LOC103026990 (ucp3,LOC103026990,LOC108433282,LOC108277383,LOC107578242,LOC105890488,LOC107743402)


Basic Information

Item Value
gene id LOC103026990
gene name ucp3,LOC103026990,LOC108433282,LOC108277383,LOC107578242,LOC105890488,LOC107743402
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 4438040 ~ 4444030 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007244779.3
AGTCGTGTGTCAGTCTGACAGAAGTGTGTAACCTCAGCTAGCGGCACTTTGGAATACTTCCTGGCAAGAACCTGGGCTAACCTTTACCTTCGTTTTCCAGATGGATTaaggaattttggaaCGACAGGCAATTTAGGAGATGCTTTAGAAGTGGAATGCTACATCGGGATTGTATTCCATACGTTTTCATGGCCAAAAACTCTGAACCTGAAAAACGACTGGCACAACAGAGAAGAATCCCAGTTGAAGAAACCTGAGGTATTCACACAAGATAtccccacacactctctctaaaatataataagaCAACTGTCACACTcgcagaagaagcagaaaacATGGTTGGACTCAAGCCCACAGACTTGGCTCCCACAGCCGCAGTGAAGTTCTTTGGCGCGGGAACGGCGGCGTGTATCGCTGACTTGGTGACCTTTCCCCTGGATACAGCCAAAGTGAGGCTTCAGATACAGGGAGAATCCAAGCCAGCTGAAGGAGTAGCAGGGACGAAGTATAGGGGTGTTTTTGGCACCATCAATACCATGGTGCGCACTGAGGGGCCAAGGAGCTTGTACAACGGTCTGGTGGCTGGACTGCAGAGACAAATGAGCTTTGCCTCAGTGCGTATCGGCCTCTACGACTCTATGAAGCAGTTCTACACCAGAGGCTCAGAAGAGGCGAGCATTGTGAGCCGGTTGATGGCAGGCTGCACGACAGGAGCCATGGCCGTAGCGTTTGCACAGCCAACAGATGTTGTGAAGGTGCGCTTCCAAGCCCAAGTACGAGTAGCTGATGGCGCCAAGCGATACAACAGCACAATGGACGCCTACAGGACCATTGCTCGCAATGAAGGCATCAAAGGCCTGTGGAAAGGTTGTTTGCCAAACATCACCCGAAACGCCATTGTGAACTGTGCAGAGCTGGTCACCTACGACATCATCAAGGAGCTGATACTGAAGTACAATCTGATGACAGATAACCTGCCCTGCCACTTCACGGCTGCGTTTGGAGCCGGTTTCTGCACCACCATCGTGGCGTCTCCAGTGGACGTGGTGAAGACACGCTTTATGAACTCCAGTCCCGGCCAGTACAGCAGTGCCATCAACTGTGCCATCACCATGCTGACCAAGGAAGGACCTACAGCCTTTTATAAGGGCTTCATGCCCTCGTTCCTGCGTCTGGGATCCTGGAACATTGTGATGTTTGTCTCCTACGAGCAAATCAAGAGAGCCATGACGCGAGCGCAGCAGTCCTGGGAGTCACCGTTTTGAACTGTCGCATCAGGACAAGAATATGaaagaaaacattaatttaatttatattcctGTGGATCCAGTACTTACCAGCCAGAGAGGACAGTGCTGATGTATGAAAGTCCTCTGTAATGGCGAGAGTTGGAGAAGATGCAGCAGAAGATCTATATTATGGGATTATCTAAGTCTTATCTCTGTGGTGGACTGAGATGAAATAGAGCAGTATGAGAGAACTCATTGTGGATTTACAGCACTTTAAAGACCAAAGGTAGAGCTTACCACTGTTAAACTGTCACAAAGCAAAGGGTGACTGGGAACTGTCGGTGGAGGAAAAATGAGatgtagggctgtgtattggcacaAACTTAGCGATACACTACATATCATGTACATATACAGGGGTAACAAATCaatatttcacattattttGCAATAATGTATCAAGGAGATATATTGCGATTGTTTAAGAAAACctgtcatagtataaaaaactgagtactttttatccaatcacaacagtgggatctaatgaCACTGTACAACACTGCCCTCTAGCTGTCAGGATTTACACAACaaaaaatgaaccactgtctgacagcAATCTtcacatgtaaactaataactaaaaaacaatactgtgcttttaaaaatcaatacagtattgcaaaacaaaatattacaatacttTGATATACTGATATTTTCCTACACCCCTAATGAAACGCCAAACATATCTTTAGATCTTGCACAGGTTTTGGTTTTGTCTTCTCAGAGGAGTGAGTGTATATTTTCGTTAATGTCATATTATGTCACTTTTTTAATACAATGAAGGGTACAGTCATGTTTACACAATTGTTAGGGCTTCACAGCTCTAGTTTACAAAAGCTTGGACCGTATGAAGGTTGGGTCCATAGCAGATGAACTGTTTGTTGCCATTATGAATGCACATGTTTGTTCTACTGTATGTAGGGCAAAAtatttaaagctttattttatacaatgtctatttttgtcaataaaatacaaaaatatatattttta
>XM_022680914.1
AGTCGTGTGTCAGTCTGACAGAAGTGTGTAACCTCAGCTAGCGGCACTTTGGAATACTTCCTGGCAAGAACCTGGGCTAACCTTTACCTTCGTTTTCCAGATGGATTaaggaattttggaattttatCAGAAGTGGAATGCTACATCGGGATTGTATTCCATACGTTTTCATGGCCAAAAACTCTGAACCTGAAAAACGACTGGCACAACAGAGAAGAATCCCAGTTGAAGAAACCTGAGGTATTCACACAAGATAtccccacacactctctctaaaatataataagaCAACTGTCACACTcgcagaagaagcagaaaacATGGTTGGACTCAAGCCCACAGACTTGGCTCCCACAGCCGCAGTGAAGTTCTTTGGCGCGGGAACGGCGGCGTGTATCGCTGACTTGGTGACCTTTCCCCTGGATACAGCCAAAGTGAGGCTTCAGATACAGGGAGAATCCAAGCCAGCTGAAGGAGTAGCAGGGACGAAGTATAGGGGTGTTTTTGGCACCATCAATACCATGGTGCGCACTGAGGGGCCAAGGAGCTTGTACAACGGTCTGGTGGCTGGACTGCAGAGACAAATGAGCTTTGCCTCAGTGCGTATCGGCCTCTACGACTCTATGAAGCAGTTCTACACCAGAGGCTCAGAAGAGGCGAGCATTGTGAGCCGGTTGATGGCAGGCTGCACGACAGGAGCCATGGCCGTAGCGTTTGCACAGCCAACAGATGTTGTGAAGGTGCGCTTCCAAGCCCAAGTACGAGTAGCTGATGGCGCCAAGCGATACAACAGCACAATGGACGCCTACAGGACCATTGCTCGCAATGAAGGCATCAAAGGCCTGTGGAAAGGTTGTTTGCCAAACATCACCCGAAACGCCATTGTGAACTGTGCAGAGCTGGTCACCTACGACATCATCAAGGAGCTGATACTGAAGTACAATCTGATGACAGATAACCTGCCCTGCCACTTCACGGCTGCGTTTGGAGCCGGTTTCTGCACCACCATCGTGGCGTCTCCAGTGGACGTGGTGAAGACACGCTTTATGAACTCCAGTCCCGGCCAGTACAGCAGTGCCATCAACTGTGCCATCACCATGCTGACCAAGGAAGGACCTACAGCCTTTTATAAGGGCTTCATGCCCTCGTTCCTGCGTCTGGGATCCTGGAACATTGTGATGTTTGTCTCCTACGAGCAAATCAAGAGAGCCATGACGCGAGCGCAGCAGTCCTGGGAGTCACCGTTTTGAACTGTCGCATCAGGACAAGAATATGaaagaaaacattaatttaatttatattcctGTGGATCCAGTACTTACCAGCCAGAGAGGACAGTGCTGATGTATGAAAGTCCTCTGTAATGGCGAGAGTTGGAGAAGATGCAGCAGAAGATCTATATTATGGGATTATCTAAGTCTTATCTCTGTGGTGGACTGAGATGAAATAGAGCAGTATGAGAGAACTCATTGTGGATTTACAGCACTTTAAAGACCAAAGGTAGAGCTTACCACTGTTAAACTGTCACAAAGCAAAGGGTGACTGGGAACTGTCGGTGGAGGAAAAATGAGatgtagggctgtgtattggcacaAACTTAGCGATACACTACATATCATGTACATATACAGGGGTAACAAATCaatatttcacattattttGCAATAATGTATCAAGGAGATATATTGCGATTGTTTAAGAAAACctgtcatagtataaaaaactgagtactttttatccaatcacaacagtgggatctaatgaCACTGTACAACACTGCCCTCTAGCTGTCAGGATTTACACAACaaaaaatgaaccactgtctgacagcAATCTtcacatgtaaactaataactaaaaaacaatactgtgcttttaaaaatcaatacagtattgcaaaacaaaatattacaatacttTGATATACTGATATTTTCCTACACCCCTAATGAAACGCCAAACATATCTTTAGATCTTGCACAGGTTTTGGTTTTGTCTTCTCAGAGGAGTGAGTGTATATTTTCGTTAATGTCATATTATGTCACTTTTTTAATACAATGAAGGGTACAGTCATGTTTACACAATTGTTAGGGCTTCACAGCTCTAGTTTACAAAAGCTTGGACCGTATGAAGGTTGGGTCCATAGCAGATGAACTGTTTGTTGCCATTATGAATGCACATGTTTGTTCTACTGTATGTAGGGCAAAAtatttaaagctttattttatacaatgtctatttttgtcaataaaatacaaaaatatatattttta
>XM_022680915.1
AGTCGTGTGTCAGTCTGACAGAAGTGTGTAACCTCAGCTAGCGGCACTTTGGAATACTTCCTGGCAAGAACCTGGGCTAACCTTTACCTTCGTTTTCCAGATGGATTaaggaattttggaattttatCAGAAGTGGAATGCTACATCGGGATTGTATTCCATACGTTTTCATGGCCAAAAACTCTGAACCTGAAAAACGACTGGCACAACAGAGAAGAATCCCAGTTGAAGAAACCTGAGaagaagcagaaaacATGGTTGGACTCAAGCCCACAGACTTGGCTCCCACAGCCGCAGTGAAGTTCTTTGGCGCGGGAACGGCGGCGTGTATCGCTGACTTGGTGACCTTTCCCCTGGATACAGCCAAAGTGAGGCTTCAGATACAGGGAGAATCCAAGCCAGCTGAAGGAGTAGCAGGGACGAAGTATAGGGGTGTTTTTGGCACCATCAATACCATGGTGCGCACTGAGGGGCCAAGGAGCTTGTACAACGGTCTGGTGGCTGGACTGCAGAGACAAATGAGCTTTGCCTCAGTGCGTATCGGCCTCTACGACTCTATGAAGCAGTTCTACACCAGAGGCTCAGAAGAGGCGAGCATTGTGAGCCGGTTGATGGCAGGCTGCACGACAGGAGCCATGGCCGTAGCGTTTGCACAGCCAACAGATGTTGTGAAGGTGCGCTTCCAAGCCCAAGTACGAGTAGCTGATGGCGCCAAGCGATACAACAGCACAATGGACGCCTACAGGACCATTGCTCGCAATGAAGGCATCAAAGGCCTGTGGAAAGGTTGTTTGCCAAACATCACCCGAAACGCCATTGTGAACTGTGCAGAGCTGGTCACCTACGACATCATCAAGGAGCTGATACTGAAGTACAATCTGATGACAGATAACCTGCCCTGCCACTTCACGGCTGCGTTTGGAGCCGGTTTCTGCACCACCATCGTGGCGTCTCCAGTGGACGTGGTGAAGACACGCTTTATGAACTCCAGTCCCGGCCAGTACAGCAGTGCCATCAACTGTGCCATCACCATGCTGACCAAGGAAGGACCTACAGCCTTTTATAAGGGCTTCATGCCCTCGTTCCTGCGTCTGGGATCCTGGAACATTGTGATGTTTGTCTCCTACGAGCAAATCAAGAGAGCCATGACGCGAGCGCAGCAGTCCTGGGAGTCACCGTTTTGAACTGTCGCATCAGGACAAGAATATGaaagaaaacattaatttaatttatattcctGTGGATCCAGTACTTACCAGCCAGAGAGGACAGTGCTGATGTATGAAAGTCCTCTGTAATGGCGAGAGTTGGAGAAGATGCAGCAGAAGATCTATATTATGGGATTATCTAAGTCTTATCTCTGTGGTGGACTGAGATGAAATAGAGCAGTATGAGAGAACTCATTGTGGATTTACAGCACTTTAAAGACCAAAGGTAGAGCTTACCACTGTTAAACTGTCACAAAGCAAAGGGTGACTGGGAACTGTCGGTGGAGGAAAAATGAGatgtagggctgtgtattggcacaAACTTAGCGATACACTACATATCATGTACATATACAGGGGTAACAAATCaatatttcacattattttGCAATAATGTATCAAGGAGATATATTGCGATTGTTTAAGAAAACctgtcatagtataaaaaactgagtactttttatccaatcacaacagtgggatctaatgaCACTGTACAACACTGCCCTCTAGCTGTCAGGATTTACACAACaaaaaatgaaccactgtctgacagcAATCTtcacatgtaaactaataactaaaaaacaatactgtgcttttaaaaatcaatacagtattgcaaaacaaaatattacaatacttTGATATACTGATATTTTCCTACACCCCTAATGAAACGCCAAACATATCTTTAGATCTTGCACAGGTTTTGGTTTTGTCTTCTCAGAGGAGTGAGTGTATATTTTCGTTAATGTCATATTATGTCACTTTTTTAATACAATGAAGGGTACAGTCATGTTTACACAATTGTTAGGGCTTCACAGCTCTAGTTTACAAAAGCTTGGACCGTATGAAGGTTGGGTCCATAGCAGATGAACTGTTTGTTGCCATTATGAATGCACATGTTTGTTCTACTGTATGTAGGGCAAAAtatttaaagctttattttatacaatgtctatttttgtcaataaaatacaaaaatatatattttta

Function

symbol description
ucp3 Predicted to enable oxidative phosphorylation uncoupler activity. Predicted to be involved in adaptive thermogenesis; mitochondrial transmembrane transport; and response to cold. Predicted to act upstream of or within mitochondrial transport. Predicted to be located in mitochondrial membrane. Predicted to be integral component of membrane. Is expressed in several structures, including brain; eye; heart; integument; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in coronary restenosis; diabetic neuropathy; glucose metabolism disease (multiple); and obesity. Orthologous to human UCP3 (uncoupling protein 3).

NR:

description
mitochondrial uncoupling protein 2-like

GO:

id name namespace
GO:0006839 mitochondrial transport biological_process
GO:0031966 mitochondrial membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15103 UCP2_3, SLC25A8_9; solute carrier family 25 (mitochondrial uncoupling protein), member 8/9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007244779.3 True 2291 mRNA 0.44 9 4438040 4444030
XM_022680914.1 False 2273 mRNA 0.44 8 4438040 4444030
XM_022680915.1 False 2207 mRNA 0.44 8 4438040 4444030

Neighbor

gene id symbol gene type direction distance location
LOC103029159 NA coding upstream 49011 4383131 ~ 4389029 (+)
ranbp3l NA coding upstream 58688 4354934 ~ 4379352 (+)
LOC111195096 NA coding upstream 100345 4332873 ~ 4337695 (+)
LOC103042678 NA coding upstream 194011 4242168 ~ 4244029 (+)
LOC103029394 smad4a,LOC108435141,LOC107559658,LOC107668639,LOC107741365,LOC104924734,LOC107373891 coding upstream 1248340 3178378 ~ 3189700 (+)
ucp2 ucp2,ucp2b,LOC106567822 coding downstream 8224 4452254 ~ 4457565 (+)
rab6a rab6a,LOC106603351,LOC107741150 coding downstream 25062 4469092 ~ 4487880 (+)
LOC103024425 fam168a,LOC108433286,LOC108277059,LOC107600264,LOC107594362,LOC105011043 coding downstream 59088 4503118 ~ 4525930 (+)
LOC103024108 LOC108433287,LOC108276817 coding downstream 83541 4527571 ~ 4562681 (+)
ak3 ak3,LOC107658667,LOC107744244,LOC107685112,LOC107713310 coding downstream 567937 5011967 ~ 5026274 (+)
G173272 rsf1b.1,LOC108277234,LOC107697440 non-coding upstream 27261 4408952 ~ 4410779 (+)
G173268 NA non-coding upstream 37460 4393074 ~ 4400580 (+)
G173259 NA non-coding upstream 121568 4313844 ~ 4316472 (+)
G173232 NA non-coding upstream 188077 4248872 ~ 4249963 (+)
G173182 NA non-coding upstream 391696 4046083 ~ 4046344 (+)
G173278 NA non-coding downstream 8839 4452869 ~ 4490753 (+)
G173279 mrpl48 non-coding downstream 19400 4463430 ~ 4466951 (+)
G173288 NA non-coding downstream 62561 4506591 ~ 4507032 (+)
G173292 LOC108433289,LOC108276818 non-coding downstream 124038 4568068 ~ 4571221 (+)
G173380 NA non-coding downstream 248815 4692845 ~ 4693060 (+)
gdnf gdnf,LOC107653769,LOC107752627,LOC107692037,LOC107569368,LOC107727951 other upstream 307558 4118034 ~ 4130482 (+)
G173111 LOC108435134,LOC108277016 other upstream 506049 3908942 ~ 3931991 (+)
G173094 NA other upstream 694835 3740302 ~ 3743205 (+)
unc5c unc5c,LOC108435138,LOC108277026,LOC105911728,LOC106564027,LOC105025160,LOC106568183 other upstream 698304 3465133 ~ 3739736 (+)
LOC103031931 LOC103031931,LOC108435131,LOC104953549 other upstream 1711964 2718609 ~ 2726076 (+)
G173397 NA other downstream 299539 4743569 ~ 4744249 (+)
ptbp3 ptbp3,LOC106592370 other downstream 356599 4800629 ~ 4904202 (+)
nrarp nrarp,nrarpa other downstream 659697 5103727 ~ 5152836 (+)
G173501 NA other downstream 739461 5183491 ~ 5183777 (+)
LOC103041160 NA other downstream 2092297 6536327 ~ 6541379 (+)

Expression


Co-expression Network