G181479


Basic Information

Item Value
gene id G181479
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 35399178 ~ 35402926 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU245765
TGAGATCTTTACCTGAAACCAGGGTTTTTCTGAAGGCATGCAGACACGACCTCCTCGTTCTCTGTGGAGTGTATAGAGCAGGTAGAGTAGACAACACGCTGGAGCTGAGGAAACTGCAGAGCATGGTCTAGACAGCGCAGCTGAAATGCAGCCAACGCCTGAAGACGTTCACTATCCTGCTCCTCTGAGCTTCCATCAGGCAGACACACCATTCCTTTGGGGATCATGgatgtattagtactaggggtgtgccatatcgcatCATaagcgataatatcgccaacatttttgaatatcgtgaacgatattataccttaaaaatattgtgccatatcacccacccctaattatcacagggtactacttttttactgttttttttttttgcgcaaaGGAAAAAATtatactgttctcatttcccattatatatctactagagactagagattatatctgtccagtatcatttattttactttaatcctggatacatggagatatatggagtgcattatta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245765 True 517 lncRNA 0.41 2 35399178 35402926

Neighbor

gene id symbol gene type direction distance location
ripk4 ripk4,LOC107577855 coding downstream 4953 35366285 ~ 35394225 (-)
c20h21orf91 cunh21orf91 coding downstream 49559 35308999 ~ 35349619 (-)
supt20h supt20h coding downstream 95793 35276540 ~ 35303385 (-)
alg5 alg5,LOC102793295 coding downstream 129870 35254774 ~ 35269308 (-)
smad9 smad9,LOC107728873 coding downstream 148153 35239448 ~ 35251025 (-)
pom121c pom121c coding upstream 1828 35404754 ~ 35418511 (-)
smg8 smg8,LOC107686170,LOC107589184,LOC107577889 coding upstream 69160 35472086 ~ 35477772 (-)
prr11 NA coding upstream 77369 35480295 ~ 35488505 (-)
rhbdd2 NA coding upstream 139393 35542319 ~ 35552188 (-)
LOC103044945 gabrr3,gabrr3a,LOC107589257,LOC107697425,LOC107686176,LOC106603079,LOC106563567 coding upstream 235079 35638005 ~ 35674164 (-)
G181466 NA non-coding downstream 47972 35290594 ~ 35351206 (-)
G181465 NA non-coding downstream 82997 35283414 ~ 35316181 (-)
G181441 rfxap,sertm1 non-coding downstream 164520 35232333 ~ 35234658 (-)
G181460 NA non-coding downstream 171951 35226519 ~ 35227227 (-)
G181305 NA non-coding downstream 230025 35168172 ~ 35169153 (-)
G181480 NA non-coding upstream 7493 35410419 ~ 35450392 (-)
G181489 NA non-coding upstream 61338 35464264 ~ 35533212 (-)
G181491 NA non-coding upstream 63082 35466008 ~ 35467627 (-)
G181510 pora,LOC108442441,LOC107577900,LOC107589225 non-coding upstream 132810 35535736 ~ 35536768 (-)
G181519 NA non-coding upstream 171004 35573930 ~ 35574384 (-)
LOC103033173 NA other downstream 1543546 33805240 ~ 33855632 (-)
tiam1 tiam1,LOC108423828,LOC107718732 other downstream 2814835 32436325 ~ 32584343 (-)
tmem135 tmem135,LOC107701128,LOC107718730 other downstream 3136580 32240179 ~ 32262598 (-)
LOC103030555 LOC108423819,LOC107701125,LOC107718772,LOC107720543,LOC107556862,LOC107693906 other downstream 3327254 31894202 ~ 32071924 (-)
G180188 dyrk1a,LOC108411986,LOC107572954 other downstream 4441411 30946946 ~ 30957767 (-)
LOC103042595 LOC106931471,LOC106940241,LOC106603438,LOC107659943,LOC101067200 other upstream 30306 35433232 ~ 35470789 (-)

Expression


Co-expression Network