lin54 (lin54,LOC107744261)


Basic Information

Item Value
gene id lin54
gene name lin54,LOC107744261
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 19219834 ~ 19235608 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007255003.3
tTTACCTCCACGATAATCCCACTAAAAACCCaccaaaactaaccaaatcCCACCCAAAACGCACCAAGCCGCTCCGCTGTTGTTTTTCTCGCGTCTGGAAATGAACTGATGACGAGTTGAAAATGGCGGATCTTTCGAAATCCAACCCGGGCCTGAAATAGAAACACAGCCCCGCTGCCCGCTTTCCGCAGGGCTCTTCATCACCACACCTCGCCCTGTTCAGCCTGGATATGTGTACTTTTATATCGACTAATGATTATTCAGAGAATGCAGAGTAATGTCGCGATTTATGTCATTTAAACAGGAGCAGCGCTGCTGAAAAACATTAACGCTAGCTGCCTGACTCGCCTTTCTGACCAGCACTCACATTCACAGAGAGAGGAGTGACTGAGTGCGTGTGAAAGGATGGACGTGGTGTCGCCCGATCTGAACAGTATCCTCCCTGATGAGATCATGGACACTGAGGCCATTGCCATGGAGGAGGATCCTCCCAATGAACCTCCTGCACCATCCGTGCAGTCAGAACCAGAGCCAGCTCAGGTTCCAATGGAAATAGAGGTGTCTGAAATTGTCAGCTTGTGTCCTGCTACCGCTCCAACACAGAAGACGCAAGCTCTGACCACATCCACCACCACGGACTCCACTTTATGCAGCATCAGCTCTGGAACGCAGCTTATTGTAACCTCTGCTTCCTCTGCTGGCCTTAAGCCTGTCGCTTCCTCCACCACTCAGTCCAGCAGTGCTGTAGTGGGCCAGGGCCTTCCCAAACTCTCGGCCCCTTTGACGCTCCCAGCCAACCACCAGCTGATTCTCAGCAAagtggctgctgatggcaagtcTCCAGGCACCACTGTCCTCAAGCAGGAAGGCCAGAAACTGTTGGTCACTGGACTCAGTAAATCTGGGCAGCCCCTCGTGCTGGCGCTGCCTCACACGTGGAGCAAGCCCGCCACGTCTCAGGGCACGGGGGACGGCAAAGCTCAACCCACGCAGTTTAAAGTGGTGACAACAGGGGCGAAGCCTGTCATTGGGGTGCAGGCTGTGACATCGACCAGCCAGCTTCTGGGGTCTTCAACGTCTCTGCAAGCACAGCAGCTCAAGACTGttcagataacaaaaaagacacCAGTCTCCACAGCAGGGCCCATGATAACTAAGCTGATCATCACAAAGGCCTTAAACAGCAAGGGTCTGACAGGTCAGGCTGCAGTGCAGGCTCCCATGGTCCCAGGGAGGGTGCTTTCACAAACCACGCCATTGACTCCTCCACGGAGCATTGCTGTCGGGGAAGCAGTCAGCACACCACAGAACATCTCCAGCAGCAGCAAAGTCGCCATATCTCCCCTCAAATCTCCCAGCAAGCTGACGGTGGTTTCAGTGGCCAGCCAGCCTCCAAACTCTCCTCAGAAATCCATGACACTGCCTATAAATGTGGCTCTTGGCCAGCAGATCCTCACTGTGCAGCAGACTTCAACAACCTCCCCAGTTAAAGCAGGAACCAGCCAGTCCACTGCCCAGGCAGTAAAGCCAGTGCAGACAGTGGCGATAGGTGGCACGCctcaatttaaaacaatcatCCCCCTGGCCACACCCCCCAACGTTCAGCAGATACAGGTGCCCGGCAGCCGCTTCCACTACGTGCGCCTGGTCACAGCTACAACGGGGGGCAGCACCCAACACACCGCCAGTCCCAGCACTAACACCAACCCTTCCATCCAGCCAGgTAAGCCCATGATGATGAACACTGCTGCTGTGAGGATGTCTGTTCCCATAGTCCCAGCACAGACCGTCAAACAGGTGGTTCCAAAGCCCATGACCTCAGCAGCCCAGGTGGTGACCACCAGCCAGACGCAGCAGCGACTCATCATGCCAGCCACCCCACTGCCTCAAATTCAGCCCAACCTGACCAACCTGCCCCCGGGCACCGTGCTCGCCCCTGCCCCTGGTGCTGGAAACATGGGCTACGCTGTGCTGCCAGCTCAATATGTTAcacagATTCCACAATCGGCATTTGTGACTTTGGCCAGCAGTTCTGGTTTCTCCGCCCCAACCTCCATTCAGACCCAAGCCAGGCTTCCTCTCAACGGTTTATCAGCACCAGATACAACCTCAAGACCACGAAAGCCTTGCAACTGCACAAAGTCACAGTGCTTGAAACTGTATTGTGACTGCTTTGCGAATGGGGAGTTTTGTAATAACTGCAACTGCGTAAATTGCTTCAACAACCTCGACCATGAGAGTGAACGACTCAAAGCAATTAAGGCTTGCTTGGACAGAAACCCAGTAGCCTTTAAACCCAAAATTGGCAAAGGAAAAGAGGGAGAATCAGACAGACGGCACAGCAAAGGCTGCAACTGCAAGAAGTCTGGCTGTCTGAAGAATTATTGCGAGTGCTATGAGGCAAAGATCATGTGCTCGTCAATCTGTAAGTGTGTGGGCTGTAAGAACTTTGAGGAGAGTCCAGAGAGGAAGACGCTGATGCATTTGGCCGATGCTGCAGAAGTGCGGGTGCAGCAGCAGACAGCAGCTAAGACTAAGCTGTCCTCTCAGATATCAGACCTGCTCACGAGAACTACACCAGCTATCACCAGCGGAGGGGGGAAATTGCCATACACATTCGTAACAAAGGAAGTAGCGGAGGCGACATGCGACTGCTTGCTGGAGCAGGCCGAGAAAGCTGAGCTGACCAACCAATCACAAGTCCTGGCTGAGAGGCTCATCCTGGAGGAGTTTGGACGATGTCTGCGCAGAATCATCAGCTTTGCCAGCAAAGCCAAGACGGACTGCTCTATCAACTGCTaggactgactgactgactgaacaaCTGACCTGCCAGACACAGCTGCACTGCACTGGGATATGCTGGGCCGGGCCAAACCAAGGCTTCAGCTATTATTTAGTCCTTGGCTGACTGGCCCCGGATCAGAGCTTGGCCGAACTCCTTATGCTCCCCACCAGCCACAGAGTTTCCAGAGTTTCCTGGATGTATTTCCTGCTTCTTGACTCACATAAAAAAGCTAAGTAGGCCTGCTGCAGATTTTTAGGGGCTTCTTGGTTGATCCTACATCGGGATCAGTGGATGCAGGGATTGGATGGGCTGTATTGGATGCAGAGAAAGACTTTGGGTGGTTTACAGAGGACTCATCTGAGAAGTTTTGGGCAGAGAGGAGCTAAACActgtacagcagcagcagagaggaggaggaggagaagaggactGCATAGGGGTTGGCCACGCCATCCATCTGCCTCTCCTGCATCACAGTAGCCTTTGTGTGTGGGCTTGCACAGTTCGCTAATTTGGAGGAGATTTTTAGggttttgtttttcctttttgtttgtttgttttaaacctGCAATCATGCCATTTCATACTCTActcttttaaaataagactttcaTTCATACTAAtcagttcttgtttttttatttttcatttcctggtctgttttctttctttcatttttaccGCCAATAACCTCAGATGATCAATAATCATGATTTGTTATACAGTAAGTAGCCTATACTGTAGCctcttattatattatgttcttgatatttatttgctgttttcctGGCCTGCAGAAACTCCCCAAAGAAGctgactgtgtctgagtccaaGCATCACACAGTAGTTTCTAGCTTGGTTGCATTAACAGGTTCCTGTTGGTGTGATGAAAGGGTACGCCATTAATTCACAATTTCTGTATTTGACCTAATAGAAGTTGtggtgttattttttgttaagcaCAGGTTTGGCACGCTGGGTCTACCCTTAGTTTTCAGTGGAAGATATTACTGCATCCTGTGATATAAGCAGGCCATGATAACTAACTGTTTGTTTGGAGATTATGGTGTCCCAAACATAATTATGATAAATGATATTGTAATTTTGAGACCATATTattccattcatttaatgaaaatgaaaaatattaattattaaaaatatttagaaattgGGGTtggaatataatattttaaatattctaagaatacatatatacatcaataaaataatgtcTCTGTTGCTCATTCACATTAATGGGCTCTCCTTCCTAAGAATAACATGTTCGACGATAATAAGGTCAGCAAAATTGATTAAGGTCATGCTCCTTTTTTGTATGATATTTTGATAAAGTAATGATAATGACAGGCCTGTTGTGGTTGTGGTAATTCTGTTCTGTTTAGAGTATATGCTTCTCATTTTCATTTAACATCTGAACTAAATCTTCTGGTTTGAGGATGTTTATGGGtcaaaatactaatgttgctaaATGTAATCTAATTCTAAATATAGTCTAAatctagtcttggactacaaaTTCTGAATgcagattttccattgaaagtaaaTGCAGTCTACAACTAGGCTTAAGCCCTATTTGGGGAAACATCCTAATTGGAttggtttcccagacagggattaagcctagatGTAGACTCCATTTTCGTTTAAAGAGAAAGCTGCATTCAGAAATTGTAGTCCAAGTCTAGACTTAATCCCTCTTGAGGAAACCAGTCCATATGCCAATCTGAAACTGAAGGTTAATCCCAGAGTGCCAAAAACAGTCATTACAAGCACTGCAGAATAACACACAACTTCAGGGGACTGTCTGATCACTCTGTAAGTCTTCTTCTTTTAATGTCAGAAAATGGTGCTTTTTAGTCCCAGCTACACCcccccaaaacaaacacacacacactcacaccctgCACTACACATTTTGGTGGGTTTACCTGTTTTGGTCATCTAATGCTTTTCCTGTTTAAAAACCTGCAGGGCTTGGGCATTAGTTGAGAAGGTGGAAATCTACACTGCATACAGAATTACCAGAATACAGTGCTGACAGAGCAGAATATCCTCCACACTGTAAAGACCAGGAGCATCAAACATGACCAAACTGTTAAACAAGA
>XM_007255004.3
AGGCGGAGCCTCATTATGGGATGTTAGGGGTGAAATGGCGCTCGGCGCGGTATTTTAAACAATCGGATCTGTTTCGGGAAACGTAGCGAGAGAAAAGCGGTGCGGGGCCCAGCTGTACCGGACCGGACTGGGCCGTGCACGAACACGGCGACAAGCGTCCACATTCCCGAGGAAGCGACCGTAATAGAACTTGACTGAGTGCGTGTGAAAGGATGGACGTGGTGTCGCCCGATCTGAACAGTATCCTCCCTGATGAGATCATGGACACTGAGGCCATTGCCATGGAGGAGGATCCTCCCAATGAACCTCCTGCACCATCCGTGCAGTCAGAACCAGAGCCAGCTCAGGTTCCAATGGAAATAGAGGTGTCTGAAATTGTCAGCTTGTGTCCTGCTACCGCTCCAACACAGAAGACGCAAGCTCTGACCACATCCACCACCACGGACTCCACTTTATGCAGCATCAGCTCTGGAACGCAGCTTATTGTAACCTCTGCTTCCTCTGCTGGCCTTAAGCCTGTCGCTTCCTCCACCACTCAGTCCAGCAGTGCTGTAGTGGGCCAGGGCCTTCCCAAACTCTCGGCCCCTTTGACGCTCCCAGCCAACCACCAGCTGATTCTCAGCAAagtggctgctgatggcaagtcTCCAGGCACCACTGTCCTCAAGCAGGAAGGCCAGAAACTGTTGGTCACTGGACTCAGTAAATCTGGGCAGCCCCTCGTGCTGGCGCTGCCTCACACGTGGAGCAAGCCCGCCACGTCTCAGGGCACGGGGGACGGCAAAGCTCAACCCACGCAGTTTAAAGTGGTGACAACAGGGGCGAAGCCTGTCATTGGGGTGCAGGCTGTGACATCGACCAGCCAGCTTCTGGGGTCTTCAACGTCTCTGCAAGCACAGCAGCTCAAGACTGttcagataacaaaaaagacacCAGTCTCCACAGCAGGGCCCATGATAACTAAGCTGATCATCACAAAGGCCTTAAACAGCAAGGGTCTGACAGGTCAGGCTGCAGTGCAGGCTCCCATGGTCCCAGGGAGGGTGCTTTCACAAACCACGCCATTGACTCCTCCACGGAGCATTGCTGTCGGGGAAGCAGTCAGCACACCACAGAACATCTCCAGCAGCAGCAAAGTCGCCATATCTCCCCTCAAATCTCCCAGCAAGCTGACGGTGGTTTCAGTGGCCAGCCAGCCTCCAAACTCTCCTCAGAAATCCATGACACTGCCTATAAATGTGGCTCTTGGCCAGCAGATCCTCACTGTGCAGCAGACTTCAACAACCTCCCCAGTTAAAGCAGGAACCAGCCAGTCCACTGCCCAGGCAGTAAAGCCAGTGCAGACAGTGGCGATAGGTGGCACGCctcaatttaaaacaatcatCCCCCTGGCCACACCCCCCAACGTTCAGCAGATACAGGTGCCCGGCAGCCGCTTCCACTACGTGCGCCTGGTCACAGCTACAACGGGGGGCAGCACCCAACACACCGCCAGTCCCAGCACTAACACCAACCCTTCCATCCAGCCAGgTAAGCCCATGATGATGAACACTGCTGCTGTGAGGATGTCTGTTCCCATAGTCCCAGCACAGACCGTCAAACAGGTGGTTCCAAAGCCCATGACCTCAGCAGCCCAGGTGGTGACCACCAGCCAGACGCAGCAGCGACTCATCATGCCAGCCACCCCACTGCCTCAAATTCAGCCCAACCTGACCAACCTGCCCCCGGGCACCGTGCTCGCCCCTGCCCCTGGTGCTGGAAACATGGGCTACGCTGTGCTGCCAGCTCAATATGTTAcacagATTCCACAATCGGCATTTGTGACTTTGGCCAGCAGTTCTGGTTTCTCCGCCCCAACCTCCATTCAGACCCAAGCCAGGCTTCCTCTCAACGGTTTATCAGCACCAGATACAACCTCAAGACCACGAAAGCCTTGCAACTGCACAAAGTCACAGTGCTTGAAACTGTATTGTGACTGCTTTGCGAATGGGGAGTTTTGTAATAACTGCAACTGCGTAAATTGCTTCAACAACCTCGACCATGAGAGTGAACGACTCAAAGCAATTAAGGCTTGCTTGGACAGAAACCCAGTAGCCTTTAAACCCAAAATTGGCAAAGGAAAAGAGGGAGAATCAGACAGACGGCACAGCAAAGGCTGCAACTGCAAGAAGTCTGGCTGTCTGAAGAATTATTGCGAGTGCTATGAGGCAAAGATCATGTGCTCGTCAATCTGTAAGTGTGTGGGCTGTAAGAACTTTGAGGAGAGTCCAGAGAGGAAGACGCTGATGCATTTGGCCGATGCTGCAGAAGTGCGGGTGCAGCAGCAGACAGCAGCTAAGACTAAGCTGTCCTCTCAGATATCAGACCTGCTCACGAGAACTACACCAGCTATCACCAGCGGAGGGGGGAAATTGCCATACACATTCGTAACAAAGGAAGTAGCGGAGGCGACATGCGACTGCTTGCTGGAGCAGGCCGAGAAAGCTGAGCTGACCAACCAATCACAAGTCCTGGCTGAGAGGCTCATCCTGGAGGAGTTTGGACGATGTCTGCGCAGAATCATCAGCTTTGCCAGCAAAGCCAAGACGGACTGCTCTATCAACTGCTaggactgactgactgactgaacaaCTGACCTGCCAGACACAGCTGCACTGCACTGGGATATGCTGGGCCGGGCCAAACCAAGGCTTCAGCTATTATTTAGTCCTTGGCTGACTGGCCCCGGATCAGAGCTTGGCCGAACTCCTTATGCTCCCCACCAGCCACAGAGTTTCCAGAGTTTCCTGGATGTATTTCCTGCTTCTTGACTCACATAAAAAAGCTAAGTAGGCCTGCTGCAGATTTTTAGGGGCTTCTTGGTTGATCCTACATCGGGATCAGTGGATGCAGGGATTGGATGGGCTGTATTGGATGCAGAGAAAGACTTTGGGTGGTTTACAGAGGACTCATCTGAGAAGTTTTGGGCAGAGAGGAGCTAAACActgtacagcagcagcagagaggaggaggaggagaagaggactGCATAGGGGTTGGCCACGCCATCCATCTGCCTCTCCTGCATCACAGTAGCCTTTGTGTGTGGGCTTGCACAGTTCGCTAATTTGGAGGAGATTTTTAGggttttgtttttcctttttgtttgtttgttttaaacctGCAATCATGCCATTTCATACTCTActcttttaaaataagactttcaTTCATACTAAtcagttcttgtttttttatttttcatttcctggtctgttttctttctttcatttttaccGCCAATAACCTCAGATGATCAATAATCATGATTTGTTATACAGTAAGTAGCCTATACTGTAGCctcttattatattatgttcttgatatttatttgctgttttcctGGCCTGCAGAAACTCCCCAAAGAAGctgactgtgtctgagtccaaGCATCACACAGTAGTTTCTAGCTTGGTTGCATTAACAGGTTCCTGTTGGTGTGATGAAAGGGTACGCCATTAATTCACAATTTCTGTATTTGACCTAATAGAAGTTGtggtgttattttttgttaagcaCAGGTTTGGCACGCTGGGTCTACCCTTAGTTTTCAGTGGAAGATATTACTGCATCCTGTGATATAAGCAGGCCATGATAACTAACTGTTTGTTTGGAGATTATGGTGTCCCAAACATAATTATGATAAATGATATTGTAATTTTGAGACCATATTattccattcatttaatgaaaatgaaaaatattaattattaaaaatatttagaaattgGGGTtggaatataatattttaaatattctaagaatacatatatacatcaataaaataatgtcTCTGTTGCTCATTCACATTAATGGGCTCTCCTTCCTAAGAATAACATGTTCGACGATAATAAGGTCAGCAAAATTGATTAAGGTCATGCTCCTTTTTTGTATGATATTTTGATAAAGTAATGATAATGACAGGCCTGTTGTGGTTGTGGTAATTCTGTTCTGTTTAGAGTATATGCTTCTCATTTTCATTTAACATCTGAACTAAATCTTCTGGTTTGAGGATGTTTATGGGtcaaaatactaatgttgctaaATGTAATCTAATTCTAAATATAGTCTAAatctagtcttggactacaaaTTCTGAATgcagattttccattgaaagtaaaTGCAGTCTACAACTAGGCTTAAGCCCTATTTGGGGAAACATCCTAATTGGAttggtttcccagacagggattaagcctagatGTAGACTCCATTTTCGTTTAAAGAGAAAGCTGCATTCAGAAATTGTAGTCCAAGTCTAGACTTAATCCCTCTTGAGGAAACCAGTCCATATGCCAATCTGAAACTGAAGGTTAATCCCAGAGTGCCAAAAACAGTCATTACAAGCACTGCAGAATAACACACAACTTCAGGGGACTGTCTGATCACTCTGTAAGTCTTCTTCTTTTAATGTCAGAAAATGGTGCTTTTTAGTCCCAGCTACACCcccccaaaacaaacacacacacactcacaccctgCACTACACATTTTGGTGGGTTTACCTGTTTTGGTCATCTAATGCTTTTCCTGTTTAAAAACCTGCAGGGCTTGGGCATTAGTTGAGAAGGTGGAAATCTACACTGCATACAGAATTACCAGAATACAGTGCTGACAGAGCAGAATATCCTCCACACTGTAAAGACCAGGAGCATCAAACATGACCAAACTGTTAAACAAGA
>XM_007255005.3
AGGCGGAGCCTCATTATGGGATGTTAGGGGTGAAATGGCGCTCGGCGCGGTATTTTAAACAATCGGATCTGTTTCGGGAAACGTAGCGAGAGAAAAGCGGTGCGGGGCCCAGCTGTACCGGACCGGACTGGGCCGTGCACGAACACGGCGACAAGCGTCCACATTCCCGAGGAAGCGACCGTAATAGAACTGAGCAGCGCTGCTGAAAAACATTAACGCTAGCTGCCTGACTCGCCTTTCTGACCAGCACTCACATTCACAGAGAGAGGAGTGACTGAGTGCGTGTGAAAGGATGGACGTGGTGTCGCCCGATCTGAACAGTATCCTCCCTGATGAGATCATGGACACTGAGGCCATTGCCATGGAGGAGGATCCTCCCAATGAACCTCCTGCACCATCCGTGCAGTCAGAACCAGAGCCAGCTCAGGTTCCAATGGAAATAGAGGTGTCTGAAATTGTCAGCTTGTGTCCTGCTACCGCTCCAACACAGAAGACGCAAGCTCTGACCACATCCACCACCACGGACTCCACTTTATGCAGCATCAGCTCTGGAACGCAGCTTATTGTAACCTCTGCTTCCTCTGCTGGCCTTAAGCCTGTCGCTTCCTCCACCACTCAGTCCAGCAGTGCTGTAGTGGGCCAGGGCCTTCCCAAACTCTCGGCCCCTTTGACGCTCCCAGCCAACCACCAGCTGATTCTCAGCAAagtggctgctgatggcaagtcTCCAGGCACCACTGTCCTCAAGCAGGAAGGCCAGAAACTGTTGGTCACTGGACTCAGTAAATCTGGGCAGCCCCTCGTGCTGGCGCTGCCTCACACGTGGAGCAAGCCCGCCACGTCTCAGGGCACGGGGGACGGCAAAGCTCAACCCACGCAGTTTAAAGTGGTGACAACAGGGGCGAAGCCTGTCATTGGGGTGCAGGCTGTGACATCGACCAGCCAGCTTCTGGGGTCTTCAACGTCTCTGCAAGCACAGCAGCTCAAGACTGttcagataacaaaaaagacacCAGTCTCCACAGCAGGGCCCATGATAACTAAGCTGATCATCACAAAGGCCTTAAACAGCAAGGGTCTGACAGGTCAGGCTGCAGTGCAGGCTCCCATGGTCCCAGGGAGGGTGCTTTCACAAACCACGCCATTGACTCCTCCACGGAGCATTGCTGTCGGGGAAGCAGTCAGCACACCACAGAACATCTCCAGCAGCAGCAAAGTCGCCATATCTCCCCTCAAATCTCCCAGCAAGCTGACGGTGGTTTCAGTGGCCAGCCAGCCTCCAAACTCTCCTCAGAAATCCATGACACTGCCTATAAATGTGGCTCTTGGCCAGCAGATCCTCACTGTGCAGCAGACTTCAACAACCTCCCCAGTTAAAGCAGGAACCAGCCAGTCCACTGCCCAGGCAGTAAAGCCAGTGCAGACAGTGGCGATAGGTGGCACGCctcaatttaaaacaatcatCCCCCTGGCCACACCCCCCAACGTTCAGCAGATACAGGTGCCCGGCAGCCGCTTCCACTACGTGCGCCTGGTCACAGCTACAACGGGGGGCAGCACCCAACACACCGCCAGTCCCAGCACTAACACCAACCCTTCCATCCAGCCAGgTAAGCCCATGATGATGAACACTGCTGCTGTGAGGATGTCTGTTCCCATAGTCCCAGCACAGACCGTCAAACAGGTGGTTCCAAAGCCCATGACCTCAGCAGCCCAGGTGGTGACCACCAGCCAGACGCAGCAGCGACTCATCATGCCAGCCACCCCACTGCCTCAAATTCAGCCCAACCTGACCAACCTGCCCCCGGGCACCGTGCTCGCCCCTGCCCCTGGTGCTGGAAACATGGGCTACGCTGTGCTGCCAGCTCAATATGTTAcacagATTCCACAATCGGCATTTGTGACTTTGGCCAGCAGTTCTGGTTTCTCCGCCCCAACCTCCATTCAGACCCAAGCCAGGCTTCCTCTCAACGGTTTATCAGCACCAGATACAACCTCAAGACCACGAAAGCCTTGCAACTGCACAAAGTCACAGTGCTTGAAACTGTATTGTGACTGCTTTGCGAATGGGGAGTTTTGTAATAACTGCAACTGCGTAAATTGCTTCAACAACCTCGACCATGAGAGTGAACGACTCAAAGCAATTAAGGCTTGCTTGGACAGAAACCCAGTAGCCTTTAAACCCAAAATTGGCAAAGGAAAAGAGGGAGAATCAGACAGACGGCACAGCAAAGGCTGCAACTGCAAGAAGTCTGGCTGTCTGAAGAATTATTGCGAGTGCTATGAGGCAAAGATCATGTGCTCGTCAATCTGTAAGTGTGTGGGCTGTAAGAACTTTGAGGAGAGTCCAGAGAGGAAGACGCTGATGCATTTGGCCGATGCTGCAGAAGTGCGGGTGCAGCAGCAGACAGCAGCTAAGACTAAGCTGTCCTCTCAGATATCAGACCTGCTCACGAGAACTACACCAGCTATCACCAGCGGAGGGGGGAAATTGCCATACACATTCGTAACAAAGGAAGTAGCGGAGGCGACATGCGACTGCTTGCTGGAGCAGGCCGAGAAAGCTGAGCTGACCAACCAATCACAAGTCCTGGCTGAGAGGCTCATCCTGGAGGAGTTTGGACGATGTCTGCGCAGAATCATCAGCTTTGCCAGCAAAGCCAAGACGGACTGCTCTATCAACTGCTaggactgactgactgactgaacaaCTGACCTGCCAGACACAGCTGCACTGCACTGGGATATGCTGGGCCGGGCCAAACCAAGGCTTCAGCTATTATTTAGTCCTTGGCTGACTGGCCCCGGATCAGAGCTTGGCCGAACTCCTTATGCTCCCCACCAGCCACAGAGTTTCCAGAGTTTCCTGGATGTATTTCCTGCTTCTTGACTCACATAAAAAAGCTAAGTAGGCCTGCTGCAGATTTTTAGGGGCTTCTTGGTTGATCCTACATCGGGATCAGTGGATGCAGGGATTGGATGGGCTGTATTGGATGCAGAGAAAGACTTTGGGTGGTTTACAGAGGACTCATCTGAGAAGTTTTGGGCAGAGAGGAGCTAAACActgtacagcagcagcagagaggaggaggaggagaagaggactGCATAGGGGTTGGCCACGCCATCCATCTGCCTCTCCTGCATCACAGTAGCCTTTGTGTGTGGGCTTGCACAGTTCGCTAATTTGGAGGAGATTTTTAGggttttgtttttcctttttgtttgtttgttttaaacctGCAATCATGCCATTTCATACTCTActcttttaaaataagactttcaTTCATACTAAtcagttcttgtttttttatttttcatttcctggtctgttttctttctttcatttttaccGCCAATAACCTCAGATGATCAATAATCATGATTTGTTATACAGTAAGTAGCCTATACTGTAGCctcttattatattatgttcttgatatttatttgctgttttcctGGCCTGCAGAAACTCCCCAAAGAAGctgactgtgtctgagtccaaGCATCACACAGTAGTTTCTAGCTTGGTTGCATTAACAGGTTCCTGTTGGTGTGATGAAAGGGTACGCCATTAATTCACAATTTCTGTATTTGACCTAATAGAAGTTGtggtgttattttttgttaagcaCAGGTTTGGCACGCTGGGTCTACCCTTAGTTTTCAGTGGAAGATATTACTGCATCCTGTGATATAAGCAGGCCATGATAACTAACTGTTTGTTTGGAGATTATGGTGTCCCAAACATAATTATGATAAATGATATTGTAATTTTGAGACCATATTattccattcatttaatgaaaatgaaaaatattaattattaaaaatatttagaaattgGGGTtggaatataatattttaaatattctaagaatacatatatacatcaataaaataatgtcTCTGTTGCTCATTCACATTAATGGGCTCTCCTTCCTAAGAATAACATGTTCGACGATAATAAGGTCAGCAAAATTGATTAAGGTCATGCTCCTTTTTTGTATGATATTTTGATAAAGTAATGATAATGACAGGCCTGTTGTGGTTGTGGTAATTCTGTTCTGTTTAGAGTATATGCTTCTCATTTTCATTTAACATCTGAACTAAATCTTCTGGTTTGAGGATGTTTATGGGtcaaaatactaatgttgctaaATGTAATCTAATTCTAAATATAGTCTAAatctagtcttggactacaaaTTCTGAATgcagattttccattgaaagtaaaTGCAGTCTACAACTAGGCTTAAGCCCTATTTGGGGAAACATCCTAATTGGAttggtttcccagacagggattaagcctagatGTAGACTCCATTTTCGTTTAAAGAGAAAGCTGCATTCAGAAATTGTAGTCCAAGTCTAGACTTAATCCCTCTTGAGGAAACCAGTCCATATGCCAATCTGAAACTGAAGGTTAATCCCAGAGTGCCAAAAACAGTCATTACAAGCACTGCAGAATAACACACAACTTCAGGGGACTGTCTGATCACTCTGTAAGTCTTCTTCTTTTAATGTCAGAAAATGGTGCTTTTTAGTCCCAGCTACACCcccccaaaacaaacacacacacactcacaccctgCACTACACATTTTGGTGGGTTTACCTGTTTTGGTCATCTAATGCTTTTCCTGTTTAAAAACCTGCAGGGCTTGGGCATTAGTTGAGAAGGTGGAAATCTACACTGCATACAGAATTACCAGAATACAGTGCTGACAGAGCAGAATATCCTCCACACTGTAAAGACCAGGAGCATCAAACATGACCAAACTGTTAAACAAGA

Function

symbol description
lin54 Predicted to enable DNA binding activity and metal ion binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to be active in nucleus. Orthologous to human LIN54 (lin-54 DREAM MuvB core complex component).

NR:

description
PREDICTED: protein lin-54 homolog

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0007049 cell cycle biological_process
GO:0005634 nucleus cellular_component
GO:0003677 DNA binding molecular_function

KEGG:

id description
K21776 LIN54; protein lin-54

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007255003.3 True 4917 mRNA 0.47 14 19219834 19233619
XM_007255004.3 False 4724 mRNA 0.48 14 19219834 19235608
XM_007255005.3 False 4804 mRNA 0.48 15 19219834 19235608

Neighbor

gene id symbol gene type direction distance location
inip inip,LOC107658659,LOC107558675,LOC107571239 coding downstream 6456 19210880 ~ 19213378 (-)
LOC103047514 NA coding downstream 34165 19182249 ~ 19185669 (-)
LOC103036397 march5l,LOC103036397,LOC108425180,LOC107689266,LOC107718703,LOC107602066,LOC107588990 coding downstream 57327 19158102 ~ 19162507 (-)
dusp11 NA coding downstream 86456 19129207 ~ 19133378 (-)
dgcr2 dgcr2 coding downstream 98177 19112034 ~ 19121657 (-)
plac8 plac8 coding upstream 10394 19246002 ~ 19249795 (-)
srek1ip1 srek1ip1,LOC107658680,LOC107744254,LOC107685105,LOC107713259 coding upstream 20481 19256089 ~ 19259917 (-)
adamts6 adamts6,LOC107685101,LOC107713302,LOC107744255 coding upstream 122514 19358122 ~ 19430590 (-)
trim23 trim23,LOC107658681 coding upstream 214137 19449745 ~ 19458441 (-)
sgtb sgtb,LOC107667268,LOC107558703,LOC107548671,LOC107705058 coding upstream 240720 19476328 ~ 19507826 (-)
G177734 NA non-coding downstream 439 19217115 ~ 19219395 (-)
G177735 NA non-coding downstream 3724 19214306 ~ 19216110 (-)
G177742 kiaa1958 non-coding downstream 17102 19200549 ~ 19202732 (-)
G177729 acty,LOC103036907,LOC108425179,LOC107658603,LOC106563059,LOC107588989 non-coding downstream 51305 19166090 ~ 19168529 (-)
G177728 actr1b,actr1,LOC108425179,LOC103036907,LOC107588989,LOC107658603,LOC107602067,LOC106563059 non-coding downstream 55067 19161617 ~ 19164767 (-)
G177746 cops4,csn4,LOC106562268 non-coding upstream 1743 19237351 ~ 19240764 (-)
G177751 cwc27,LOC107744252,LOC107713303 non-coding upstream 25413 19261021 ~ 19266467 (-)
G177762 NA non-coding upstream 105934 19341542 ~ 19341849 (-)
G177770 NA non-coding upstream 162340 19397948 ~ 19401691 (-)
G177766 NA non-coding upstream 212160 19447768 ~ 19449065 (-)
LOC103035567 LOC103035567,LOC108425166 other downstream 91711 19119786 ~ 19128123 (-)
G177704 NA other downstream 127688 19091146 ~ 19092146 (-)
LOC103029522 LOC103029522,LOC107746207,LOC108440152,LOC107689072,LOC107658587,LOC107583405,LOC107758669,LOC106564675,LOC105890914 other downstream 285234 18887028 ~ 18934600 (-)
LOC111195059 NA other downstream 601222 18614892 ~ 18618612 (-)
nsd3 whsc1l1,LOC107720716,LOC107687514,LOC107705078 other downstream 688199 18485642 ~ 18531635 (-)
LOC111194984 sh2d4a other upstream 503041 19738649 ~ 19739313 (-)
G178173 NA other upstream 2055914 21291522 ~ 21295833 (-)
G178267 grin3a,LOC107710005,LOC107750958 other upstream 2697911 21933519 ~ 21933831 (-)
G178426 NA other upstream 3219889 22455497 ~ 22456779 (-)
LOC103023660 LOC103023660,LOC108440734,LOC108276836,LOC106926931 other upstream 3265710 22501318 ~ 22509783 (-)

Expression


Co-expression Network