LOC103029848 (ggt1)


Basic Information

Item Value
gene id LOC103029848
gene name ggt1
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 18994874 ~ 19005861 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007254974.3
AAGTTTAAAGCGACTGTAACAAATCCAGCTGGGTCTATCTTCAATCTGTCACTTCAGAGCTGCTGCCCAAACCAGAACGTTCTGAAACCTGAACCACGGATTGAAACCAGCCAGgatggTGCAGAAGTCGGTGGTGGTGGCGCTGCTGGTGCTGTTATTGGCCGCAGTGGGAACGTTTGTGGGAGTTTTCTTTGGGGTTCCGAGACCCACCACCCCTCCACCCGGCACGTACTCACtggcagcagtggcagcagacGCCGGAACATGCTCTGAGATTGGCAGGGATGTCCTGCAGAAAGGTGGATCTGCTGTGGATGCAGCAATAGCGGGGCTGCTGTGTGCTGGGCTGATGAATGCCCACAGTGCGGGCATCGGAGGCGGGCTCTTCCTCACCATCTATAACGCCAAAACAGGTCGAGTTGAGACCATTGACGCTCGTGAGACCGCCCCTGCCAACGCCTCTAAAGACATGTTTGGAAACAATACAGATCTTTCACTTACAGGTGGTCTGGCCATCGCGGTTCCTGGGGAAATACGAGGTTATGAACTGGCTCATAAGCGCCACGGGAAGCTGCCCTGGAGAGAGCTGTTCCTGCCCAGTATAAAACTGGCACGCGACGGCTTTCCATTGGGCAAAGCACTGGCAGGGGCTATCTACAGCAACCGCAACATCATCCGCAATGACAAGACACTGTGTTCAGTGTTCTGTGATGAAAGCGGAGCTATCCTAAAGGAGAATAACACCATCAGGTTCACCAAACTGGCCGACACTTTCCAGGAGATTGCAGATAAAGGTCCCAGCGCGTTCTATGAGGGAACCATCGCAGAGAATCTGATCAAAGACATCAGGAACGCAAgtgggATAATAACTCTGGAGGATCTTCAGAGCTACACTCCTGTACTAAATGAAAGTCCTCTGCAGGCTTATGTGGGCGATTTCACCATGTACACGCCCAACGCCCCATCCAGCGGCCCCATCCTCACCTTCATTCTCAACATCCTCAGTGgtttCGGGTTCTCCTCAAACAGCGTCTCCAGCACTGAGAAGAAGATCCTCTCCACTCACCGCATTGTTGAGGCCTTCAAATTTGCATATGCAAAAAGAAGTGTGCTGGGAGATCCCAGCTTCCTCAACATCACTGAGTTTATCCACAACATCACCTCAAAGAGCTTCGCCGAAGGCATCCGACACAAAATCACAGACGACTCCACGCAGCAGGAGAGTTACTACGAACCCGAGTTCTTCGTCCCTGATGATCACGGAACTTCACACATCTCCGTGCTGGCAGAGGATGGCAGCGCCGTGGCTGCAACCAGCACCATCAATCGTTATTTCGGCTCTAAGGTCATGTCCGCCTCTACGGGCATCATCCTCAACAACGAGATGGACGACTTCAGCTCTCCACTCATCACCAATAGCTTTGGTGTTCCTCCCTCACCCAACAACTTCATCAAACCCCATAAAAGGCCCATGTCGTCTATGTGTCCTGCTATCCTCTTTGATAAGAACCATAAGGTGAAGATGGTGGTCGGCGGCTCCGGCGGAACGAAGATTACCACATCAGTTGCTCAGGTGATCCTGAACTCTCTGTCCTTCAACTACGACCTGAAAAGATCAGTGGTGGAACCCAGAGTTCACAACCAGCTCAGCCCAAACATCACTCTGGTGGAGGCCGGCTTCGATCAGGCTGTGGCAGACGGTTTGGCCCAGAAGAACCACGTCATAGAGGTTCTGACGTCCACTGGCGCCGTGGTGCAGGCCATAGAGAGGCGGGGTATGTGGATCGAGGCAGTGTCTGACCCCCGAAAGGGAGGATACGCTGCAGGGTACTGATGAATCAGCATCTACCAGCAACACCACCCTTTTCTACACTTCCCCAACCGTGCCAGACCGGGCTGGACTGGACGTCCAACCAACCTAGACTGACTGAGGGACAGAACAGAACAAAGTCCTGACCTCTCTGACTCCTCCCCTTCCTCTCTCCACTGACTCAACCTCACCGCCCCTCTAAAGAGGAGCCAGCCAATCACGAGAGACATCTAcatgtgtttttgtatgtttttttgtgtgctaTATTTataattctaaataataaacagaccAATAATCAA
>XM_022681187.1
AAAGTTTAAAGCGACTGTAACAAATCCAGCTGGGTCTATCTTCAATCTGTCACTTCAGAGCTGCTGCCCAAACCAGAACGTTCTGAAACCTGAACCACGGATTGAAACCAGCCAGgatggTGCAGAAGTCGGTGGTGGTGGCGCTGCTGGTGCTGTTATTGGCCGCAGTGGGAACGTTTGTGGGAGTTTTCTTTGGGGTTCCGAGACCCACCACCCCTCCACCCGGCACGTACTCACtggcagcagtggcagcagacGCCGGAACATGCTCTGAGATTGGCAGGGATGTCCTGCAGAAAGGTGGATCTGCTGTGGATGCAGCAATAGCGGGGCTGCTGTGTGCTGGGCTGATGAATGCCCACAGTGCGGGCATCGGAGGCGGGCTCTTCCTCACCATCTATAACGCCAAAACAGGTCGAGTTGAGACCATTGACGCTCGTGAGACCGCCCCTGCCAACGCCTCTAAAGACATGTTTGGAAACAATACAGATCTTTCACTTACAGGTGGTCTGGCCATCGCGGTTCCTGGGGAAATACGAGGTTATGAACTGGCTCATAAGCGCCACGGGAAGCTGCCCTGGAGAGAGCTGTTCCTGCCCAGTATAAAACTGGCACGCGACGGCTTTCCATTGGGCAAAGCACTGGCAGGGGCTATCTACAGCAACCGCAACATCATCCGCAATGACAAGACACTGTGTTCAGTGTTCTGTGATGAAAGCGGAGCTATCCTAAAGGAGAATAACACCATCAGGTTCACCAAACTGGCCGACACTTTCCAGGAGATTGCAGATAAAGGTCCCAGCGCGTTCTATGAGGGAACCATCGCAGAGAATCTGATCAAAGACATCAGGAACGCAAgtttCGGGTTCTCCTCAAACAGCGTCTCCAGCACTGAGAAGAAGATCCTCTCCACTCACCGCATTGTTGAGGCCTTCAAATTTGCATATGCAAAAAGAAGTGTGCTGGGAGATCCCAGCTTCCTCAACATCACTGAGTTTATCCACAACATCACCTCAAAGAGCTTCGCCGAAGGCATCCGACACAAAATCACAGACGACTCCACGCAGCAGGAGAGTTACTACGAACCCGAGTTCTTCGTCCCTGATGATCACGGAACTTCACACATCTCCGTGCTGGCAGAGGATGGCAGCGCCGTGGCTGCAACCAGCACCATCAATCGTTATTTCGGCTCTAAGGTCATGTCCGCCTCTACGGGCATCATCCTCAACAACGAGATGGACGACTTCAGCTCTCCACTCATCACCAATAGCTTTGGTGTTCCTCCCTCACCCAACAACTTCATCAAACCCCATAAAAGGCCCATGTCGTCTATGTGTCCTGCTATCCTCTTTGATAAGAACCATAAGGTGAAGATGGTGGTCGGCGGCTCCGGCGGAACGAAGATTACCACATCAGTTGCTCAGGTGATCCTGAACTCTCTGTCCTTCAACTACGACCTGAAAAGATCAGTGGTGGAACCCAGAGTTCACAACCAGCTCAGCCCAAACATCACTCTGGTGGAGGCCGGCTTCGATCAGGCTGTGGCAGACGGTTTGGCCCAGAAGAACCACGTCATAGAGGTTCTGACGTCCACTGGCGCCGTGGTGCAGGCCATAGAGAGGCGGGGTATGTGGATCGAGGCAGTGTCTGACCCCCGAAAGGGAGGATACGCTGCAGGGTACTGATGAATCAGCATCTACCAGCAACACCACCCTTTTCTACACTTCCCCAACCGTGCCAGACCGGGCTGGACTGGACGTCCAACCAACCTAGACTGACTGAGGGACAGAACAGAACAAAGTCCTGACCTCTCTGACTCCTCCCCTTCCTCTCTCCACTGACTCAACCTCACCGCCCCTCTAAAGAGGAGCCAGCCAATCACGAGAGACATCTAcatgtgtttttgtatgtttttttgtgtgctaTATTTataattctaaataataaacagaccAATAATCAA

Function

symbol description
ggt1 Enables glutathione hydrolase activity; leukotriene-C(4) hydrolase; and peptidyltransferase activity. Involved in carboxylic acid metabolic process; glutathione catabolic process; and zymogen activation. Located in plasma membrane. Implicated in gamma-glutamyl transpeptidase deficiency. Biomarker of several diseases, including biliary atresia; diabetes mellitus (multiple); diabetic neuropathy; fatty liver disease (multiple); and liver disease (multiple).

NR:

description
PREDICTED: gamma-glutamyltranspeptidase 1

GO:

id name namespace
GO:0006749 glutathione metabolic process biological_process
GO:0003840 obsolete gamma-glutamyltransferase activity molecular_function

KEGG:

id description
K18592 GGT1_5, CD224; gamma-glutamyltranspeptidase / glutathione hydrolase / leukotriene-C4 hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007254974.3 True 2112 mRNA 0.52 13 18994874 19005860
XM_022681187.1 False 1963 mRNA 0.52 12 18994874 19005861

Neighbor

gene id symbol gene type direction distance location
LOC103029209 gpat4,LOC108440151,LOC108277038,LOC107746208,LOC107558124 coding downstream 111703 18873117 ~ 18883171 (-)
LOC103028676 NA coding downstream 124733 18847995 ~ 18870141 (-)
brf2 NA coding downstream 147493 18841071 ~ 18847381 (-)
LOC103045990 aak1b,LOC108440145,LOC107583399 coding downstream 203822 18746248 ~ 18791052 (-)
LOC103045381 LOC108440153 coding downstream 303777 18686670 ~ 18691097 (-)
LOC103030174 NA coding upstream 32449 19038310 ~ 19048336 (-)
LOC103031534 NA coding upstream 47130 19052991 ~ 19056252 (-)
rhof rhof,LOC108425170,LOC105014892,LOC106568222 coding upstream 57689 19063550 ~ 19072529 (-)
LOC103047211 LOC108425134 coding upstream 94001 19099862 ~ 19106136 (-)
dgcr2 dgcr2 coding upstream 106173 19112034 ~ 19121657 (-)
G177678 NA non-coding downstream 7459 18983812 ~ 18987415 (-)
G177669 NA non-coding downstream 39934 18950852 ~ 18954940 (-)
G177644 NA non-coding downstream 165587 18827603 ~ 18829287 (-)
G177617 NA non-coding downstream 196740 18743510 ~ 18798134 (-)
G177626 NA non-coding downstream 254295 18736864 ~ 18740579 (-)
LOC111195061 NA non-coding upstream 69386 19075247 ~ 19076916 (-)
G177688 NA non-coding upstream 69514 19075375 ~ 19078334 (-)
LOC103033103 NA non-coding upstream 71710 19077571 ~ 19077976 (-)
G177685 NA non-coding upstream 104300 19110161 ~ 19159146 (-)
G177717 NA non-coding upstream 138417 19144278 ~ 19147039 (-)
LOC103029522 LOC103029522,LOC107746207,LOC108440152,LOC107689072,LOC107658587,LOC107583405,LOC107758669,LOC106564675,LOC105890914 other downstream 60274 18887028 ~ 18934600 (-)
LOC111195059 NA other downstream 376262 18614892 ~ 18618612 (-)
nsd3 whsc1l1,LOC107720716,LOC107687514,LOC107705078 other downstream 463239 18485642 ~ 18531635 (-)
G177568 NA other downstream 591866 18397582 ~ 18403008 (-)
G177526 NA other downstream 820349 18171849 ~ 18174525 (-)
G177704 NA other upstream 85285 19091146 ~ 19092146 (-)
LOC103035567 LOC103035567,LOC108425166 other upstream 113925 19119786 ~ 19128123 (-)
LOC111194984 sh2d4a other upstream 732788 19738649 ~ 19739313 (-)
G178173 NA other upstream 2285661 21291522 ~ 21295833 (-)
G178267 grin3a,LOC107710005,LOC107750958 other upstream 2927658 21933519 ~ 21933831 (-)

Expression


Co-expression Network