kcnj15 (kcnj15)


Basic Information

Item Value
gene id kcnj15
gene name kcnj15
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 31112015 ~ 31116695 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007247278.3
CAAGGACAGTGTAGGAGTGTGATAATGCTTTTTAGGGCCTAAAGGTTTTAGATTTCCTTCTTgggagtatatgtgtgtgtgtgtgtttgtgtcctgTGGGCTTTATATCGGCGTGTTTAGAGTGAAAACAGTCTGAAATGTGGCAGCACAGTACAGTGCAGGCACATTGAACTCTTTTCATTCCCCAGACAAGCCGGAATGGAGAGAATGGATGAGGGAGGAGTTCAGAAGAAAACCTGCCTCACAGGTGGCTGCTTTTCCTTGTAGTTCTTCCCCTGTCTTTGTTCTTATTAACAAGTCATCAATTGTGCCCGAGTTCAGAGAATGTAAGCAAGGACAATAGAGAAACCAAGGGCATTTTAAAATTCGTCAAGGGAGGTGAAAGTCATCCGGTTTCACATTATGTTTAAGTGGCAGTCTGGACACAATCAGATGCAAAGCTGAGAAAGGAAAGGAGCTGGAAATAATTTGCTCCCTACTTTAAAACAAGATCCTAAACTCAACCTTCCCTGAACCTCACCTGAATGTTCTAGAAATCCGTCTAGAATGAGCGGAACTCTCCAGCGACGACTGGTGTCAAAGAATGGGCACAACAATGTAAAAATTGACAATGTGGAGGGCATGGTAAAACTTTACCTACACGACATCTGGACGACAGTAGTGGACATAAAGTGGCGCTACAAGCTTACTCTCTTTGTCTGCACTTTCTTGGGCACATGGTTTATTTTTGGCGTCCTCTTCTACCTCATCGCCATGAGCAACGGGGACTTGGGGCAGACACCCGAGTCCAACCACACTCCTTGTGTCATGAATGTAGGGACTCTGACAGGGGCGTACCTTTTCTCGCTGGAGTCTCAAACCACCATCGGCTACGGCTTCCGCCACATCTCAGAGGAATGTCCGTTGGCCATCTTTACTCTGGTGGTGCAACTGGTTTTCACAGGCCTTGCTGAGATCTTCGTGACTGCTGCCTTCTTGGCCAAGCTGGCCAGGCCAAAGAAGCGAGCCGAGACTGTCATATTCAGCCAGTCTGCGGTGATCTGCTGGCACCGGGGACAGACATGCTTGATGGTGAGGGTGGCCAACATGAGGAAGAGTCTTTTGATCCAGTGCCAAGTGTCTGGAAAGCTGCTGGCTCCTTACGTAACTCAAGAAGGTGAGAAGATTCTGCTTCACCAAGAGCCTGTAGACTTTCGTCTGGACTCCAGCCAGGAGTGTCCCTTTCTTCTCCTTCCCCTTACTTTCTACCATGTTCTAGATGAGAACAGCCCTCTGGCCAGCCTCACGGAAGAGAACCTGAACTCCAGAGATTTTGAGCTGGTGGTAACCCTCAACGCAACCATGGAATCTACCGCCTCCACATGCCAGAGTCGCACCTCGTACCTCCCTCAAGAATTTCGTTGGGGTTACGATTTTAAGCCGCTGGTGTTTAGCACACCTGGGGGCAGGTACATCACAGACTTTGACCATTTTGATGAGGTTGAAAAGAGGAATGAGCCCTTACTGCTCCAGAATGTAGAGATGATAAAACTGCAGATGGAGGAAGAGTACAggaaagagtaaaagaaaggTAGAGGCTTCGGTAGCATGGACACATGCCACTGGACTGAACTACCAACAGGGAGTGCAGTAATAGAATACATAGTAGAGTATCTACAGAATCATGGAGGTTAGCTCAAGCTAAACTAAGACCCAGTCTCATTTCACATTTGTACCTTTACCCCTAGTGTCACCCTTAGTGACGTTTGGAAATGGTTGAAACGCTCCCCATTAAAAATGGCACAACATTTCAAGCACCTGATGcataattgaaataaataaataaaaaaacacacctttaTCAACAGCTACTAGTAGGTGACCGTGCCAGTCTGTTGCAATAGCAGAAGAATGTTGAAGTTCTAAAACCTtacaaaaattatttattatcgtTCACCCAATTACTCTGTAATAGGGAGCAGAAGAAAGCTTACAAAGATACAAtgtaactgctgcaccatttaaggtggagcaaGAAACACCAGACAGATCAAATGTATGCATTATTCCTATGTGTTGTAAGGAAAATCTAGGCCATCTGGAGGTCCCTAatgaagatttttaaaaatacatttttttaaagaatatttttaaagGAAATTATGGTTTAATATCCTAGATATAAAACATTTGGATTTGCAAATTTGCAAGCCCTTCCCAAgctgaatgcaaaaaaaaaaaaaaaaaaaaaaacacagaaatgtgAAATGTCTTCCTAAGACATTTACACTAATAGAGTTATTTAAAATTCAACGAGGTTCAACAatcaaattgacaaaaatcatctttaatctgttaaacatttttaaggGAGCCAAAACATAGAAAACATTTACTGCACAATGTCTCTTAAAATTCAACCATCTACAGGTCGAGCACCTAAactggaaaatgttttttaaaagcacactacacaactctagctgttttttttgtactatacCGGTTTCTGATTTATGCAGCTCATTGTAAAACACAATTCAAACCAAATCTGCACAAAAAAGGGCTACTTAGTAAAGTAAATACAAATATCTGGTCTGAACTTTACTTAGGAAGCCACTTTGCTAAGTAGCAAGAGATGGAAAGGTAGATATCTAGATTAGCTAtaagcaaaacaacaatatttagccagcgagctagctaactgtcTAAGTGAACATCCAGCAATAGTAGTTGAGAACTCTTTACCTGTTCCTTGCTGCTCTGACATAGGCTTTCACTGTTTGCTCGTAACTATAGCCATCGTAATTTTAGAGCCGCTAgcaatagaccactgaagtcgtgcttcattctgtagtcctcgtaCGG

Function

symbol description
kcnj15 Orthologous to human KCNJ15 (potassium inwardly rectifying channel subfamily J member 15).

NR:

description
PREDICTED: ATP-sensitive inward rectifier potassium channel 15

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005242 inward rectifier potassium channel activity molecular_function

KEGG:

id description
K05008 KCNJ15, KIR4.2; potassium inwardly-rectifying channel subfamily J member 15

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007247278.3 True 2847 mRNA 0.43 2 31112015 31116695

Neighbor

gene id symbol gene type direction distance location
dyrk1a dyrk1a,dyrk1aa,LOC108411986,LOC107676490 coding upstream 161085 30935257 ~ 30950930 (+)
ttc3 NA coding upstream 187066 30876529 ~ 30924949 (+)
ripply3 NA coding upstream 257860 30850265 ~ 30854155 (+)
sim2 sim2,LOC106603444,LOC107572951,LOC107676491 coding upstream 321278 30761463 ~ 30790737 (+)
riox2 mina coding upstream 437237 30657193 ~ 30674778 (+)
ets2 ets2 coding downstream 121093 31237788 ~ 31244884 (+)
mpzl1 LOC108423808 coding downstream 178370 31295065 ~ 31314439 (+)
LOC103032011 NA coding downstream 232546 31349241 ~ 31360268 (+)
LOC103030242 chordc1 coding downstream 956932 32073627 ~ 32086443 (+)
LOC103040533 grm5,grm5a,LOC108423821,LOC107693909,LOC107720647,LOC107718729 coding downstream 995661 32112356 ~ 32187729 (+)
G180228 NA non-coding upstream 15010 31096373 ~ 31097005 (+)
G180174 NA non-coding upstream 126774 30985012 ~ 30985241 (+)
G180173 kcnj6,LOC107744206 non-coding upstream 138316 30964001 ~ 30973699 (+)
G180167 NA non-coding upstream 184681 30926205 ~ 30927334 (+)
G180166 NA non-coding upstream 196865 30914616 ~ 30915150 (+)
G180233 NA non-coding downstream 2418 31119113 ~ 31120310 (+)
G180237 NA non-coding downstream 93517 31210212 ~ 31230637 (+)
G180260 NA non-coding downstream 278291 31394986 ~ 31395348 (+)
G180263 NA non-coding downstream 305775 31422470 ~ 31423208 (+)
G180264 NA non-coding downstream 306917 31423612 ~ 31426111 (+)
LOC103038954 zgc:101846,LOC106525086,LOC108416226,LOC101161532 other upstream 3586574 27524302 ~ 27525441 (+)
rnasek rnasek,LOC107554319 other upstream 4195671 26913750 ~ 26916344 (+)
LOC103024073 LOC108424537 other upstream 4232932 26830637 ~ 26879083 (+)
smpd1 smpd1,LOC107718723,LOC107720657,LOC107556869 other upstream 5854546 25244161 ~ 25257469 (+)
LOC103032894 LOC108424565 other upstream 6657393 24447792 ~ 24454622 (+)
G180235 erg other downstream 22649 31139344 ~ 31151095 (+)
G180266 NA other downstream 316503 31433198 ~ 31433909 (+)
G180460 cct8,LOC100304907,LOC107693911,LOC107701129 other downstream 1148303 32264998 ~ 32273798 (+)
ufm1 ufm1,LOC107701138 other downstream 1933547 33050242 ~ 33067932 (+)
LOC103026201 LOC108277347,LOC108423746,LOC106604019 other downstream 3056229 34172924 ~ 34328970 (+)

Expression


Co-expression Network