btg3 (btg3,LOC102786047)


Basic Information

Item Value
gene id btg3
gene name btg3,LOC102786047
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 12758226 ~ 12761626 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007235402.3
AGAGACACAGTAACAGCAGCAAGAAGCAGGAGTGGTTTTAGCTGCTGAAATGCGGCAGCACGGCGGGCCGCGCAGTTAACGCCGTTGTGCGCAGTGTTGTCCAGGGTTGTAGCTaattagttagcttagcttcatAGTCCGCTGCTAGCCAGTTTATAGCCTGTATTTCGTGTTGTGCTCATTAGATAAGTAACGGCTGGTTATTAATTACAGAACTGTTAGTTAGTTTCTGTGTAAAGGCTCGGTTTCGCTTACTGCTGTTGTGTAGATATATTACCCTAGTGTTCTCTGATTGGCCGCTCTGGTTAGTGTTGAATATGTAGCGTAGACTAGTTTCACTGAACTGAGTTAATGAAGTTTTTCTCTCAGAATAAAGGTATTGTTAAGTAACAGGACTGCGAGCTGCTGTGTAATGTGAGCACCGTTAGCTTCTGGCTAATTGCCCGGGTTTAGTGGGGCTGATGAAGCTGAGCGCGCCATTATCTGAACTCTCCCGCCGAtctgccgccgctgctgctgcctccTCGGTTTAAGGGCGGTCAGCTCGGTTATCGGCGGATTTGCAGGTTGTTTTGGGGTTAGGATTTCCACCAGTTGATACGTTTCAGACTAGAGACCAGGACGGATGCTTTTGAAATAAGCTTTTTCCCATATTGTAGTCCTCGTGCACTCCTCTTCCTTACATTCCTCTTTTTCAGTGAGAGAAGAGAGCTTTAGTTTGTCCTGACAGGATTTTAGGTGGACTGAAACGGTGTCTGGGCCATTTCCATACACCTGTGAATATGCTTGTTGGTCAGTTCAGATTTAAGTGGGTGTGTCTGTTAgatttgttttgtgttgttgtgGTGCTTAGCGCTGCAAACAACGGAGAACAGTTGGTTTAGAACTGCATGTAGGAAGAATTAACACACATGACTGTCCATTCCTGgtttaaaagttagttttagtttttcctttttaacaGCACACAATCTGGATCAGCATTTGCTGGCTTTCTTCTCTGATTGCTGTTTCACACTTTGTATCACCCCTGTATGAGCACCTCTTACATAGGTCTGATTGACTGCAGAGCGTCTGTCTTTGGTAATATTTGCAATGCATCTGATTTGATCTGTGAGTTTTTTGGGAGCACAAATCCTTTACTGGCTAGAGAAGTGACACCTAAATGGTCAGGATCAACAAAGGAGTCTACAAATCTATAAATGTCAAGTATAGAGTTCTTCAACCCTAGAATTTGGACCGGATTTTCAGCCCTGCTGCTAACAATGAAGAAAGAAATTGCGGCAGTGGTGTTTTTCTTAAAGCGGTTGATCAAGAAGGCTGAGAAGCTGGATGTGGAGAAAGTGGATCTGTTTGTGGAGCGGTTGACTGTGGCTCTGCAGGAAAAGTTCAGAGGTCACTGGTATCCAGACAACCCTAACAAAGGCCAGGCTTTCAGGTGTATTCGCGTAAACCGGTTCCTTAAAGAAGACCCAGAGCTACTGAGAGCCTGTGCTGAAAGCGGTGTGCAGTATAAGGACCTTGGTCTTCCCAAAGAGCTCACATTGTGGGTAGATCCAGGAGAGGTGTGCTGCAGATATGGTGAGAGGAACCTTGCCTTCACTGTTGCCAGTTTTTCAAGtgagggtgatgatgatgacaaaGAGGATGTGACGAAGAAGGTAACCAGTGCTGTAGAGAGAGTGACCTCAGATTATCATTCAGGATCTTCTTCAGATGAGGACAGTGGCTGCAGAGAGTCCTGTTTCACTCCAAGTTTCACTCATAATTGTCCCCCTTACCAGTTCATCTACCCCGGTGCTCCTGTGTGGCATCCTGTATCCAGAAAGAAGCTTGGACCAGGGAAAGGACATGGCCCGCCACGGCCAAACCATTTTTTCCACCCTCCTGGGAGACACAGCCACTCCTTTAAACCAAACAGCTGGGTACCGAATAGCTACCGAAGCAAACATGGTTACTGGGTCAACATGCCCAACATGGTCCACCAACATTAGTTACTAGTGTAGCACTGGTAGTTTATGGTTCTGTGAAGGTGGAGGTTTTTGAATATACCACTAAGATTACTGACcaaatttttaaagtatttttgtaGTTCAGTTGTCACTTTTCAAATTTGTGAccttgtatatttttaaagaaatataacaGTAAGTCTTTTGCACTTTAGAGGGTTTGTAATCAAGTGTTTATAACATAATCTATATGTATTGGATTAGAAGTATTTGGACATTTTTATAGGAATTGTACTGTTTGTTACGTGGGATCAATATTTGATTATACTTTACCCTAGTGTTTGTCAGTTGTGTTTCAATGaccatatgttttatttattcacattaaAGTATCGTTGAGAACAATTAAGTTATAAATTccattaaaacacatattttctAATCAAAA
>XM_007235403.3
CTGTAGAAGGAAAGTGACGTCACCGAGAAGCTGCGCACCACAGGATCTAGAAGTGTGTCGGCGCGGCAGGAGTTAACCCACATGTTGATGGACGGAGAGCGCGAATTTGGACCGGATTTTCAGCCCTGCTGCTAACAATGAAGAAAGAAATTGCGGCAGTGGTGTTTTTCTTAAAGCGGTTGATCAAGAAGGCTGAGAAGCTGGATGTGGAGAAAGTGGATCTGTTTGTGGAGCGGTTGACTGTGGCTCTGCAGGAAAAGTTCAGAGGTCACTGGTATCCAGACAACCCTAACAAAGGCCAGGCTTTCAGGTGTATTCGCGTAAACCGGTTCCTTAAAGAAGACCCAGAGCTACTGAGAGCCTGTGCTGAAAGCGGTGTGCAGTATAAGGACCTTGGTCTTCCCAAAGAGCTCACATTGTGGGTAGATCCAGGAGAGGTGTGCTGCAGATATGGTGAGAGGAACCTTGCCTTCACTGTTGCCAGTTTTTCAAGtgagggtgatgatgatgacaaaGAGGATGTGACGAAGAAGGTAACCAGTGCTGTAGAGAGAGTGACCTCAGATTATCATTCAGGATCTTCTTCAGATGAGGACAGTGGCTGCAGAGAGTCCTGTTTCACTCCAAGTTTCACTCATAATTGTCCCCCTTACCAGTTCATCTACCCCGGTGCTCCTGTGTGGCATCCTGTATCCAGAAAGAAGCTTGGACCAGGGAAAGGACATGGCCCGCCACGGCCAAACCATTTTTTCCACCCTCCTGGGAGACACAGCCACTCCTTTAAACCAAACAGCTGGGTACCGAATAGCTACCGAAGCAAACATGGTTACTGGGTCAACATGCCCAACATGGTCCACCAACATTAGTTACTAGTGTAGCACTGGTAGTTTATGGTTCTGTGAAGGTGGAGGTTTTTGAATATACCACTAAGATTACTGACcaaatttttaaagtatttttgtaGTTCAGTTGTCACTTTTCAAATTTGTGAccttgtatatttttaaagaaatataacaGTAAGTCTTTTGCACTTTAGAGGGTTTGTAATCAAGTGTTTATAACATAATCTATATGTATTGGATTAGAAGTATTTGGACATTTTTATAGGAATTGTACTGTTTGTTACGTGGGATCAATATTTGATTATACTTTACCCTAGTGTTTGTCAGTTGTGTTTCAATGaccatatgttttatttattcacattaaAGTATCGTTGAGAACAATTAAGTTATAAATTccattaaaacacatattttctAATCAAAA

Function

symbol description
btg3 Predicted to be involved in negative regulation of cell population proliferation and negative regulation of mitotic cell cycle. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including immature eye; nervous system; pectoral fin bud; pectoral fin musculature; and segmental plate.

NR:

description
protein BTG3 isoform X1

GO: NA

KEGG:

id description
K14443 TOB; protein Tob/BTG

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007235402.3 True 2400 mRNA 0.43 5 12758226 12761468
XM_007235403.3 False 1272 mRNA 0.43 5 12758226 12761626

Neighbor

gene id symbol gene type direction distance location
LOC103039067 cltc coding downstream 4511 12692865 ~ 12753715 (-)
med13 med13,LOC107744626,LOC107699258,LOC107693951,LOC107747042,LOC107548827 coding downstream 289544 12337212 ~ 12468682 (-)
ints2 ints2,LOC107744627,LOC107699256,LOC107747027 coding downstream 451543 12256861 ~ 12306683 (-)
wdr74 wdr74 coding downstream 619437 12119986 ~ 12138789 (-)
LOC103046645 ehd1b,LOC108414013,LOC107720605,LOC107548869,LOC107718765,LOC107701170,LOC107555151 coding downstream 677595 12008581 ~ 12080631 (-)
alox5ap alox5ap,LOC107697405,LOC107583340,LOC107743481,LOC102776613,LOC107579207,LOC107741175 coding upstream 2562 12764188 ~ 12768958 (-)
uspl1 NA coding upstream 16385 12778011 ~ 12788981 (-)
LOC103040161 NA coding upstream 246191 13007817 ~ 13011654 (-)
LOC103041391 LOC108439213 coding upstream 255900 13017526 ~ 13019489 (-)
LOC107197005 NA coding upstream 505048 13266674 ~ 13267839 (-)
G175606 NA non-coding downstream 55065 12700313 ~ 12703161 (-)
LOC103047042 NA non-coding downstream 112659 12606044 ~ 12645567 (-)
G175578 NA non-coding downstream 144813 12613155 ~ 12613413 (-)
G175553 NA non-coding downstream 152793 12601206 ~ 12605433 (-)
G175555 NA non-coding downstream 157972 12597647 ~ 12600254 (-)
G175610 hmgb1a,LOC100304841,LOC108439208,LOC107653759,LOC107583338,LOC107578084 non-coding upstream 30618 12792244 ~ 12794302 (-)
G175619 katnal1,LOC107578067,LOC107697436,LOC107741157,LOC107653760 non-coding upstream 39280 12800906 ~ 12809051 (-)
G175626 NA non-coding upstream 75162 12836788 ~ 12837379 (-)
LOC111195042 NA non-coding upstream 91707 12853333 ~ 12859954 (-)
G175632 NA non-coding upstream 108446 12870072 ~ 12871807 (-)
G175583 NA other downstream 134671 12623211 ~ 12623555 (-)
G175119 NA other downstream 826472 11827807 ~ 11931754 (-)
G175072 NA other downstream 1114594 11643317 ~ 11643632 (-)
LOC103024982 cldn7,LOC108444573,LOC107552057,LOC107586151,LOC107676017,LOC107678043,LOC107720692 other downstream 1298196 11442311 ~ 11460030 (-)
LOC103030477 NA other downstream 1354525 11397549 ~ 11403701 (-)
G175647 NA other upstream 135414 12897040 ~ 12898630 (-)
G175707 NA other upstream 227311 12988937 ~ 12996934 (-)
LOC111195039 NA other upstream 241761 13003387 ~ 13007061 (-)
LOC103044870 NA other upstream 490531 13252157 ~ 13254568 (-)
LOC111195047 LOC107688027,LOC107751101,LOC107731862,LOC106606817,LOC106579815,LOC107570926,LOC107688028,LOC107689570,LOC107565351 other upstream 643655 13405281 ~ 13407280 (-)

Expression


Co-expression Network