esam


Basic Information

Item Value
gene id esam
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 29428891 ~ 29503168 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007231119.3
AGCTTAACTGTACAGGGGGGGGTTACAGCAGCCGAGAGAGCTCAGCCTTAACTTTAACTGTAACCGGGAGCTTTCGGGGTCGAAGTGCAGCAGAAACTACGCTCTCTGATATCGCTCTCTGATATCGCTCACTTTGTTCTGGCACTTGGGGAAGTTTCCCTCTCCGTCGGTCGTGTTTTAGGGGCCGTTTCCCGCGCTGAGGGTCTTCTGTGTTCCTGAAGAGGGTCGTGTTGTttgaggagcagcagcagcagataacgGGAGTGTTTGAGGACTCGCTGAGGGAGAAGCGCTGTGTGTCTGAGCGGGGAGAGAGAGTTCATACTGCTGAGGAATGGAGCTCCGGACCCGGGGGAAACTTGGCACCCTGCTGCCAGCTTTCACATTACTGTGCCTGCTCTCAGGTGTCTTTACCGATCTTCAGCTGCCCCAGAAGAACATGGAGGTGATCCAGGGACAGACGGTGGTCCTCCAGGCCACGTATTCAGGAGCGGACATCGCCCAGGGCACTGTCATTTGGAACAATGCAGACAAATCTGAAACGATCATTTCCTATATAAATGGTGATGTAGCTGTTGGTCCAGTCTATAAAGGCAGAGCGGGTTTTGACAATGAAATGCCCAACAACAACCTGGCAATCTACATTAATAACACTGTGGAGTCGGATTCGGGGCGTTATACGTGCCAGGTTATCCTGCCCACAATCCCTGGACCCCCCAAGTCACTGACGCTTGATGTAAAGGTCCCACCTGCCATACCTGAGTGTTCACTGCAGGGGAAGCCAGTTCTCAAAGCTAATGTCACTCTCTACTGCCACTCCAGCTCTGGGAAACCTGTACCCAAATACAAGTGGGTTAAAACCAGCCCAACCACAGAAGTCTTCTTCTCCCCTATGCTCAATGAGACTGGGGGCACTCTGAAGCTCAACAACCTGAGCAGCAACATGTCCGGGAAGTATGAGTGCACCTCCTCCAACTCTGCCGGAGAGGGCAAGTGCTACATCAACCTAGAGGTCATCACCTCAACGAATGCTGGGGTGATTGCTGGTGCCACAGTGGGTGCAGTGGTGGGCTTTGTCCTCATCGTCCTCTTCATCATTTTCTTGTGGACAAGAAGGCGAGACACAGAGGAAGATCTGGCCAACGACATCAAagAAGACGCTCAGGCTCCCAAGCGCGTCTCCTGGGCCAAGAGTGGCACAGGCTCGGACATCGTCTCTAAAAATGGCACTCTGTCATCCATCAACTCCAGCCCTCACCTCCGAGACACCCACAACCATTACCAGCACCACTACTCCCACTCCCACTCCCACCCCACCTCCGACACGGCCTCCATCATCACCGGCAGCACAGCAGGCTTCCGCCCCCGTCCAGTGGCCTCCACTGCCACCCCTGAGCACACTCTGCCCGGCTACAACACCAACCCCACCCTGCCCCTGCAGCATCCGGCACCCCCCAGCTCCAACGGGGGCTCCCTGCCCAGGACTGAAGCAGCCCAGCCGCAGATGCCCCGCCCGCCTCCCCTCCCGACCGGAGTCAGCATCGCCAACATCTCCCGCATGGGGGGCGTGCCCATCATGGTGCCAGCGCAGAACCAAGCTGGCTCTCTGGTGTAGTTCTAGCTCTAGCCAATCTGGTTTAACAGCACTACAGTGCCCCCTGCTGGACCCCAcagtggaaaaaagaaaagatggaaAAAGAGACAGTAACTGAATCGTGTCCAGTTTGACCCAACAGGTGGATTCAACACAGTGGGGAGCTGGCTTTTAACTGCCTCTGCCCAAGAATGTGCAGTATGATGTAACTTTCTTTACTGTAatgatgttttttatgtttttatactatatattaagAATTTATGCATACattcatccaaaaaaaaaaa

Function

GO:

id name namespace
GO:0070527 platelet aggregation biological_process

KEGG:

id description
K06787 ESAM; endothelial cell adhesion molecule

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007231119.3 True 1884 mRNA 0.54 7 29428891 29503168

Neighbor

gene id symbol gene type direction distance location
msantd2 msantd2,LOC107577222,LOC107588693 coding upstream 6984 29415823 ~ 29421907 (+)
robo4 robo4 coding upstream 280081 29108308 ~ 29148810 (+)
tmem218 tmem218 coding upstream 330099 29090621 ~ 29098792 (+)
LOC103040165 LOC108423783,LOC108277314,LOC107746996 coding upstream 1043796 27672949 ~ 28385095 (+)
c20h11orf63 NA coding upstream 1805226 27567728 ~ 27623665 (+)
LOC103034698 v26bl,LOC108423787,LOC107588734,LOC107751386,LOC107691644,LOC105024202 coding downstream 6930 29510098 ~ 29516946 (+)
fez1 fez1,LOC107691643,LOC107751387 coding downstream 25146 29528314 ~ 29557162 (+)
ccdc83 NA coding downstream 59376 29562544 ~ 29573245 (+)
LOC103038052 zpld1,zpld1a,LOC103038052,LOC108276676,LOC107548885,LOC107693966 coding downstream 143524 29646692 ~ 29669237 (+)
LOC103038373 NA coding downstream 180062 29683230 ~ 29691495 (+)
LOC111195084 NA non-coding upstream 123494 29303039 ~ 29305397 (+)
G179872 NA non-coding upstream 127554 29300587 ~ 29301337 (+)
G179820 NA non-coding upstream 495751 28915333 ~ 28933140 (+)
G179819 NA non-coding upstream 516438 28912175 ~ 28912453 (+)
G179776 NA non-coding upstream 624184 28733121 ~ 28804707 (+)
G179901 NA non-coding downstream 2385 29505553 ~ 29505977 (+)
LOC111195086 NA non-coding downstream 125323 29628491 ~ 29640752 (+)
G179985 NA non-coding downstream 251063 29754231 ~ 29754625 (+)
G179989 NA non-coding downstream 292553 29795721 ~ 29796232 (+)
G179992 NA non-coding downstream 319759 29822927 ~ 29823261 (+)
LOC103038954 zgc:101846,LOC106525086,LOC108416226,LOC101161532 other upstream 1903450 27524302 ~ 27525441 (+)
rnasek rnasek,LOC107554319 other upstream 2512547 26913750 ~ 26916344 (+)
LOC103024073 LOC108424537 other upstream 2549808 26830637 ~ 26879083 (+)
smpd1 smpd1,LOC107718723,LOC107720657,LOC107556869 other upstream 4171422 25244161 ~ 25257469 (+)
LOC103032894 LOC108424565 other upstream 4974269 24447792 ~ 24454622 (+)
G180235 erg other downstream 1636176 31139344 ~ 31151095 (+)
G180266 NA other downstream 1930030 31433198 ~ 31433909 (+)
G180460 cct8,LOC100304907,LOC107693911,LOC107701129 other downstream 2761830 32264998 ~ 32273798 (+)
ufm1 ufm1,LOC107701138 other downstream 3547074 33050242 ~ 33067932 (+)
LOC103026201 LOC108277347,LOC108423746,LOC106604019 other downstream 4669756 34172924 ~ 34328970 (+)

Expression


Co-expression Network