G180710


Basic Information

Item Value
gene id G180710
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 33106586 ~ 33106803 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU244758
tttctctgcgctagaaatgcgcactctctctgcttttagactctttgccccgtttttctgcgctagaaatgcgcactctctccgcttttagactctttggcccgtttctgacacctagcgttcaaactttgaatctcacattataaaaacctgcttaacagcgggccaactttcattctatttctaaaatacctcgcaggccgctccaaaaaaggaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244758 True 218 lncRNA 0.44 1 33106586 33106803

Neighbor

gene id symbol gene type direction distance location
LOC103036259 NA coding upstream 397332 32704931 ~ 32709254 (+)
LOC103029275 NA coding upstream 415102 32687753 ~ 32691484 (+)
LOC111195090 NA coding upstream 456254 32643512 ~ 32650332 (+)
bach1 NA coding upstream 783638 32306457 ~ 32322948 (+)
map3k7cl map3k7cl coding upstream 807641 32281279 ~ 32298945 (+)
LOC103028331 frem2,frem2a,LOC107720635,LOC107701139,LOC108276566,LOC107555183 coding downstream 3188 33109991 ~ 33275686 (+)
LOC107197579 trim47,LOC108423837,LOC107701143,LOC107718738,LOC107557227,LOC107720633 coding downstream 179632 33286435 ~ 33297195 (+)
synj1 NA coding downstream 751873 33858676 ~ 33905991 (+)
c20h21orf59 c10h21orf59,cunh21orf59,LOC103033817,LOC107691672,LOC105907446 coding downstream 804421 33911224 ~ 33918741 (+)
mis18a NA coding downstream 854153 33960956 ~ 33967651 (+)
G180708 NA non-coding upstream 52 33106183 ~ 33106534 (+)
G180698 NA non-coding upstream 47544 33057950 ~ 33059042 (+)
G180686 NA non-coding upstream 70225 33036051 ~ 33036361 (+)
G180643 NA non-coding upstream 139044 32967211 ~ 32967542 (+)
G180642 NA non-coding upstream 142326 32963941 ~ 32964260 (+)
G180722 NA non-coding downstream 146479 33253282 ~ 33280927 (+)
G180726 NA non-coding downstream 174854 33281657 ~ 33283041 (+)
G180734 NA non-coding downstream 207707 33314510 ~ 33314931 (+)
G180746 NA non-coding downstream 266771 33373574 ~ 33395329 (+)
G180804 NA non-coding downstream 359767 33466570 ~ 33466780 (+)
ufm1 ufm1,LOC107701138 other upstream 38654 33050242 ~ 33067932 (+)
G180460 cct8,LOC100304907,LOC107693911,LOC107701129 other upstream 832788 32264998 ~ 32273798 (+)
G180266 NA other upstream 1672677 31433198 ~ 31433909 (+)
G180235 erg other upstream 1955491 31139344 ~ 31151095 (+)
LOC103038954 zgc:101846,LOC106525086,LOC108416226,LOC101161532 other upstream 5581145 27524302 ~ 27525441 (+)
LOC103026201 LOC108277347,LOC108423746,LOC106604019 other downstream 1066121 34172924 ~ 34328970 (+)
LOC103024954 LOC108423745 other downstream 1227773 34334576 ~ 34507324 (+)
nsun5 nsun5,LOC102793237,LOC107686168 other downstream 2285718 35392521 ~ 35403624 (+)
LOC107197592 NA other downstream 2493680 35600483 ~ 35607593 (+)
LOC103044041 NA other downstream 2578201 35685004 ~ 35702995 (+)

Expression


Co-expression Network