aldh7a1 (aldh7a1)


Basic Information

Item Value
gene id aldh7a1
gene name aldh7a1
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 24489798 ~ 24500429 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007252432.3
GCCACGCGCGCACACGCAGCCCTGCACTTGGCTTCAGCATGCAGCGCGTTCTGCTCCTCACCGCGCTACGGCACTCTGCCCTCACTGCTAAAGTCTGCTCTGTCCGCTTCCAGCCGTCTGCAGCCATGTCTACACTCCTCATCAACCAGCCCAAATACGCCTGGCTTAAAGAGCTGGGTCTGAGCGAGGACAACGACGGGGTTTACAACGGCACCTGGGGAGGCAAGGGCGAGGTTGTCACATCTTACTGTCCTGCTAATAATGAGCCCATTGCCAGAGTGCGACAGGCCACCTTGGCGGAATATGAGGAGACGGTACAGAAAGCCAGAGAAGCATGGAAAGTGTGGGCAGATATCCCTGCTCCCAAAAGAGGTGAAATTGTGAGACAGATCGGTGATGCTCTACGAAAGAAGATCAAAGTTCTTGGCAGCTTGGTGTCTCTGGAGATGGGGAAGATCTATGTGGAGGGGGTTGGCGAAGTGCAGGAGTATGTTGATGTGTGTGACTATGCTGTCGGGCTCTCTCGTATGATTGGCGGCCCTGTTCTGCCCTCTGAAAGACCAGGTCATGCCCTTATTGAGCAGTGGAACCCTGTGGGTTTGGTGGGCATTATAACTGCCTTTAACTTCCCTGTGGCAGTGTATGGCTGGAATAATGCTATTGCCCTCATCTGTGGCAATGTGTGCCTTTGgaAAGGAGCTCCAACCACACCTCTCACCAGTGTAGCCGTTACAAAGATTGTAGCTGAGGTGCTGGAACAGAATAACTTGCCAGGTGCTATCTGCTCTATGACATGCGGTGGAGCTGACATTGGCACAGCATTATCTAAAGATGAACGGGTCGACCTGGTGTCCTTTACTGGCAGCACTCAAGTGGGCAAACAGGTGGCTCTGATGGTGCAGGAGAGGTTTGGTCGCCAGTTGCTAGAGCTGGGTGGAAACAACGCCATCATTGTTTTTGAAGATGCTGATCTGAACCTGGTGGTGCCTTCGGCTCTCTTTGCCTCTGTGGGAACTGCAGGCCAGCGCTGCACCACAACCAGGAGACTGATGCTGCACGAGAGTGTTCATGATGAGGTTGTAGAAAGGTTATCCAAAGCTTACAAGCAAGTTCGAATTGGTGACCCCTGGGATCctaGTACACTGTATGGACCACTTCACACCAAGCACGCTGTTCAGCAGTACCTGGCTGCCATAGAGCAGGCGAAGCAGCAGGGCGGCACTCTTGTGTGTGGTGGAAAGgtaatgGATCGGCCTGGTAACTATGTGGAGCCTACCATCTTCACTGGACTGGCACATGATGCCCCTATTGTTCACACAGAGACCTTTGTGCCCATTCTCTATGTGATCAAGTTCAAgACAGAGGAGGAGGCCTTTGCCTGGAATAATGAAGTCAAGCAAGGCCTTTCCAGCAGCATCTTCACAAAGGACATGGGCCGAGTGTTCCGCTGGCTAGGACCCAAAGGCTCAGACTGTGGCATCGTCAACGTCAACATTCCAACCAGCGGAGCTGAGATTGGTGGAGCTTTTGgaGGGGAGAAGCACACCGGAGGTGGACGTGAGTCAGGCAGCGACTCATGGAAGCAGTATATGAGGAGGTCCACATGCACCATCAACTACAGCAAGGACCTCCCACTGGCACAAGGAATCAAGTTTGAGTAGCTTGTAGCAAGTCAACGACTGTTACCTGAACAGAATTTTTGGCAAAGGAACAAAAAACACTAATTCTTTTAGCTCTGCGCTACATTATACTACTCAAGATTTTAATTCTCAACTGTAAACCACCTTCAGCAGTAATTTTCTGGTCAGTTTGTAATACTCAGTATGATGTGTTTGTTTTGAGCTCATTGATGAACCGTTAAaggtttaattattatataaaaaaagtctgATGTCATACAAAAGGTTAAAAAATCTTGCCGGTCTAGTattgtgagctgttttttctaAGCACTTATCTGTCAGTGTTACCTTGAAATAGCAGGTGCTTTGTACAAATAAATCATGCctttatttttgaaggaaatttCTGAAATGA

Function

symbol description
aldh7a1 Enables alpha-aminoadipate acetyltransferase activity. Acts upstream of or within camera-type eye development; cartilage development; and pectoral fin development. Is expressed in several structures, including alar plate midbrain region; fin bud; musculature system; nervous system; and pharyngeal arch. Used to study epilepsy and pyridoxine-dependent epilepsy. Human ortholog(s) of this gene implicated in pyridoxine-dependent epilepsy. Orthologous to human ALDH7A1 (aldehyde dehydrogenase 7 family member A1).

NR:

description
alpha-aminoadipic semialdehyde dehydrogenase

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor molecular_function

KEGG:

id description
K14085 ALDH7A1; aldehyde dehydrogenase family 7 member A1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007252432.3 True 2037 mRNA 0.49 18 24489798 24500429

Neighbor

gene id symbol gene type direction distance location
LOC103023192 LOC108424566,LOC108277262,LOC105901058,LOC106603267,LOC105010780 coding downstream 200505 24252134 ~ 24289293 (-)
LOC103022888 NA coding downstream 239816 24234922 ~ 24249982 (-)
apbb1 apbb1 coding downstream 258134 24217172 ~ 24231664 (-)
LOC103038694 LOC108427265,LOC108277159 coding downstream 411432 23706701 ~ 24078366 (-)
ubxn8 NA coding downstream 968162 23515252 ~ 23521636 (-)
LOC103023834 LOC108424422 coding upstream 11402 24511831 ~ 24516598 (-)
march3 march3 coding upstream 46574 24547003 ~ 24586405 (-)
c20h5orf63 NA coding upstream 86831 24587260 ~ 24589663 (-)
LOC103037512 LOC103037512,LOC108423775 coding upstream 462197 24962626 ~ 24980089 (-)
kiaa1024l NA coding upstream 545785 25046214 ~ 25052132 (-)
G178855 gramd3 non-coding downstream 12279 24472432 ~ 24477519 (-)
G178823 NA non-coding downstream 196454 24291892 ~ 24293344 (-)
LOC111195074 NA non-coding downstream 291650 24197201 ~ 24198148 (-)
G178810 NA non-coding downstream 301025 24156674 ~ 24188773 (-)
G178809 NA non-coding downstream 319807 24150304 ~ 24169991 (-)
G178859 phax non-coding upstream 4636 24505065 ~ 24509510 (-)
G178862 lmnb1 non-coding upstream 24501 24524930 ~ 24542747 (-)
G178864 NA non-coding upstream 30365 24530794 ~ 24533188 (-)
G178868 NA non-coding upstream 82056 24582485 ~ 24583669 (-)
LOC111195076 NA non-coding upstream 94816 24595245 ~ 24602315 (-)
sh2d4a sh2d4a other downstream 1532572 22945161 ~ 22957226 (-)
LOC111195067 NA other downstream 1548134 22935490 ~ 22941664 (-)
G178450 NA other downstream 1817115 22672132 ~ 22672683 (-)
LOC103023660 LOC103023660,LOC108440734,LOC108276836,LOC106926931 other downstream 1980015 22501318 ~ 22509783 (-)
G178426 NA other downstream 2033019 22455497 ~ 22456779 (-)
G178982 hint1,LOC107665476 other upstream 630553 25130982 ~ 25134156 (-)
LOC103025094 zgc:171929,LOC107690845,LOC107575147,LOC107671611,LOC105905449 other upstream 702896 25203325 ~ 25207386 (-)
thsd1 thsd1 other upstream 793246 25293675 ~ 25303083 (-)
LOC103043022 LOC108410630,LOC107556853 other upstream 863503 25363932 ~ 25472244 (-)
LOC103047293 LOC108410718,LOC106581537 other upstream 1155826 25656255 ~ 25864474 (-)

Expression


Co-expression Network