LOC103029159


Basic Information

Item Value
gene id LOC103029159
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 4383131 ~ 4389029 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007244787.3
AGTTTGTGAGCGAGTTGAACTTCCGTGCGGGTGAGAATCCTGTCTGTGAGTCTGCGtgttttacagatttacagGTATGATCTGAACCCGAGGATCCCCTGGTTCACTACAGCAGATCAGACCGGATCCGACACCGCGAGTCTCCCAGGCTGATCTCGCTCCGCTCCGGCATGGCAGACACCGCGGTGTCCGTGGCCGCTGTGGCCGGGATCGTGCTGTGCTGCGAGGCGGCGCGGCGGGGCTGTGAGTGGGGGATACGCTGCGCGGATTATCGCCGGTTCTGCTCCGAGCTGATCTCCACGCTGCAGCTCTGCGCCTGCACTCACgagctgaagctgctgggggAGAGCGGCCGCGCGGACCCGCAGATCGGCCTGACCCTCACCTACCTGGTCACCGTGCTCCACGTCCTCACTTTCCGCGGCGCGCTCTGTAACCCCTCCGCGGCTCTGGAGCAGCTGTACCGGGGGTCCCTGCGGCCCCTGGCCTGCGTGGCGCTGATCGCGTGCCAGCTGGGCTCCGCGTGGCTCTCGCGCTATGCTGCGCCCTACCTGTGGTCCGCGGGACTGTCGGAGCTGCACCTGGAGCACAGAGCTGCGGGGTACCGCTGCTTCAGCCCCATACACGCCTCCCTGCCCGCGGCTGCAGCGGCGGAGATGGCCTGCGCCTTTATCCTGCAGGCAGTGATTATTAATATCGGCTTATTTACAGAAAGCCTCAGGGTGCACGTTATTGCTGCTACAATCACGAGCCTGGTTTATGCAGTGGGAAGTATTACAGGGGCAGTAATGAACCCGGCTCTGGCATTTTCCATACAGTTTCCTTGCTCTGGGCACAATTTCCTGGAGTATGCATTCGTCTTCTGGTTGGGGCCCATGTTAGGTACAGCCAGTGCAGTAGCTGTGTTTGAGAAGATAATTCCCTTTCTACTGAAGAAAGATTCACACTGGAAGAAAATCCAGTAAATGAAGGGGACCAAGACAAAGAACTGTGAACATCTACCTCAATAATTCTGTCTTAAtcctaatgttttatataatctTTTATAACGTTATAAATAATCTCTTAATATTCTTTATATTGTAATCTTTCTAGTATTCTCAGGATTCTCAGGAGTTTTAATTACAACTTTTAAAATAGGAACTTATATTTTATGGATAAACAGgtatgtaagtgtgtatgtatgaTAAGCAGTTTGTATGATAAGCAGGTATGTAAGTGTGTATACAGTATGAGTGagacactgtatatatatttttagatggaAGAAATTTGAAGGAAATTTTAAAGCTACCTTTTAAAAATCTGGAATAAAACTTGATTGGGGAGGATCCTCCCCTCACCAAAAAACCCATAGTGGACCTAAAGTAGAACCTCTGGTTAAGATTAATTCTGTATCTCTGATGTTTTCGTTCCAagtgtattaatatatatatcttcaAATATGTTCAAAGATAAGCCTgaaatgagagaaagtgagtTATCCTGTCGGTGTGCTGACAGTGacatacagtattaataacAAGAGCAACaacaattactactactactattatactGGAAGCTAAAGTGTGGTCTTACAACACCATGTTACAACAAGAAGCATAAAGCAGTATgtaaaatattagaaatgatAAAAGTGCATCTCCAGCTCAGTTTGTACTTTCATCTCTGAACAATTTtgattttaatcaaaataaaatctgGAATAAAGATCTATATAGCATCTCA

Function

GO: NA

KEGG:

id description
K09870 AQP11; aquaporin-11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007244787.3 True 1731 mRNA 0.47 3 4383131 4389029

Neighbor

gene id symbol gene type direction distance location
ranbp3l NA coding upstream 3779 4354934 ~ 4379352 (+)
LOC111195096 NA coding upstream 45436 4332873 ~ 4337695 (+)
LOC103042678 NA coding upstream 139102 4242168 ~ 4244029 (+)
LOC103029394 smad4a,LOC108435141,LOC107559658,LOC107668639,LOC107741365,LOC104924734,LOC107373891 coding upstream 1193431 3178378 ~ 3189700 (+)
LOC103031084 NA coding upstream 1209575 3170196 ~ 3173556 (+)
LOC103026990 ucp3,LOC103026990,LOC108433282,LOC108277383,LOC107578242,LOC105890488,LOC107743402 coding downstream 49011 4438040 ~ 4444030 (+)
ucp2 ucp2,ucp2b,LOC106567822 coding downstream 63225 4452254 ~ 4457565 (+)
rab6a rab6a,LOC106603351,LOC107741150 coding downstream 80063 4469092 ~ 4487880 (+)
LOC103024425 fam168a,LOC108433286,LOC108277059,LOC107600264,LOC107594362,LOC105011043 coding downstream 114089 4503118 ~ 4525930 (+)
LOC103024108 LOC108433287,LOC108276817 coding downstream 138542 4527571 ~ 4562681 (+)
G173259 NA non-coding upstream 66659 4313844 ~ 4316472 (+)
G173232 NA non-coding upstream 133168 4248872 ~ 4249963 (+)
G173182 NA non-coding upstream 336787 4046083 ~ 4046344 (+)
G173121 NA non-coding upstream 341171 4008213 ~ 4041960 (+)
G173119 pdlim5b,LOC108435134,LOC108277016 non-coding upstream 377474 3958740 ~ 4005657 (+)
G173268 NA non-coding downstream 4045 4393074 ~ 4400580 (+)
G173270 NA non-coding downstream 13007 4402036 ~ 4476650 (+)
G173272 rsf1b.1,LOC108277234,LOC107697440 non-coding downstream 19923 4408952 ~ 4410779 (+)
G173278 NA non-coding downstream 63840 4452869 ~ 4490753 (+)
G173279 mrpl48 non-coding downstream 74401 4463430 ~ 4466951 (+)
gdnf gdnf,LOC107653769,LOC107752627,LOC107692037,LOC107569368,LOC107727951 other upstream 252649 4118034 ~ 4130482 (+)
G173111 LOC108435134,LOC108277016 other upstream 451140 3908942 ~ 3931991 (+)
G173094 NA other upstream 639926 3740302 ~ 3743205 (+)
unc5c unc5c,LOC108435138,LOC108277026,LOC105911728,LOC106564027,LOC105025160,LOC106568183 other upstream 643395 3465133 ~ 3739736 (+)
LOC103031931 LOC103031931,LOC108435131,LOC104953549 other upstream 1657055 2718609 ~ 2726076 (+)
G173397 NA other downstream 354540 4743569 ~ 4744249 (+)
ptbp3 ptbp3,LOC106592370 other downstream 411600 4800629 ~ 4904202 (+)
nrarp nrarp,nrarpa other downstream 714698 5103727 ~ 5152836 (+)
G173501 NA other downstream 794462 5183491 ~ 5183777 (+)
LOC103041160 NA other downstream 2147298 6536327 ~ 6541379 (+)

Expression


Co-expression Network