G181510 (pora,LOC108442441,LOC107577900,LOC107589225)


Basic Information

Item Value
gene id G181510
gene name pora,LOC108442441,LOC107577900,LOC107589225
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 35535736 ~ 35536768 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU245799
ACCTTGTTGTTTCTGCCATGCTCTCTCCTGGAGGAAGCCCATGAAGGGAGCGATTCCGGTGCCTGGCCCAATCATAATTACAGGATTGCTGGCTTTGAACGGGAGGCGGAACTGCGACTTTCTGACGTAGATGGGCACAGTGGGCCAGGGACCACCCTCagtcttcactttgtttttgaGCCAGTTGGTGGCTACTCCCTTGAAGACTCGCCCTGTCTTGGTAGTGTAGTCTAGCACCACAGCACAGATGTGTATAGAGGTGGGGTGGACCTTAGCAGATGATGCTATGGAGTAGTAGCGTGCCTGCAGACGAGGTAGAAGCTCACACAGGTAATCTACAGGAGGGTTCAGAGACGGCAGGTCCTCTAAAACAGCCAGGATGTTCCTCTCAGACTCCACCACCCAACTGTGGTACAGAGC

Function

symbol description
pora Predicted to enable FMN binding activity; NADPH-hemoprotein reductase activity; and flavin adenine dinucleotide binding activity. Predicted to be involved in response to hormone. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in congenital adrenal hyperplasia and cytochrome P450 oxidoreductase deficiency. Orthologous to human POR (cytochrome p450 oxidoreductase).

NR:

description
PREDICTED: NADPH--cytochrome P450 reductase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245799 True 420 lncRNA 0.54 2 35535736 35536768

Neighbor

gene id symbol gene type direction distance location
prr11 NA coding downstream 47231 35480295 ~ 35488505 (-)
smg8 smg8,LOC107686170,LOC107589184,LOC107577889 coding downstream 57964 35472086 ~ 35477772 (-)
pom121c pom121c coding downstream 117225 35404754 ~ 35418511 (-)
ripk4 ripk4,LOC107577855 coding downstream 141511 35366285 ~ 35394225 (-)
c20h21orf91 cunh21orf91 coding downstream 186117 35308999 ~ 35349619 (-)
rhbdd2 NA coding upstream 5551 35542319 ~ 35552188 (-)
LOC103044945 gabrr3,gabrr3a,LOC107589257,LOC107697425,LOC107686176,LOC106603079,LOC106563567 coding upstream 101237 35638005 ~ 35674164 (-)
LOC103045257 LOC108411116 coding upstream 269964 35806732 ~ 35810671 (-)
smg6 NA coding upstream 309622 35846390 ~ 35873586 (-)
ovca2 ovca2 coding upstream 368916 35905684 ~ 35942719 (-)
G181489 NA non-coding downstream 2524 35464264 ~ 35533212 (-)
G181491 NA non-coding downstream 68109 35466008 ~ 35467627 (-)
G181480 NA non-coding downstream 85344 35410419 ~ 35450392 (-)
G181479 NA non-coding downstream 132810 35399178 ~ 35402926 (-)
G181466 NA non-coding downstream 184530 35290594 ~ 35351206 (-)
G181519 NA non-coding upstream 37162 35573930 ~ 35574384 (-)
G181529 NA non-coding upstream 61756 35598524 ~ 35598765 (-)
G181533 NA non-coding upstream 70124 35606892 ~ 35607986 (-)
G181540 NA non-coding upstream 81114 35617882 ~ 35625755 (-)
G181541 NA non-coding upstream 85892 35622660 ~ 35624687 (-)
LOC103042595 LOC106931471,LOC106940241,LOC106603438,LOC107659943,LOC101067200 other downstream 64947 35433232 ~ 35470789 (-)
LOC103033173 NA other downstream 1680104 33805240 ~ 33855632 (-)
tiam1 tiam1,LOC108423828,LOC107718732 other downstream 2951393 32436325 ~ 32584343 (-)
tmem135 tmem135,LOC107701128,LOC107718730 other downstream 3273138 32240179 ~ 32262598 (-)
LOC103030555 LOC108423819,LOC107701125,LOC107718772,LOC107720543,LOC107556862,LOC107693906 other downstream 3463812 31894202 ~ 32071924 (-)

Expression


Co-expression Network