-coding upstream 193948 32456546 ~ 32457411 (-)
G180576 NA non-coding upstream 291981 32554579 ~ 32558540 (-)
G180577 NA non-coding upstream 293234 32555832 ~ 32557530 (-)
LOC103030555 LOC108423819,LOC107701125,LOC107718772,LOC107720543,LOC107556862,LOC107693906 other downstream 168255 31894202 ~ 32071924 (-)
G180188 dyrk1a,LOC108411986,LOC107572954 other downstream 1282412 30946946 ~ 30957767 (-)
G179816 NA other downstream 3389074 28850690 ~ 28851105 (-)
G179578 LOC108423781,LOC107751398,LOC107693988,LOC107577128,LOC107691633,LOC107588586 other downstream 4673487 27561845 ~ 27566692 (-)
G179583 zgc:101846,LOC106525086,LOC108416226,LOC101161532 other downstream 4714791 27524328 ~ 27525388 (-)
tiam1 tiam1,LOC108423828,LOC107718732 other upstream 173727 32436325 ~ 32584343 (-)
LOC103033173 NA other upstream 1542642 33805240 ~ 33855632 (-)
LOC103042595 LOC106931471,LOC106940241,LOC106603438,LOC107659943,LOC101067200 other upstream 3170634 35433232 ~ 35470789 (-)

Expression


Co-expression Network