fez1 (fez1,LOC107691643,LOC107751387)


Basic Information

Item Value
gene id fez1
gene name fez1,LOC107691643,LOC107751387
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 29528314 ~ 29557162 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007231120.3
TGCGCAGGCTCGGtgaggaggctgctgctgctgcttattGATCAAAAGACAAGCGGCTGCTTCAGGCTGAGGAACAGAGCGAGCCAGTCAGGCAGGGCAGGAAAAGCGAGGGATAtttatagagagaaagaaagatagagaaatagaaagagggagagaaatgaAAGTGTCTGCCATCATATCCTGCTGCATGATGGTGGTGTGGTTCTGACCTGCTTGGACTAAGGAGgggctctctctctatcctgcTACACAACAAGGAAAGACTCTACTGAAGATTGTGATTGAGCTGATCTTCAAGTCGCTGTTCAGTTGGAGGCATCAGTATGGAGGCTCCGCTGGTCTGCCTAGATGAGGAGTTTGAGGATCTCCGGCCGTGTAAGATAGACGAGCTGGATCCAGAACCAGCCCCCCGTCGGCCGTACGGGACGGTGCCTCTGGCCCCTCTGGGCCGGGAAGACTTCTCCGAGCTGGAGAACTTCTCAGAGATGATGAGTTTCAAGTCCATGGAGGATCTGGTGAACGAGTTTGATGAGAAGCTGAACGTGTGCTTCCACAACTACAACACCAAGACGGAGGGCCTCGCTCCAGTTCGCAACCAGTCACACACCGAGGAGGATGAGGAGCGGCTGCAGGATGAAGATGTGTGGGACGCTCTGACTGATAACTACATGCCATCTTCTGTGTCCAGCTGGGACGGCCCCATCTCAGAGACGCTGAATGGCAACCTCTCAGATGATGAGATCCATGAAAAAGACGAGGAGGAGATGAATGAAAAGAACGAAAACGGCAATTGTATTAGTGATGAGCCTCTTATCACAGCTGATCAGGTGATTGAGGAGATCGTGGAGATGATGGAGAATTCTCCAGACCCGGGCgagacagaggaagaggaggaggaagagagcgGGGTGGTCTCCCCTAAAACCAACCCGTCTCTACTGGAGGAGATCCGCCTGCTGTCTCAGGCCTCCAATAACAACTGCTCTTATGAAGGTCTGAGTCTGATGCCGAGTTCGGCCTTAGTGGAGCTGTTGTGTCGCGTGGAGGCGGCTATTCGTGAGTACTCGGAGGAGCTGGTGGCACAGCTGGCCCGGCGGGATGAGCTGGAATTCGAGAAAGAGGTGAAGAACACGTTCATCACGGCGCTGATGGAGGTGCAGAACCGGCAGAAGGAGCAGCGCGAGCTCAGCAAGCGCCGCCGCAAAGACAAGGCCATGAGTCTGCAGGGGTCTACCCGCACGGAAAAGCCCAGCAGCATGCCAGTCAAGAGGTTCAGTATGGAGGGTCTGTCTAACATCTTGCAGACGGGCATAAGACAGACGTTCGGAAACtcagggacagacagacagtaccTAAACACAGTTATCCCATATGAGAAGAAGGGCAATTCTCCAACTGTGGATGAACTTCAGATGCTCACAAAAATCCTGTACGCCATGAAAGAGGACAGTGAAAAAGTCCCAACTCTGCTAACTGACTATATACTAAAAGTTCTGTGTCCTACGTAAACTGCTCTGTATGTTCTCCTGTCTTTGGGACTGTGAGGAAGGCTGGTGGTCttcatccccctctctctctctgtgctccaGTCCCAACTGCATGAGCTCCCGACCCATTATCAACGAGGGACCCTTGACATCTAACCATCCTCCCTTCGCTTAGCTAATCCAGCTCATCTCACTGTCCTTCCTGCGCTTGCACATATCCACAAGGCCAGTACAGCAGCGCCTGGTGCTTTCCaccttttttacagtgtactttacAATGGGCCAAAAGCCATACGGAGCATGTTAATAGGGGAACAGGTAAATACGAAATCCGTCTCAGTCTCTGATCAGGTATTCTCTAttcttctcctgttttttttttagctaagcCCACGTGAGGGCGCTTCCTTTCATTCTCATCCATTCAGGTCAGCAGGTGTACTGAGGGACATCACGTAGAGACATGGTCAAGCCTAGATGAATCGTTTGTGCACTTTTTCAACTAGTCTATCCATCCGTCTTCTCATCCTTCTGCTTTATGCTGTTTTAGTATCGTGGCTTCATTTCAGCAGCTAGCATGCTTTAATGTTCACCATTAATGCCAATTTATGGGGGTATCCATGATGACAACCtgagattttgttttttactttttgtttatgtatgtattattttttgacCATTAACCGTTTGTTTTGATGATATCAtcatcaatatatattttttttaaaccatgtaaTTTCTTACGAGAGTTAGAGTAACTGTCATTTATGATGCCATATTACACTCATatcttttatgtatatatatcttGTTTACTAAGGGGCATGAAGGAAAGCAAAGTATGGCTGGAGTCAAAGTTCAAATAAATGTCGAACCCTGTGGAAAAA
>XM_007231121.3
TGCGCAGGCTCGGtgaggaggctgctgctgctgcttattGATCAAAAGACAAGCGGCTGCTTCAGGCTGAGGAACAGAGCGAGCCAGTCAGGCAGGGCAGGAAAAGCGAGGGATAtttatagagagaaagaaagatagagaaatagaaagagggagagaaatgaAAGTGTCTGCCATCATATCCTGCTGCATGATGGTGGTGTGGTTCTGACCTGCTTGGACTAAGGAGgggctctctctctatcctgcTACACAACAAGGAAAGACTCTACTGAAGATTGTGATTGAGCTGATCTTCAAGTCGCTGTTCAGTTGGAGGCATCAGTATGGAGGCTCCGCTGGTCTGCCTAGATGAGGAGTTTGAGGATCTCCGGCCGTGTAAGATAGACGAGCTGGATCCAGAACCAGCCCCCCGTCGGCCGTACGGGACGGTGCCTCTGGCCCCTCTGGGCCGGGAAGACTTCTCCGAGCTGGAGAACTTCTCAGAGATGATGAGTTTCAAGTCCATGGAGGATCTGGTGAACGAGTTTGATGAGAAGCTGAACGTGTGCTTCCACAACTACAACACCAAGACGGAGGGCCTCGCTCCAGTTCGCAACCAGTCACACACCGAGGAGGATGAGGAGCGGCTGCAGGATGAAGACTGGGACGGCCCCATCTCAGAGACGCTGAATGGCAACCTCTCAGATGATGAGATCCATGAAAAAGACGAGGAGGAGATGAATGAAAAGAACGAAAACGGCAATTGTATTAGTGATGAGCCTCTTATCACAGCTGATCAGGTGATTGAGGAGATCGTGGAGATGATGGAGAATTCTCCAGACCCGGGCgagacagaggaagaggaggaggaagagagcgGGGTGGTCTCCCCTAAAACCAACCCGTCTCTACTGGAGGAGATCCGCCTGCTGTCTCAGGCCTCCAATAACAACTGCTCTTATGAAGGTCTGAGTCTGATGCCGAGTTCGGCCTTAGTGGAGCTGTTGTGTCGCGTGGAGGCGGCTATTCGTGAGTACTCGGAGGAGCTGGTGGCACAGCTGGCCCGGCGGGATGAGCTGGAATTCGAGAAAGAGGTGAAGAACACGTTCATCACGGCGCTGATGGAGGTGCAGAACCGGCAGAAGGAGCAGCGCGAGCTCAGCAAGCGCCGCCGCAAAGACAAGGCCATGAGTCTGCAGGGGTCTACCCGCACGGAAAAGCCCAGCAGCATGCCAGTCAAGAGGTTCAGTATGGAGGGTCTGTCTAACATCTTGCAGACGGGCATAAGACAGACGTTCGGAAACtcagggacagacagacagtaccTAAACACAGTTATCCCATATGAGAAGAAGGGCAATTCTCCAACTGTGGATGAACTTCAGATGCTCACAAAAATCCTGTACGCCATGAAAGAGGACAGTGAAAAAGTCCCAACTCTGCTAACTGACTATATACTAAAAGTTCTGTGTCCTACGTAAACTGCTCTGTATGTTCTCCTGTCTTTGGGACTGTGAGGAAGGCTGGTGGTCttcatccccctctctctctctgtgctccaGTCCCAACTGCATGAGCTCCCGACCCATTATCAACGAGGGACCCTTGACATCTAACCATCCTCCCTTCGCTTAGCTAATCCAGCTCATCTCACTGTCCTTCCTGCGCTTGCACATATCCACAAGGCCAGTACAGCAGCGCCTGGTGCTTTCCaccttttttacagtgtactttacAATGGGCCAAAAGCCATACGGAGCATGTTAATAGGGGAACAGGTAAATACGAAATCCGTCTCAGTCTCTGATCAGGTATTCTCTAttcttctcctgttttttttttagctaagcCCACGTGAGGGCGCTTCCTTTCATTCTCATCCATTCAGGTCAGCAGGTGTACTGAGGGACATCACGTAGAGACATGGTCAAGCCTAGATGAATCGTTTGTGCACTTTTTCAACTAGTCTATCCATCCGTCTTCTCATCCTTCTGCTTTATGCTGTTTTAGTATCGTGGCTTCATTTCAGCAGCTAGCATGCTTTAATGTTCACCATTAATGCCAATTTATGGGGGTATCCATGATGACAACCtgagattttgttttttactttttgtttatgtatgtattattttttgacCATTAACCGTTTGTTTTGATGATATCAtcatcaatatatattttttttaaaccatgtaaTTTCTTACGAGAGTTAGAGTAACTGTCATTTATGATGCCATATTACACTCATatcttttatgtatatatatcttGTTTACTAAGGGGCATGAAGGAAAGCAAAGTATGGCTGGAGTCAAAGTTCAAATAAATGTCGAACCCTGTGGAAAAA

Function

symbol description
fez1 Predicted to be active in axon and cytoplasm. Is expressed in nervous system and neural tube. Orthologous to human FEZ1 (fasciculation and elongation protein zeta 1).

NR:

description
fasciculation and elongation protein zeta-1 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007231120.3 True 2380 mRNA 0.49 10 29528314 29557162
XM_007231121.3 False 2332 mRNA 0.48 10 29528314 29557162

Neighbor

gene id symbol gene type direction distance location
LOC103034698 v26bl,LOC108423787,LOC107588734,LOC107751386,LOC107691644,LOC105024202 coding upstream 11368 29510098 ~ 29516946 (+)
esam NA coding upstream 25146 29428891 ~ 29503168 (+)
msantd2 msantd2,LOC107577222,LOC107588693 coding upstream 106407 29415823 ~ 29421907 (+)
robo4 robo4 coding upstream 379504 29108308 ~ 29148810 (+)
tmem218 tmem218 coding upstream 429522 29090621 ~ 29098792 (+)
ccdc83 NA coding downstream 5382 29562544 ~ 29573245 (+)
LOC103038052 zpld1,zpld1a,LOC103038052,LOC108276676,LOC107548885,LOC107693966 coding downstream 89530 29646692 ~ 29669237 (+)
LOC103038373 NA coding downstream 126068 29683230 ~ 29691495 (+)
LOC103038990 NA coding downstream 144200 29701362 ~ 29717879 (+)
alcam NA coding downstream 576032 30133194 ~ 30268718 (+)
G179901 NA non-coding upstream 22337 29505553 ~ 29505977 (+)
LOC111195084 NA non-coding upstream 222917 29303039 ~ 29305397 (+)
G179872 NA non-coding upstream 226977 29300587 ~ 29301337 (+)
G179820 NA non-coding upstream 595174 28915333 ~ 28933140 (+)
G179819 NA non-coding upstream 615861 28912175 ~ 28912453 (+)
LOC111195086 NA non-coding downstream 71329 29628491 ~ 29640752 (+)
G179985 NA non-coding downstream 197069 29754231 ~ 29754625 (+)
G179989 NA non-coding downstream 238559 29795721 ~ 29796232 (+)
G179992 NA non-coding downstream 265765 29822927 ~ 29823261 (+)
G180022 NA non-coding downstream 570068 30127230 ~ 30127650 (+)
LOC103038954 zgc:101846,LOC106525086,LOC108416226,LOC101161532 other upstream 2002873 27524302 ~ 27525441 (+)
rnasek rnasek,LOC107554319 other upstream 2611970 26913750 ~ 26916344 (+)
LOC103024073 LOC108424537 other upstream 2649231 26830637 ~ 26879083 (+)
smpd1 smpd1,LOC107718723,LOC107720657,LOC107556869 other upstream 4270845 25244161 ~ 25257469 (+)
LOC103032894 LOC108424565 other upstream 5073692 24447792 ~ 24454622 (+)
G180235 erg other downstream 1582182 31139344 ~ 31151095 (+)
G180266 NA other downstream 1876036 31433198 ~ 31433909 (+)
G180460 cct8,LOC100304907,LOC107693911,LOC107701129 other downstream 2707836 32264998 ~ 32273798 (+)
ufm1 ufm1,LOC107701138 other downstream 3493080 33050242 ~ 33067932 (+)
LOC103026201 LOC108277347,LOC108423746,LOC106604019 other downstream 4615762 34172924 ~ 34328970 (+)

Expression


Co-expression Network