LOC103047081 (LOC103047081,LOC108411574,LOC107589340,LOC100004523,LOC107697431,LOC107686183,LOC107578020)


Basic Information

Item Value
gene id LOC103047081
gene name LOC103047081,LOC108411574,LOC107589340,LOC100004523,LOC107697431,LOC107686183,LOC107578020
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 35975477 ~ 36166303 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007229775.3
GGAGACTGGAGCGCGCGACGGAGAGAGACTCCTCGCGCCAGGTAGCCTAGCCTAGCTCCTCGCGCCGGAGGAGGGCTGCTGGTCCTGATAACTTACACACAGCTTTACTGTGACTGTGAGGAGCGCGTGCGTGTGTTTTGGGGCGTTTTCTGATATTAGACCTGTATAATGTAGAAGAGCGGAGTGTAGAAGCTGTGAGCAGAGAGTCTGTAGTTCTGTGGGGGTTTGAGGGAGGGAGCGGTGTAACGGGCGGACTGTGTTTCTGGATTCTTGTTTTTATCTCGGAGTCTTTACTGATTTAACTCTCCTCTCTGAACGCGGGATTCGGGAGCCGCTGCTGCCGCTGTTTTACGGGATGCGGGCGGCAGTAGTCTCCACCTGAGTCGGGTCAGTTCCTCCAGTGTTTATCTGGACCTCCACCCAGTTCCACACACTCTGAGGGCGAGGAGAAGCAGATAACTTCGTCTTCTTCATCCTTCACCTTatcctcatcctcctcttcctcctcgcgGAGTATCGCAGAACCAGCGGACCAACATGAGGGGAAAATTCTGACGGGAATATCAGACTTTCACTCCATCTCCAGAATGTTCAGACGAGGCTGTGGTCTGGAGTTCCTTCTGGTGCTGTGTGGGTTGGAGCTGTCGCAGTCGTGCCCGCGCCACTGCATCTGCTACAGCTCGCCTAGCACGGTCAGCTGCCAGGCGCACAACTTCCAGGTGGTTCCCGAGGGCATCCCGGCGCAGAGCGAACGCGTCTTCTTGCAGAACAACAAGATCCAGCGCCTGCTCCAGGGCCACTTCAGCCCCACCACTGTCATGCTGTGGCTCTACTCCAACAACATCTCTTATATCCAGCCCTCCACCTTCATGGGCTTCACCCGCTTGGAGGAGCTCGACCTGGGTGACAACCGCCACCTGGGCTCGCTGGCTAGCGACACCTTCCAGGGCCTGGGTCGCCTCCACGCGCTCCACCTCTACCACTGCGGCCTGCTGACCCTGCCTGCCGGCCTGTTTGATGGCCTGCACAACCTGCAGTACCTTTATCTGCAGGACAACCAGCTGGAATTCCTGGAGGACGATATGTTCGTGGACCTCCTGAACCTCAGCCACCTCTTCCTGCATGGCAACCGGCTGTGGAGCCTCCATCAGAACACGTTCCGTGGCCTCGGTGCCCTGGACCGCCTGCTGCTGCATCAGAATCGGCTCCAGTGGATCCATCAGCTGGCCTTCCATGACTTGAGGCGCCTGACCACGCTGTACCTGTTCAACAACTCTCTGCCGGAGCTAGCCGCAGAGAGCCTGGCAATGCTTCCGGCCCTGGAGTACCTGCGACTTAACGACAACCCATGGGAATGTGACTGTAAAGCTGTGGCGCTCTGGGACTGGCTGCGCCGCTTCCGTGGCTCCACCTCTTCAGTGGTGTGCGTGGCTCCGCCCGAGCTTGCAGGGAAAGACCTGAAGCGGGTGAAGAAGGAGGAGTTACCTGCTTGCACTGGTTCTGAGTCCCTGCACCAGAGCAAGTCCAGCCAGGGGGACGTTGGCGTGTCGCTGAAGAAGGACCATCACCATCGACTGCAttcccaccaccaccatcctCACCTGCCTCACCAGGACCAACATTTCCCCCCCTCATCAGCCCCCCTGCCTGCACCTCCAAAGGCAGGACGCAACAGGAACTGCACGAGGCAGCGTGGTCGGAAGGGGAAAGGGCAGAATGAGGTGTATGGCCATAAAGACTTGGGGGAGGGAAAAGAGGGAGAGGGCAAATACGACCCCTTAAATCCTGAAGGTTCCCCACCAAGACGTAAAAATAAGTGCATCCCAAGGACCTCGGTAGGGCCCCCAAGTGGGGTTCAGAGAGCCACCAACAGAGCCATGTCACTGGTGCATTCTCTCCTCATTCCTCTCTGCCTATTGGCTCCTCTTACAACCTTTATACAGCGCTGAGCCAATGCAGCCCTTGCTTTGTGGTAACAGTCAAATATAATAACTAACTCCGTCCTCAATCTACTCTGGCTCCTACACTaaagtgtgtgagggtgtgtgtgtgtgtgtgtgtatgcgtgtcttATCAAGCGTGCAGTTACccaatgtgtgtttatgtggtaaGCCTCTCTTGTGTCAGAAGGCGGATTGAACTCTAAACCGTGAGCCTGAAATTTAACATGAggtttaaaagaagaaaaaaggcacCCTGGATCTCATCTTACGAAGTAGTGGAGTTCACAAATCTGACTCTGGCTTCCTCAAGAACCAGTTTAAGACTCTGTCTGTGTCTTCTCTAATCTTTTGTACTAACAAGATTCAGATCCAAGGTCATATCATATTCGCCATATATTCTGTAACGAGCGTCAGAGGATGGGGAGCTTCTATACGTTTTGCACACATTCCaacccacacagcactgcaggcTCATTAGTTTCCTGCTGTAATTTAGATGACGGCCATTATGTCCTCCCCATCACAAGCGCCGGGCCCTCGGACCACGGACACGCTGATGCACGCTGCTCTCAGCAGGGCGAGGCGCGTGGGCGAGACACAGCAACCAAATATTAACAGAGCGCTTTCAGGTATGCTTTTGCTGAAGAATTAGCCTGTCAGCATTAAAAGGTGGGTActttactctgtctctctctagcTTTAGACGGAGACGTGGCCATATCCAAGCTACTCTAAGCTCATATGTGGGTGGGTCTGCGCATAATATGTCCTTATGTTTCATCACATTTAAATGGAATAGCtactttcttcttctgtttccaAAGCACACTGAAGTCTGTTGACCTTAAGCTGCTGGGTGGGTTTGGTCGTTGAGGTGGAGAGCTGCTCTGTGCCGgcgactgtctgtctgtctgagagtgtgtctggTTTGCTTAGCTGTGAGATGTGTTTGCTATTAGAACCTAGTGGGAGGATGGTAGTTAAAGAGGTGGCGAGGTCAAATATAGCTCCTGCCATGGCAGTTCACCCAAGTGTGCTATCCATCATTGTGATACATGGGCATTCTCCGTGTCATTGCTCACTGGGAAATCTATCTACAGCACGCCACGGTCAAGCGAATCAACAGAGAGACGAAACACTCCTGCAGTTACAGGGGGAGAACAGCAAACAGACGGACGGACATCGCTTTAAATCCCTTAGCCATAATTCTGACTAACAGAACGTTTCTAAAGCCAGCAAGGAAAAGTGACAGTGCCCCCTTTGTTCTGGAGGACTCGCAGCACTTTCCCcagtccagtctctgttccCTGCACTCAAAGACTACTTATAGAAGTTTCTATTAAAGTGAACTGAGATTGATATGAACTAACTAACATTGTGAGCATTGATTTCTTTGGGAACATCACTTGTCACACTCTGAGGGAACAAAATGAATTTTGTCTTCCTCCTCAAGGCGAGGggtagtttatttttattatgcatTGTTCGTTTTTCTAATCGTTCATTATAATTTCAGACAAAGTGCACTGTGCTGTctaccctctttctctccctctcagcCCGATCTTCAtcccatgctctctctctctctctctctctctctctctctgtctatctctatttctccctctcttgccTTCTCTGTGACTCAAACTTTCTGTCTGTTGTTATCCAACACCACCAGACTCCAGAAGCTGTTTCTAAAGAACATTAAAGAGAAAATGTGATCTTA

Function

NR:

description
reticulon-4 receptor-like 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007229775.3 True 3675 mRNA 0.52 3 35975477 36166303

Neighbor

gene id symbol gene type direction distance location
LOC103024448 LOC108413536 coding upstream 186240 35736965 ~ 35789237 (+)
LOC111194993 NA coding upstream 346015 35622099 ~ 35629462 (+)
LOC103023820 NA coding upstream 357203 35607772 ~ 35618274 (+)
LOC103043521 adgrg2 coding upstream 379231 35557928 ~ 35596246 (+)
LOC103023494 LOC107577900,LOC108442441 coding upstream 433686 35518171 ~ 35541791 (+)
G181605 NA non-coding upstream 53137 35921745 ~ 35922340 (+)
G181586 NA non-coding upstream 74068 35861201 ~ 35901409 (+)
G181556 NA non-coding upstream 182786 35787101 ~ 35792691 (+)
G181439 NA non-coding upstream 343526 35630171 ~ 35631951 (+)
G181424 NA non-coding upstream 431261 35542348 ~ 35544216 (+)
G181642 NA non-coding downstream 36903 36203206 ~ 36204771 (+)
LOC103024766 zdhhc20a,LOC107589301,LOC107743391,LOC107686182,LOC107728865,LOC107697429,LOC108411113,LOC108276908 other upstream 132606 35816035 ~ 35842871 (+)
LOC103044041 NA other upstream 272482 35685004 ~ 35702995 (+)
LOC107197592 NA other upstream 367884 35600483 ~ 35607593 (+)
nsun5 nsun5,LOC102793237,LOC107686168 other upstream 571853 35392521 ~ 35403624 (+)
LOC103024954 LOC108423745 other upstream 1468153 34334576 ~ 34507324 (+)
G181734 NA other downstream 40264 36206567 ~ 36209854 (+)

Expression


Co-expression Network