G181424


Basic Information

Item Value
gene id G181424
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 35542348 ~ 35544216 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU245677
ATGAAAATCATGTTCAAGTGGGTTAAAGCCAGGTGGCTGACTCGGCCATTAACAAACATTACATTTCTTTGGCTTGAGACACTTTTTGCTCTTTCTGCTTTTTTGGgcaattatacatatatacagtgtagTGCTGCTCAGCATTAAGATCTATACACTTCAGAATCCATCCTGCTGCTTGTATTAGTTGACACATCTAATAGTAAACACCAGTGACCCAGTTTCACTTGCAGCCATGTAAGCCCATGCTGCAACAGTGCTGTCAGCATGTTTGATAGATGACTTGGTGTGCTTCAGTTCAGATTATGAACCCTTCCTTTGCTTTCCCATACACTAGTTAATCTTGTTTTTATCTATCCAAAGACAAATTGTGTGACATGGCTTGAATTTGACTTTGACAATGATGTGCCAACCTCCTCTAGAATGTTCTTGACCAGACTAAATGCACTTTGTGTAAGCGAAATTCGGTGAATTCTGCGATTATTAACCTTAAAAAGGGGCTTTAGAGGTATTCTTGGTTTTCTGACGTGGCTGATGTTTGCCAGTGCAGTACTGTCTTTGAAGAATAAACTAAATACTCCTGTAATTTCTACAATCTTACTTATAGGTTTGTTTtgcctttatgtttttttttttctaggccTTGCTTACATTATCATCACTTTGGACCGGATTTTGAAAGTTCCTATGAACAAATACCAAGTGCACATTTAGAATTAACTCCAGTTCTTCTATTTTGTTCCAATTTGTCACTGTATAATGTGAAAACAGGCCACACCTATCCATAAAACTgttcataaatacattttcgCATAATTTTGAGCCCAAAAAGACAGAACGTATGGATTTGACTGTATAtctgcacacaTAACTCAGAAATCCTCTTTTGTAATATACCCCCACTTTAAAAAGGAATATAAactaatttgtaaaaaaaaaaaaaaaacactttataaatgCAGAAGCACCTGTAGTAACTGTACTTTAACCTTTTCAGTCACATATCACTTCCAACCAgcaataaagtgtttttaaaaattcaactagAAATACAAAACAGGCTTTAGATTAAAAAAGCAAGACAGTACTTGCATAAAAAACAGAGAATTAACTTATGCCAAATTTTTTGTTAATAACTGAGAAATCTGTAACCTGAAACCTGAGTTGGAGAAGGTCCTGCTCAGGACTGAGGAGAAGAACCAGGGCTTCAGGTTTCTGTTCAGATTTAATGTCCATAGCTGGTAGGTCCAGAAGGCAgcacagaagcagcagcagcaggctgtGAGAGGGTCTGTAAGTGAGGAGATTGAGAGCCTGACTGTACCGTTACCTGTGGCAGGTTAACAAAAGACTGTGCATCCATGTTTACAGGAGGGCTGAAATGAGAATGGGCATGGGAAGCCACTGGAGTCCAAGAACTGCTGGTCTGATGCTGATGACTGTGTCCATGAGAATGCCCACAGGCATGCCCACCATGGCTGTGTCCGTGGCTAGATCCAACACTGTGCCCGATACCATACCCAGAGTACGGTGAAGGCACCGTGTAGTTCTGCTGAGCGTAGGCTGCGTAGGGCCAGCCGTCTAGACTGCTGGGTAGACTTCCTGGAGCTTGAGGAGGGGACATCGGTGCTGGAGCATAGGCCTGAACAGGGTATGAGCCTGGCGGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245677 True 1669 lncRNA 0.41 2 35542348 35544216

Neighbor

gene id symbol gene type direction distance location
LOC103023494 LOC107577900,LOC108442441 coding upstream 557 35518171 ~ 35541791 (+)
LOC103023179 tmem120a,LOC108276692,LOC107728827,LOC107579123 coding upstream 37585 35498326 ~ 35504763 (+)
styxl1 NA coding upstream 47053 35488602 ~ 35495295 (+)
LOC111195094 NA coding upstream 178596 35359733 ~ 35363752 (+)
exosc8 exosc8,LOC107577834,LOC107697412 coding upstream 265721 35270958 ~ 35276627 (+)
LOC103043521 adgrg2 coding downstream 13712 35557928 ~ 35596246 (+)
LOC103023820 NA coding downstream 63556 35607772 ~ 35618274 (+)
LOC111194993 NA coding downstream 77883 35622099 ~ 35629462 (+)
LOC103024448 LOC108413536 coding downstream 192749 35736965 ~ 35789237 (+)
LOC103047081 LOC103047081,LOC108411574,LOC107589340,LOC100004523,LOC107697431,LOC107686183,LOC107578020 coding downstream 431261 35975477 ~ 36166303 (+)
G181415 NA non-coding upstream 53880 35484101 ~ 35488468 (+)
G181413 NA non-coding upstream 59726 35482286 ~ 35482622 (+)
G181408 NA non-coding upstream 70416 35470705 ~ 35471932 (+)
G181390 NA non-coding upstream 131984 35408580 ~ 35410364 (+)
G181372 NA non-coding upstream 217184 35324910 ~ 35325164 (+)
G181439 NA non-coding downstream 85955 35630171 ~ 35631951 (+)
G181556 NA non-coding downstream 242885 35787101 ~ 35792691 (+)
G181586 NA non-coding downstream 316985 35861201 ~ 35901409 (+)
G181605 NA non-coding downstream 377529 35921745 ~ 35922340 (+)
G181614 NA non-coding downstream 441849 35986065 ~ 35989603 (+)
nsun5 nsun5,LOC102793237,LOC107686168 other upstream 138724 35392521 ~ 35403624 (+)
LOC103024954 LOC108423745 other upstream 1035024 34334576 ~ 34507324 (+)
LOC103026201 LOC108277347,LOC108423746,LOC106604019 other upstream 1213378 34172924 ~ 34328970 (+)
ufm1 ufm1,LOC107701138 other upstream 2474416 33050242 ~ 33067932 (+)
G180460 cct8,LOC100304907,LOC107693911,LOC107701129 other upstream 3268550 32264998 ~ 32273798 (+)
LOC107197592 NA other downstream 56267 35600483 ~ 35607593 (+)
LOC103044041 NA other downstream 140788 35685004 ~ 35702995 (+)
LOC103024766 zdhhc20a,LOC107589301,LOC107743391,LOC107686182,LOC107728865,LOC107697429,LOC108411113,LOC108276908 other downstream 271819 35816035 ~ 35842871 (+)
G181734 NA other downstream 662351 36206567 ~ 36209854 (+)

Expression


Co-expression Network