ess2 (dgcr14,LOC107758656,LOC107746196)


Basic Information

Item Value
gene id ess2
gene name dgcr14,LOC107758656,LOC107746196
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 19033060 ~ 19037673 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007254978.3
TTATATCGGGTGTAGTTGAATCGGTTGGTCAGCAGGGGCGCTAGTGAGCATTGACCGGATACACGTAAGGAATGAGCAGCTCAGACCGGAAGTTGCGCGTGAGAGCTccgtttgtttatgtttttggttGGATAGGAAAATCCTGGATTTACCCTCTAACTTATACAATACTTATCATTATACTTACCGCTATAATCACTACTATACTTCAGAGTACCGGGATTAGAGCAGAGCTCCGCCCAGAAGCAGAGAGAAGCTTTATCTCGCGGGTTTAAAGCGAGTTCACCAGGTGTTTCTCAGGTAAAGGTGAGAGATGGAACCCGGATCCGGTGTGGTCAGTTTACCGGCGAACCCGGAGAACAGCGCCGCCGAGAAACCGCGCACCATTCTGCAAGAAGAGCAATACATACAGAATCTGGAAAAGATCATTCAGAGGGATTTTTTCCCAGATGTGTCGAAGCTGCAGGCGCAGAAGGATTACCTGGAGGCAGAGGAGCTCGGAGACCTGGAGCGCATGCGTGAGATCGCCATCAAATATGGCACAGCTATGGCCAAATACACCCCCCGCACATACGTTCCCTATGTAACTCCATCCACGTTTGAGACGCCGGACGCTCGCGCCGCATCACCGTCCACCTCACACACCAAACCCAGAACTTCAGAAAACGGAGGTAAAGATGGTGGTAAGGAGGAGAAGGAGCTCCCGTCCCTGGATCGGTTCTTAGCGAAGAACACAAGTGAGGATAACGCCTCGTTTGAGCAGATCATGGATCTGGCTAAGGATAAAGAGAAGTTGAAGAATGCCTGGCTGTACGAGGCGGAGGAGGAGTTTAAGAAGAGGCACGAGGAGAACCTTGCACTGCCATCGTCGGAGCAGCAGGCGTTGGAGTGTACAAAAGCGGGGGTGGAGACATGGGAATATAAAGCCAGGAACGCTCTGATGTATTACCCCGAGGGTGTAAAGGACGACGCTGTGTTTAAGAAGCCACGGGAGGTTCTGTATAAGAACACTCGGTTTGATGTGGATCCGTTCTGTAAAGCTCTGAATAAATCCCAGATCCAACAGGCTGCTGCTCTAAATGCACAGtttaaGCTGGGGAAAGTTGGTCCAGATGGTAAAGAGCTCCTCCCACACGAGTCTCCCAAAGTGAATGGCTACGGGTTCGAGGGAACGCCGTCACCTGCACCAGGAGTGTCCGAGTCTCCGCTGATGACGTGGGGTGAGATCGAGTCCACTCCATTCCGACTGGACGGATCAGAAACACCAATCATAGAGAGGAGCCATGGCCCATCATTCAAGATTCCTGAGCCCGGGAGGAGAGAGCGTCTGGGTCTGAAGATGGCGAACGAAGTTGCTGCAAAGAACAGAGCCAATAAACAAGAAGCCCTGCGCAAAGTAACAGAGAACCTGGCCAGTTTGACGCCGAAGGGTCTGAGTCCGGCGGCTCTGTCTCCGGCATTGCAGCGTCTGGTCAACCGATCGTCCAGTAAATACACGGATAAAGCTCTGAGGGCCAGTTACACCCCGTCACCTTCACACCGCGGTCTCGGTGCCAAGACGCCACACGGGGGCCCTGCCACACCCTCGGGAACGCCCACGCCCAGCAAGACCAAGACCCCCATCACTCACGACCCAGCGTCCATTACCGATGACCTGCTGCAGCTGCCCAAGCGCCGGAAAGCATCCGACTACTTCTGATCAGAACTGGTGGGGCGGAACCCGGCCGGGTCAGAGACGATAAACGCTGCTGTGAACTGATTGGCCCGACTGTCCGAACATTTAATGACTGATTTAAAGCAGACATTCATAAATCCATCTTAAATATACTGTTACATCTACAGCA
>XM_022681188.1
TTATATCGGGTGTAGTTGAATCGGTTGGTCAGCAGGGGCGCTAGTGAGCATTGACCGGATACACGTAAGGAATGAGCAGCTCAGACCGGAAGTTGCGCGTGAGAGCTccgtttgtttatgtttttggttGGATAGGAAAATCCTGGATTTACCCTCTAACTTATACAATACTTATCATTATACTTACCGCTATAATCACTACTATACTTCAGAGTACCGGGATTAGAGCAGAGCTCCGCCCAGAAGCAGAGAGAAGCTTTATCTCGCGGGTTTAAAGCGAGTTCACCAGGTGTTTCTCAGGTAAAGGTGAGAGATGGAACCCGGATCCGGTGTGGTCAGTTTACCGGCGAACCCGGAGAACAGCGCCGCCGAGAAACCGCGCACCATTCTGCAAGAAGAGCAATACATACAGAATCTGGAAAAGATCATTCAGAGGGATTTTTTCCCAGATGTGTCGAAGCTGCAGGCGCAGAAGGATTACCTGGAGGCAGAGGAGCTCGGAGACCTGGAGCGCATGCGTGAGATCGCCATCAAATATGGCACAGCTATGGCCAAATACACCCCCCGCACATACGTTCCCTATGTAACTCCATCCACGTTTGAGACGCCGGACGCTCGCGCCGCATCACCGTCCACCTCACACACCAAACCCAGAACTTCAGAAAACGGAGGTAAAGATGGTGGTAAGGAGGAGAAGGAGCTCCCGTCCCTGGATCGGTTCTTAGCGAAGAACACAAGTGAGGATAACGCCTCGTTTGAGCAGATCATGGATCTGGCTAAGGATAAAGAGAAGTTGAAGAATGCCTGGCTGTACGAGGCGGAGGAGGAGTTTAAGAAGAGGCACGAGGAGAACCTTGCACTGCCATCGTCGGAGCAGCAGGCGTTGGAGTGTACAAAAGCGGGGGTGGAGACATGGGAATATAAAGCCAGGAACGCTCTGATGTATTACCCCGAGGGTGTAAAGGACGACGCTGTGTTTAAGAAGCCACGGGAGGTTCTGTATAAGAACACTCGGTTTGATGTGGATCCGTTCTGTAAAGCTCTGAATAAATCCCAGATCCAACAGGCTGCTGCTCTAAATGCACAGtttaaGCTGGGGAAAGTTGGTCCAGATGGTAAAGAGCTCCTCCCACACGAGTCTCCCAAAGTGAATGGCTACGGGTTCGAGGGAACGCCGTCACCTGCACCAGGTGGTTCTGTAGGAGTGTCCGAGTCTCCGCTGATGACGTGGGGTGAGATCGAGTCCACTCCATTCCGACTGGACGGATCAGAAACACCAATCATAGAGAGGAGCCATGGCCCATCATTCAAGATTCCTGAGCCCGGGAGGAGAGAGCGTCTGGGTCTGAAGATGGCGAACGAAGTTGCTGCAAAGAACAGAGCCAATAAACAAGAAGCCCTGCGCAAAGTAACAGAGAACCTGGCCAGTTTGACGCCGAAGGGTCTGAGTCCGGCGGCTCTGTCTCCGGCATTGCAGCGTCTGGTCAACCGATCGTCCAGTAAATACACGGATAAAGCTCTGAGGGCCAGTTACACCCCGTCACCTTCACACCGCGGTCTCGGTGCCAAGACGCCACACGGGGGCCCTGCCACACCCTCGGGAACGCCCACGCCCAGCAAGACCAAGACCCCCATCACTCACGACCCAGCGTCCATTACCGATGACCTGCTGCAGCTGCCCAAGCGCCGGAAAGCATCCGACTACTTCTGATCAGAACTGGTGGGGCGGAACCCGGCCGGGTCAGAGACGATAAACGCTGCTGTGAACTGATTGGCCCGACTGTCCGAACATTTAATGACTGATTTAAAGCAGACATTCATAAATCCATCTTAAATATACTGTTACATCTACAGCA

Function

symbol description
dgcr14 protein DGCR14

NR:

description
PREDICTED: protein DGCR14

GO: NA

KEGG:

id description
K13118 DGCR14; protein DGCR14

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007254978.3 False 1844 mRNA 0.53 10 19033060 19037673
XM_022681188.1 True 1856 mRNA 0.53 10 19033060 19037673

Neighbor

gene id symbol gene type direction distance location
LOC103046910 NA coding upstream 2260 19010873 ~ 19030800 (+)
LOC103046599 NA coding upstream 48776 18956694 ~ 18984284 (+)
LOC103046295 prlhr2b,LOC108440160,LOC107746212,LOC107558127,LOC107583448,LOC107689875,LOC107758612 coding upstream 192636 18835816 ~ 18840424 (+)
LOC103028061 NA coding upstream 203818 18817912 ~ 18829242 (+)
anxa4 anxa4,LOC107746213 coding upstream 226509 18792369 ~ 18806551 (+)
LOC103031227 orai1b,LOC103031227,LOC108425168,LOC107746203,LOC108276842,LOC107602056,LOC107689140,LOC107758661 coding downstream 11254 19048927 ~ 19052826 (+)
tmem120b tmem120b,LOC103032067,LOC107689172,LOC107758658,LOC107658534,LOC107746200 coding downstream 19358 19057031 ~ 19062255 (+)
setd1b LOC108425171,LOC107689149,LOC107658592,LOC107746221,LOC107558115 coding downstream 42115 19079788 ~ 19099415 (+)
LOC103034500 NA coding downstream 96438 19134111 ~ 19137723 (+)
LOC103033969 NA coding downstream 112736 19150409 ~ 19157103 (+)
G177392 NA non-coding upstream 16340 19015385 ~ 19016720 (+)
G177349 NA non-coding upstream 185755 18845695 ~ 18847305 (+)
G177324 NA non-coding upstream 331371 18700992 ~ 18701689 (+)
G177314 bmp1,LOC108440159 non-coding upstream 381521 18648763 ~ 18651539 (+)
G177300 NA non-coding upstream 384957 18645627 ~ 18648103 (+)
G177397 NA non-coding downstream 3462 19041135 ~ 19042186 (+)
G177401 NA non-coding downstream 6034 19043707 ~ 19045097 (+)
G177402 LOC108425167,LOC105014887 non-coding downstream 7507 19045180 ~ 19046232 (+)
G177414 NA non-coding downstream 10344 19048017 ~ 19048370 (+)
G177411 NA non-coding downstream 37694 19075367 ~ 19078352 (+)
LOC103024155 si:dkey-81j8.6,LOC108440140,LOC107720718,LOC107572716,LOC107678005,LOC105904646 other upstream 474616 18539898 ~ 18558444 (+)
LOC103047412 golga7,LOC108276767,LOC107553707,LOC107687624,LOC107678053,LOC107586122 other upstream 702571 18324873 ~ 18330489 (+)
G177219 NA other upstream 806927 18224273 ~ 18226133 (+)
xpo7 xpo7,LOC107678024,LOC107586117 other upstream 858542 18138712 ~ 18174518 (+)
G176882 inpp5j other upstream 1986071 17042835 ~ 17046989 (+)
LOC111194983 NA other downstream 682628 19720301 ~ 19722560 (+)
LOC103042206 LOC108428882 other downstream 713269 19750942 ~ 19775791 (+)
LOC103043854 NA other downstream 1051565 20089238 ~ 20096711 (+)
G177950 NA other downstream 1101149 20138822 ~ 20139564 (+)
ier3ip1 ier3ip1,LOC106633120 other downstream 1358704 20396377 ~ 20399165 (+)

Expression


Co-expression Network