G181489


Basic Information

Item Value
gene id G181489
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 35464264 ~ 35533212 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU245776
cagccaattacccaacccactcattaggactcctccccctatcactagtgatgccccaacacaccaggagggtgaagactaacacatgcttcctctgatacatgtgaagtcagccactgcttcttttcgagctgctgctgatgcagcgcAGCAGcttggttccaatacatcagctcacagatgccctgtgctgtggacatcaacGTAGGAGTGATTTGGgtagagagcgccatctacccacccggagggagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245776 True 252 lncRNA 0.54 2 35464264 35533212

Neighbor

gene id symbol gene type direction distance location
pom121c pom121c coding downstream 45753 35404754 ~ 35418511 (-)
ripk4 ripk4,LOC107577855 coding downstream 70039 35366285 ~ 35394225 (-)
c20h21orf91 cunh21orf91 coding downstream 114645 35308999 ~ 35349619 (-)
supt20h supt20h coding downstream 160879 35276540 ~ 35303385 (-)
alg5 alg5,LOC102793295 coding downstream 194956 35254774 ~ 35269308 (-)
rhbdd2 NA coding upstream 9107 35542319 ~ 35552188 (-)
LOC103044945 gabrr3,gabrr3a,LOC107589257,LOC107697425,LOC107686176,LOC106603079,LOC106563567 coding upstream 104793 35638005 ~ 35674164 (-)
LOC103045257 LOC108411116 coding upstream 273520 35806732 ~ 35810671 (-)
smg6 NA coding upstream 313178 35846390 ~ 35873586 (-)
ovca2 ovca2 coding upstream 372472 35905684 ~ 35942719 (-)
G181480 NA non-coding downstream 13872 35410419 ~ 35450392 (-)
G181479 NA non-coding downstream 61338 35399178 ~ 35402926 (-)
G181466 NA non-coding downstream 113058 35290594 ~ 35351206 (-)
G181465 NA non-coding downstream 148083 35283414 ~ 35316181 (-)
G181441 rfxap,sertm1 non-coding downstream 229606 35232333 ~ 35234658 (-)
G181510 pora,LOC108442441,LOC107577900,LOC107589225 non-coding upstream 2524 35535736 ~ 35536768 (-)
G181519 NA non-coding upstream 40718 35573930 ~ 35574384 (-)
G181529 NA non-coding upstream 65312 35598524 ~ 35598765 (-)
G181533 NA non-coding upstream 73680 35606892 ~ 35607986 (-)
G181540 NA non-coding upstream 84670 35617882 ~ 35625755 (-)
LOC103033173 NA other downstream 1608632 33805240 ~ 33855632 (-)
tiam1 tiam1,LOC108423828,LOC107718732 other downstream 2879921 32436325 ~ 32584343 (-)
tmem135 tmem135,LOC107701128,LOC107718730 other downstream 3201666 32240179 ~ 32262598 (-)
LOC103030555 LOC108423819,LOC107701125,LOC107718772,LOC107720543,LOC107556862,LOC107693906 other downstream 3392340 31894202 ~ 32071924 (-)
G180188 dyrk1a,LOC108411986,LOC107572954 other downstream 4506497 30946946 ~ 30957767 (-)

Expression


Co-expression Network