G181460


Basic Information

Item Value
gene id G181460
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 35226519 ~ 35227227 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU245736
TAATACATGTTTAGTTAAACCAAaggtacatttaaaatagatacaaATTCAACTACTccaggctatgttcacatttcAAGTCTATTAAATcaattcttaactttttttcagGTAGATTTTGGAGAATGTTTGTATATTCATAAATGCACTTGCACTTGCAAcgaccagactgagaaacagcttcattccggaagctgtaagactcttaaactccacctaacaacacactgcactgacacacaaggacaaaatactgtttacaaacactgtcactttacccgcactgagacactttatcttctactgctctaattcacattatcatgctgctatagcaaaacttgcactctggacttcatgttgctgcaacctgtctactctcttatcttatctattttgtatatctattttttactgtattcttttattttatctatatatctattttaataacagctcttgggtgtaaactggatcgtgagatcacaatttcattccacctcatgtaccacatgtgatgcgaatgacaataaaatctccttgaatccttgaatccttgaatccttgtaATGCTACATTCTCACAGAAGGTATAGATTTACATCAAACATTATCCTGTTAAACAGTTCATGCTTATGAACTGAAGCACATGCACAAAAGAGCAATGCTTCACTTGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245736 True 678 lncRNA 0.35 2 35226519 35227227

Neighbor

gene id symbol gene type direction distance location
ccna1 ccna1 coding downstream 15754 35205157 ~ 35210765 (-)
spart NA coding downstream 22409 35181398 ~ 35204110 (-)
LOC111195093 NA coding downstream 45778 35169786 ~ 35180741 (-)
LOC103021309 dclk1,LOC107728871,LOC107577778 coding downstream 62147 35075014 ~ 35164372 (-)
rfc3 rfc3,LOC107589808,LOC107728889 coding downstream 686442 34533174 ~ 34540077 (-)
smad9 smad9,LOC107728873 coding upstream 12221 35239448 ~ 35251025 (-)
alg5 alg5,LOC102793295 coding upstream 27547 35254774 ~ 35269308 (-)
supt20h supt20h coding upstream 49313 35276540 ~ 35303385 (-)
c20h21orf91 cunh21orf91 coding upstream 81772 35308999 ~ 35349619 (-)
ripk4 ripk4,LOC107577855 coding upstream 139058 35366285 ~ 35394225 (-)
G181305 NA non-coding downstream 57366 35168172 ~ 35169153 (-)
G181315 NA non-coding downstream 67693 35156578 ~ 35158826 (-)
G181307 NA non-coding downstream 156210 35068121 ~ 35070309 (-)
G181287 NA non-coding downstream 194055 35027736 ~ 35032464 (-)
G181283 NA non-coding downstream 205925 35018049 ~ 35020594 (-)
G181441 rfxap,sertm1 non-coding upstream 5106 35232333 ~ 35234658 (-)
G181465 NA non-coding upstream 56187 35283414 ~ 35316181 (-)
G181466 NA non-coding upstream 63367 35290594 ~ 35351206 (-)
G181479 NA non-coding upstream 171951 35399178 ~ 35402926 (-)
G181480 NA non-coding upstream 183192 35410419 ~ 35450392 (-)
LOC103033173 NA other downstream 1370887 33805240 ~ 33855632 (-)
tiam1 tiam1,LOC108423828,LOC107718732 other downstream 2642176 32436325 ~ 32584343 (-)
tmem135 tmem135,LOC107701128,LOC107718730 other downstream 2963921 32240179 ~ 32262598 (-)
LOC103030555 LOC108423819,LOC107701125,LOC107718772,LOC107720543,LOC107556862,LOC107693906 other downstream 3154595 31894202 ~ 32071924 (-)
G180188 dyrk1a,LOC108411986,LOC107572954 other downstream 4268752 30946946 ~ 30957767 (-)
LOC103042595 LOC106931471,LOC106940241,LOC106603438,LOC107659943,LOC101067200 other upstream 206005 35433232 ~ 35470789 (-)

Expression


Co-expression Network