G68731


Basic Information

Item Value
gene id G68731
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 690048 ~ 691318 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU78316
CGGAGCAGCTGCCTAGAGAGATATTCAGAGACCCTCCGTGAGAAAGCTTTAATATAAAGAGAAAAGACATTTAATACAGCAAAAAGATTATATTTCTGAATGGGTGCGACCACATGAAGCTGTCACCGGGGTGAGAAGACGACGAGGCAGGGATTTGTGAAATAGAAGCTGATGCAATCCAACGAAGAATCGGAGTGTTGCAAATGAGTTTGTTTGAATATATGTGAAGTTATTGCCTTGGCTGGGTTTTTTTGTTTCTATATGTTTCTTTCTACGTGATCTCCTGCGAGAGTTTCCTGTTTTGTGCCATATTTAATCCTTTTGGAGAGGGATCGTTTGTATTGGACGCGATTAAATGTGCACAATGGCGAGCTGCCCACGGACCTGTTTCCAGTTTGAACTGTGCTTAGAAATCATCAACTGGTAGGAGAATTCCAATTTTTCTTGTTTTTGGACACAAAAGACTTTTATTCGTGGAATCCGTTTGATATTTTTGCTTTTAAAAAGGAGGGACTTATTTTTCGAACTAGAACTGATTGAAAGAGTTCAACAACTTTTTGAACTGAATCATTTGATTCATGAACTTTGGTCAACTGAATCAATTAATTGATTTATGCATTTTCAACTCATATTGTTGAATATACTGTTGAGTTTGAAAGGAAAAGTGATTTATTGCAAGAAATTCTGAATCACATTCTGTGTTTTGGGTCAAATTGAATGTCCAAATGTATTTCTTTTGTACATTTTGGTTATTGAATGTGGTATTTTGTTGAAGGTTATATTATTGTAAAATACTTTGCTCAAAGTGAAAGGAACAGACACATTGTTTTTGAGATACATTATTTTTGAGAATTTTCTTTATTTTTTACATTGTGTGAAACTTCTTCAAATTGAATTGAAGCTGTCAAGCTGTTGAATTCTTGGTCCTATAAGAAACGACAGAAGAGTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78316 True 950 lncRNA 0.35 2 690048 691318

Neighbor

gene id symbol gene type direction distance location
CI01000012_00644021_00646785 NA coding upstream 42973 644021 ~ 647075 (+)
CI01000012_00593086_00594741 NA coding upstream 94583 592126 ~ 595465 (+)
CI01000012_00502185_00516358 NA coding upstream 173140 500151 ~ 516908 (+)
CI01000012_00318129_00318595 NA coding upstream 370630 318129 ~ 319418 (+)
CI01000012_00194370_00195347 HCAR1-3 coding upstream 494372 193903 ~ 195676 (+)
CI01000012_00886127_00889703 NA coding downstream 193802 885120 ~ 890337 (+)
CI01000012_00979848_00986445 NA coding downstream 288530 979848 ~ 986745 (+)
CI01000012_00991831_01027918 NA coding downstream 299857 991175 ~ 1028035 (+)
CI01000012_01054663_01055748 NA coding downstream 363345 1054663 ~ 1058353 (+)
CI01000012_01060250_01062758 NA coding downstream 368867 1060185 ~ 1062758 (+)
G68726 NA non-coding upstream 3898 685648 ~ 686150 (+)
G68696 NA non-coding upstream 11576 676995 ~ 678472 (+)
G68719 NA non-coding upstream 30580 659203 ~ 659468 (+)
G68699 NA non-coding upstream 55434 634409 ~ 634614 (+)
G68694 NA non-coding upstream 57853 631982 ~ 632195 (+)
G68740 NA non-coding downstream 12559 703877 ~ 705039 (+)
G68750 NA non-coding downstream 41530 732848 ~ 733205 (+)
G68753 NA non-coding downstream 51884 743202 ~ 743914 (+)
G68765 NA non-coding downstream 74302 765620 ~ 766677 (+)
G68771 NA non-coding downstream 83862 775180 ~ 775815 (+)
G68725 NA other upstream 5192 683523 ~ 684856 (+)
G68660 NA other upstream 154095 535566 ~ 535953 (+)
G68282 NA other upstream 629516 26390 ~ 60532 (+)
G70029 NA other downstream 1931160 2622478 ~ 2631385 (+)
CI01000012_04424569_04425090 NA other downstream 3728921 4424569 ~ 4425756 (+)
CI01000012_04495631_04501066 NA other downstream 3807135 4495631 ~ 4501066 (+)
CI01000012_05177587_05180517 SRSF5A other downstream 4485577 5176895 ~ 5180970 (+)

Expression


Co-expression Network