fam159b


Basic Information

Item Value
gene id fam159b
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 19252744 ~ 19254807 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007255035.2
ATTCTCCTTAACAGCTTTATCCGTCCTCACAGCTCTACACGACCAGCAGACCAGCAGCAATGgctgatgtccacacatgtgagGGGTATTTTAAAGAGGGGGTCAGCTTTGTAGAGACCTTTATGTGCCCCCAAGATCCAGGGAGTCCAGAATTGGAGTACTGCTGTGGATTTGAGGATATGAAGTACTGCTGTGGTGAGCCTGGAAACTACTACCCGTACAAACACGCCTACATGTGGACCCTGAGTGCTGGTCTGCTGGTTGGACTCAGTATCGCCGCTTTGGTTCTGCTGGCGTTCCTCACCAGTGTTCTGGTGCTCTGCGTCCTTTTCCTTCGCACCAAACCTCAAAAGGCCGACACAGGGCTCAAATTGCGCAGCCAAACCAGCAGCCACAAAGCTGCAGATCCTCGAGATGCATCACTAAGAAGAGGCAGCAGAGGAAACACACAGCTGGAAACAAGAGCAACACTCACAAATCTAGAAAATGTAAATACTCAGATCTAACCATGCCATGCTGCTGGTGATTCTGAAGGCCAAAGTACATCCTCCATTCCTGGAAGATAACAGAAGCTTCCTTGTGGAAAGATATATGTGTATCTTTGGACCTTtgagccttttttatttatggctcttgtttttgtagttttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007255035.2 True 650 mRNA 0.48 3 19252744 19254807

Neighbor

gene id symbol gene type direction distance location
cops4 cops4,csn4,LOC106562268 coding upstream 8157 19237435 ~ 19244587 (+)
kiaa1958 kiaa1958,LOC107683261,LOC106568575 coding upstream 43315 19193304 ~ 19209429 (+)
LOC103036907 actr1,acty,LOC108425179,LOC103036907,LOC106585571,LOC105889177,LOC107602067 coding upstream 84215 19161614 ~ 19168529 (+)
LOC103033969 NA coding upstream 95641 19150409 ~ 19157103 (+)
LOC103034500 NA coding upstream 115021 19134111 ~ 19137723 (+)
cwc27 cwc27,LOC102784682 coding downstream 6397 19261204 ~ 19325401 (+)
ppwd1 ppwd1 coding downstream 177680 19432487 ~ 19445658 (+)
trappc13 trappc13,LOC107667267 coding downstream 205149 19459956 ~ 19475177 (+)
nln nln,LOC107705053,LOC107667266,LOC107548669 coding downstream 248750 19503557 ~ 19522073 (+)
erbin erbin,erbb2ip,LOC107667260,LOC107726559,LOC107705051,LOC107742960 coding downstream 339294 19594101 ~ 19651418 (+)
G177449 NA non-coding upstream 36624 19214411 ~ 19216120 (+)
G177448 inip,LOC107658659,LOC107558675,LOC107571239 non-coding upstream 39432 19210944 ~ 19213312 (+)
G177446 NA non-coding upstream 63015 19189073 ~ 19189729 (+)
G177445 NA non-coding upstream 63866 19188469 ~ 19188878 (+)
G177443 NA non-coding upstream 71094 19181111 ~ 19181650 (+)
G177472 NA non-coding downstream 99161 19353968 ~ 19358749 (+)
G177479 NA non-coding downstream 143141 19397948 ~ 19401681 (+)
G177485 NA non-coding downstream 156819 19411626 ~ 19479842 (+)
G177506 NA non-coding downstream 239368 19494175 ~ 19494374 (+)
LOC111195062 NA non-coding downstream 272120 19526927 ~ 19551020 (+)
LOC103024155 si:dkey-81j8.6,LOC108440140,LOC107720718,LOC107572716,LOC107678005,LOC105904646 other upstream 694300 18539898 ~ 18558444 (+)
LOC103047412 golga7,LOC108276767,LOC107553707,LOC107687624,LOC107678053,LOC107586122 other upstream 922255 18324873 ~ 18330489 (+)
G177219 NA other upstream 1026611 18224273 ~ 18226133 (+)
xpo7 xpo7,LOC107678024,LOC107586117 other upstream 1078226 18138712 ~ 18174518 (+)
G176882 inpp5j other upstream 2205755 17042835 ~ 17046989 (+)
LOC111194983 NA other downstream 465494 19720301 ~ 19722560 (+)
LOC103042206 LOC108428882 other downstream 496135 19750942 ~ 19775791 (+)
LOC103043854 NA other downstream 834431 20089238 ~ 20096711 (+)
G177950 NA other downstream 884015 20138822 ~ 20139564 (+)
ier3ip1 ier3ip1,LOC106633120 other downstream 1141570 20396377 ~ 20399165 (+)

Expression


Co-expression Network