G181465



Basic Information


Item Value
gene id G181465
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 35283414 ~ 35316181 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>TU245747
agtctaaaagttgccgtaattaaggagtttaatattaagagacatcatgaaattaaacatcaatttgaaaaatcttagtttacacaacactgtcaaagataaagatagtaaatcaagtaaaatggtgtgtaaatgaaattaatcaggaaaatgtattatttaaagtggtatatttcattatttgttttattacagagtctgtggcccgtgacttcaaatatatttctccttctgacccccaacaaaaaaagtttggacacccctgatgtagGGTTTTTGGAGACATATGTATGAAACAAGTATCAACTGctgagtaggggtgtgccatactgtatcgtacacga

Function


GO:

id name namespace
GO:0030545 receptor regulator activity molecular_function
GO:0048018 receptor ligand activity molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU245747 True 344 lncRNA 0.33 2 35283414 35316181

Neighbor


gene id symbol gene type direction distance location
alg5 alg5,LOC102793295 coding downstream 14106 35254774 ~ 35269308 (-)
smad9 smad9,LOC107728873 coding downstream 32389 35239448 ~ 35251025 (-)
ccna1 ccna1 coding downstream 72649 35205157 ~ 35210765 (-)
spart NA coding downstream 79304 35181398 ~ 35204110 (-)
LOC111195093 NA coding downstream 102673 35169786 ~ 35180741 (-)
ripk4 ripk4,LOC107577855 coding upstream 50104 35366285 ~ 35394225 (-)
pom121c pom121c coding upstream 88573 35404754 ~ 35418511 (-)
smg8 smg8,LOC107686170,LOC107589184,LOC107577889 coding upstream 155905 35472086 ~ 35477772 (-)
prr11 NA coding upstream 164114 35480295 ~ 35488505 (-)
rhbdd2 NA coding upstream 226138 35542319 ~ 35552188 (-)
G181441 rfxap,sertm1 non-coding downstream 48756 35232333 ~ 35234658 (-)
G181460 NA non-coding downstream 56187 35226519 ~ 35227227 (-)
G181305 NA non-coding downstream 114261 35168172 ~ 35169153 (-)
G181315 NA non-coding downstream 124588 35156578 ~ 35158826 (-)
G181307 NA non-coding downstream 213105 35068121 ~ 35070309 (-)
G181479 NA non-coding upstream 82997 35399178 ~ 35402926 (-)
G181480 NA non-coding upstream 94238 35410419 ~ 35450392 (-)
G181489 NA non-coding upstream 148083 35464264 ~ 35533212 (-)
G181491 NA non-coding upstream 149827 35466008 ~ 35467627 (-)
G181510 pora,LOC108442441,LOC107577900,LOC107589225 non-coding upstream 219555 35535736 ~ 35536768 (-)
LOC103033173 NA other downstream 1427782 33805240 ~ 33855632 (-)
tiam1 tiam1,LOC108423828,LOC107718732 other downstream 2699071 32436325 ~ 32584343 (-)
tmem135 tmem135,LOC107701128,LOC107718730 other downstream 3020816 32240179 ~ 32262598 (-)
LOC103030555 LOC108423819,LOC107701125,LOC107718772,LOC107720543,LOC107556862,LOC107693906 other downstream 3211490 31894202 ~ 32071924 (-)
G180188 dyrk1a,LOC108411986,LOC107572954 other downstream 4325647 30946946 ~ 30957767 (-)
LOC103042595 LOC106931471,LOC106940241,LOC106603438,LOC107659943,LOC101067200 other upstream 117051 35433232 ~ 35470789 (-)

Expression



Co-expression Network