G69154


Basic Information

Item Value
gene id G69154
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 577984 ~ 579539 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU78860
TAAGTATTCCAATTTATAGCGTGCCACAAATACATTTAGTTATGCTCAAGTACATACGAATAAAGTGTGCTTAAGTATACTATTTTTTCACCAGGGTCAATTAACTTGCTTTGTATTTTTTTTTTTAAGTTTTTTTTTTTTTTTTTAAGTTTTTTTTTGGCCTGTAAGGGAGTGACCTTCCCCACAGGCCCATTTTCTACAGAACTGTCCTAAAACAAGACAACTTTTGAAAAATATTAAGACAGCGGTGCAATCTTAACATTACATAATATGACACAGCAGGACGCATACAAAATACTCCAGAAATCATATTTCTGTATCCTCAAGTTTGGTTAAAACATTTGTAGACATAGCTTGCTTGCATGACAGCAGTACAAAAACACAAAGTGAAAGACTATTGCCTTATCTACTGGTTGTCTTATTGTTGTGGGCTTTGTATAGGGTGAGGGCTATTTGTTATAATACACAAGAGAGCTTAGTGGAAAATTACAAATGGGTCGTTGCCTTACATCCAAGCCACACTGGCTGAGTTTTTGGCCCCGGTAAGTAAATTATCATTTTCGGCCCATATTTTAATAAAGTGAGCTGTCTGCTCCTTGTTCTCTAAAACAAAGATATTAGAACAAGTTTTGCCTCAGACCATGCAGTACTAGCACTTCTATATTGTAGTCTTTAGAGTACCCTCACTTTTTCTTGCATACCAGCACTTCTGCATGTTGTCGGTACTCTGACTGCCCCGCCCCCAGAACGCGATTTCAACTGAGGTGGAACCTAAACTCTCTCACTCCACTGTATCTCCATTCACAATATTCCGTGGCTGCAGTCTATCAGAGTGTTTTCTCAACTTGCTATTGAGATCTAAAAAATTGAAGTAATTGTCCAAAAGAACTGTTTGTTCCTGATCTTGCTGTTCTAGGATCATCAAACTGTGTTTGTGCAACAGGATGAGAGCTCAGTTTAATAGATCAATCATTATGTCAAGTTTCAGTGCTAAAGAGTTTAGAAATAGCAACAGCTTTGCAGAATACTCATATAGTATCAGAGTGCCATCTAGTGGTGGTCTTGCCTGTCAAATTCATATATCCAGTGCTTAATCAACAGGATAATAGTGATCCAAGAAATAATGCATCAAAAATCAAAAATCATTTAGGAGGCACTGTTATGTGTCATGAGGCGAAAAGAAGACTAATCAACAGCTACAACTCTAAAAGAGAAGTCACAGCAGGGCTGGTGTCAGAGCTGATGTAATGTCCCAAGTGAACCCTGAAAGCACCAAAACAAATAAACCAGTTGATAGTGGCAGACAGAGGTTAAGAGTATGGAAGGGTCAGACAGGGCTATGAGTAATGAAGAGTTAGACCCACAAACTCTTCTAACACTGAACTATACGTGGCCTTAAACTCTCAGTAAACCCTTACTGTGGTAGAACCACGGTACAGATGGTAACAGATGGCAGTACTATAGTACTGAATGATTAATATGTTCACATACATGGTACTCCACCTTGATGTAAAATTCAAGTTTATAAAACAACATGGTATTCTCAAGTGTAAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78860 True 1556 lncRNA 0.38 1 577984 579539

Neighbor

gene id symbol gene type direction distance location
CI01000012_00520655_00552630 NA coding downstream 24164 520139 ~ 553820 (-)
CI01000012_00427641_00472235 NA coding downstream 105407 427573 ~ 472577 (-)
CI01000012_00382850_00384215 NA coding downstream 193558 381711 ~ 384426 (-)
CI01000012_00340814_00363240 HAAO coding downstream 214744 340665 ~ 363240 (-)
CI01000012_00260363_00261340 HCAR1-3 coding downstream 316476 260296 ~ 261508 (-)
CI01000012_00647774_00648451 NA coding upstream 68047 647586 ~ 648945 (-)
CI01000012_00686760_00686993 NA coding upstream 106982 686521 ~ 686993 (-)
CI01000012_00689933_00695237 NA coding upstream 109555 689094 ~ 695264 (-)
CI01000012_00863269_00864644 NA coding upstream 282501 862040 ~ 865072 (-)
CI01000012_00866804_00867133 NA coding upstream 286446 865985 ~ 867133 (-)
G68623 NA non-coding downstream 50678 526939 ~ 527306 (-)
G68644 NA non-coding downstream 60119 517658 ~ 517865 (-)
G68639 NA non-coding downstream 74182 503594 ~ 503802 (-)
G68638 NA non-coding downstream 76036 501422 ~ 501948 (-)
G68636 NA non-coding downstream 78903 498833 ~ 499081 (-)
G69157 NA non-coding upstream 3255 582794 ~ 583234 (-)
G69193 NA non-coding upstream 47803 627342 ~ 627685 (-)
G69222 NA non-coding upstream 78428 657967 ~ 658208 (-)
G69223 NA non-coding upstream 79638 659177 ~ 659462 (-)
G69224 NA non-coding upstream 82220 661759 ~ 662263 (-)
G69150 NA other downstream 11028 565463 ~ 566956 (-)
CI01000012_00178282_00181473 NA other downstream 398022 178182 ~ 183012 (-)
G69161 NA other upstream 8065 587604 ~ 588015 (-)
G69277 NA other upstream 150381 729920 ~ 730465 (-)
G69332 NA other upstream 195825 775364 ~ 775879 (-)
CI01000012_01139864_01192154 TTC7A other upstream 556137 1135676 ~ 1192154 (-)
G69562 NA other upstream 752536 1332075 ~ 1376298 (-)

Expression


Co-expression Network