LOC103043725 (bcl7a,LOC108410533,LOC107704131,LOC107706784,LOC107722340,LOC107554537)


Basic Information

Item Value
gene id LOC103043725
gene name bcl7a,LOC108410533,LOC107704131,LOC107706784,LOC107722340,LOC107554537
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 1713634 ~ 1718947 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007250277.3
TTCAAAAGAACCGATCAGAAAGAGTCGGTTCAGGAGAACGCTTGTCCGTCGTTAATCAGcgtgagcagcagcagcggtgTCGAGAGCAGCGATGTCTGGCCGCTCAGTCCGCGCGGAGACCCGGAGCCGAGCGAAAGATGATATCAAGCGGGTCATGGCCGCCATTGAGAAAGTACGAAAATGGGAGAAGAAGTGGGTGACTGTTGGAGACACTTCATTACGTATTTTTAAATGGGTACCGGTGACTGAACCCAGGACAGATGATaaaaataaaaagaagaaaggcAGAGATGAGAAGTACGGCTCAGAGGTCACCACTCCAGAGAACAGCTCCTCCCCAGGGATGACTGACATAAACGATGAGAACAGCAATCAGAGCTCCATTGTCGACATTTCCCCAGTGAAGCCGGAAAACAGCTGTAGCACAAGTCCAGCACCAGAGGCCACTGCAGCGTCTCAGAGCAACGGGAGTGAAAATAAAAGCAGCTCTACTTCCTCAGAGACCTCAGCACCAGAGAAGGAGGCTTCATCAGAAACCTCCCAAGCTACTCAGgaaCAGGAAGAGGAGGCTCCTCCGAGTAAGAAAAGCAGACACGAGTCTTCCTCTCAGGACTGTGGAGAAAGCTGAAGCTCTGTCATCCATCAGGGTGAAGAGGAGTGCTCCTTTATTTCAGCCCTCTTATCAAAATGTTCACACTCCGCGTTGCCAAGGAAAGCTTTTTCACCCTCTCCTCCATCCTCCTGCTTGTCCAGTTGTAGGGAAGGATGGTGCCACCATCACTGTGCCTGAGAAAGGTCTAATGAAGAGCACTGACCTCCAGCAGTGGAACACTGTTCTCTGTGATCTTCACCCTTCCTGACTCGAAAACCTCTAAAccccaatctctctctcatatataaAGCATTACGTTTTGATAAGAAGCGTCGGTGCACTGATTGGTTGTACGGTACGGTTTTGCTGCTGTAGTCGTATTTGTTTTAGGAACCCTTAGAACTCTTTTGGTTTGGATTTGGGTTTAATAAAATGCTTGACTACATTGTGAAATAATAAAGGATAGGGATGCACTGTAATTGAAGATATTGTGTTGGCCTGCTGCCACCGCTGCAGAAAAAAGTCCTAATGTTAGAGGAATCACTACAAGAGTCTttgttcagtataaattattcagtcctTTCGCTTATTCGGCCAAACaccaaaagtgcttttttgccattttcagaTAATTTAATTCGCCAAAtattcggtgcatccctaaCAAGCAAGGATGTTTAGTATCTAGCAGAAAATCTTAGCACATTCCTACTGGGTGGTGTTCTTGTGTATCATGAAGgttgattttattttgtgtattttattttttgtaactcTCCTGAACTATTGTTTTAAGTATCATTTTAAAcagtgactgtagaaaacatggatGCTGTTGTTCCATTTGTATCCGTTAATGacagcgtgaacgagcaggtcagtttccgtttaggtagctgcactgttaaaatagcaatctgccgaAGTCAAAgtgcatctggctcttaaagagaatgatgagcaaactgattggtttattttaccttatgcccaaaacacacccatgatttgcacgctgcgcaaggtgtacttttcccgtcattatgatagcaatgATATGATTTAAAGATTGTCCAGTAATTGTAATGCCCAACAGTAAAAGTGAAGTTCATGAATTTTATTACCaaatctaatatttatttttccatcaaATTACAATTTCAGAGCTCAGCTCTGTGTATTCTGTTTATCACAGAGACAAACcattaaaagaagaaagaataaagttttaaacacTATTTGGACTCAGTTCAGACcagaaaatactgtaaatgtgaCGAGAGCGCTGATTGAGGCCAAGTACAATTACTACCGAGTCCTGTTTACCAAGTCTGGTTGCTAATTGGCTTACAGCTAAaagagtaaaattaaaaatgtactgcaaccagccagcagaggcgctagacctgtggtggcttcacatTTGAGAGACGCTGTGCTGCACACTGTGCTATAACGCTGTGCTATAACTCTGTGCTGTGCGCTGTGCTttgttttctacagtcactgTTTTTAACAGTTCACTGACACTACATATATACGTTATGGCTGTAGCACCGGGTACTGTGGTGGAACTGATGCGTAGGAACAGCCCCCAGTGTGAAGTTCTAGATTATAATgcatgtaaattattattactacatgTACTGTAGGGTTGTTGAGGGGGTTTTAGTAGAAATATATGTTACAAGACTGTAAAAGTAAGCCTCTAAATATACCTCAtagccagcactgctggagttttGATAATAGTGATGGAACCCggattcattttattcatattaCCCTCATAATTTGACAGGAAGTGAATTGAGTGGAATACATTGGCATTTGCCAGTTCACCAGGCATAGCTGCCAATACACACAGcttaacacacaaacaaaaacagccaGATACATTTGGGTACAATTTTAGTGAACTTTTGATTGTTTTATCctgtttgcattttatttatttcaccattagtgctgttttaatcatgctcaaatgttttaataaagatGTTAAATCAGA

Function

symbol description
bcl7a Is expressed in central nervous system; retina; and tail bud. Orthologous to human BCL7A (BAF chromatin remodeling complex subunit BCL7A).

NR:

description
PREDICTED: B-cell CLL/lymphoma 7 protein family member A-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007250277.3 True 2606 mRNA 0.42 6 1713634 1718947

Neighbor

gene id symbol gene type direction distance location
LOC103044833 LOC108410534,LOC108276727 coding upstream 709 1709405 ~ 1712925 (+)
denr denr,LOC107722339,LOC107706783 coding upstream 4451 1704504 ~ 1709183 (+)
snrnp35 snrnp35,LOC107658469 coding upstream 47423 1663256 ~ 1666211 (+)
LOC103046457 kmt5a,LOC108425183 coding upstream 51813 1657106 ~ 1661821 (+)
LOC103035435 LOC108425189,LOC108276927,LOC107706776,LOC107554527 coding upstream 180865 1517362 ~ 1532769 (+)
dusp26 dusp26,LOC107720817 coding downstream 28574 1747521 ~ 1753757 (+)
LOC103042387 LOC108410540 coding downstream 41530 1760477 ~ 1766925 (+)
LOC111194965 mrps24 coding downstream 240138 1959085 ~ 1961614 (+)
polm polm coding downstream 255298 1974245 ~ 1981134 (+)
LOC103032544 NA coding downstream 271818 1990765 ~ 1993332 (+)
G172576 NA non-coding upstream 16124 1694865 ~ 1697510 (+)
G172548 rilpl1,LOC108410543 non-coding upstream 36208 1674159 ~ 1677426 (+)
G172522 NA non-coding upstream 243732 1436426 ~ 1469902 (+)
G172521 NA non-coding upstream 288194 1423606 ~ 1425440 (+)
G172520 NA non-coding upstream 310518 1401798 ~ 1403116 (+)
G172600 NA non-coding downstream 54278 1773225 ~ 1776601 (+)
G172733 NA non-coding downstream 146154 1865101 ~ 1882035 (+)
G172735 NA non-coding downstream 155854 1874801 ~ 1875147 (+)
G172736 NA non-coding downstream 166261 1885208 ~ 1888464 (+)
G172737 NA non-coding downstream 169595 1888542 ~ 1889596 (+)
G172552 NA other upstream 84829 1626799 ~ 1628805 (+)
zswim6 zswim6,LOC108425190,LOC107704169,LOC103369940,LOC107706746,LOC105014808 other upstream 168678 1383495 ~ 1544956 (+)
G172517 NA other upstream 171483 1507320 ~ 1542151 (+)
LOC111194999 pitpnb,LOC108425199,LOC107602250,LOC107709228,LOC107706770,LOC107704163,LOC107653151 other upstream 847258 843788 ~ 866376 (+)
LOC103038248 NA other upstream 1127436 579323 ~ 586198 (+)
LOC103041266 NA other downstream 120404 1839351 ~ 1850216 (+)
G172725 ogdh,LOC107554543,LOC107714098,LOC107656768 other downstream 134335 1853282 ~ 1855754 (+)
G172770 h2afvb,h2afva,LOC107386217,LOC105007341,LOC107668744,LOC107599604,LOC103039302 other downstream 275761 1994708 ~ 1997362 (+)
LOC103031931 LOC103031931,LOC108435131,LOC104953549 other downstream 999662 2718609 ~ 2726076 (+)
unc5c unc5c,LOC108435138,LOC108277026,LOC105911728,LOC106564027,LOC105025160,LOC106568183 other downstream 1746186 3465133 ~ 3739736 (+)

Expression


Co-expression Network