fut10 (fut10)


Basic Information

Item Value
gene id fut10
gene name fut10
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 23203476 ~ 23217258 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007255267.3
CAGCGGAGAGTTTTCCGAACAATGCCGCCCCCCGAGCAGGAAGTTTGGAGGCACAGTGAGAAAAATGGCCGGACTGCATCCAAACACTGCACTCTGAACTGGACACTGCCAGGAATATAAGGGTTATACAGTTAAATCCTGTCCTCTGGTgtgatatttattatttctccGCAGCTGAAGTGAATCATGAGACGCATCGCTCTGACTGTATTCATCCGCGCAGGACTGCTGACATGGCGAGACTTCTTTCTGTTAGGAGACTGTtcgctgtgtgtctctgtgggTCAGCGGCAGTTTTCCTAATCATAACTCTTCAGGTCGTAGAGGAACTGGGCCAGTTTGAGCAGAAGGCTCACAGACTCCCCCTGAAAGAAAGACAAGAGTTAACACAGATCCAGCCGGACAGCAGTTTGCTCACTGAGGACAAGATATCTGCTGCTTCAGAAGACTGGTACCCCTTTATAGTGTGGTGGTCCCCACTGACTGGTGAGCTGGGACGGCTTGGGGAGTGTGGCAGTAACAGATGTTTTTTCACCATCAATAAATCCCATCATGCTCACCCTTCGACTCACGCCTTCCTGTTTTATGGTACGGACCTTAACGTCGAGAGCCTCCCTCTTCCAAGGAAAGAGCATCATCAGTGGGCTCTGTTCCACGAAGAGTCGCCCAAGAACAACTACAAGCTCTTTCACGAGCCGGTTATCACACTTTTCAACCACACTGCCAGCTTTAGCCGCCACTCCCAACTCCCCCTGACCACCCAGCACCTGGAGAGCCTCCGAGTGCTGACCTCCCACACATACCTGCTGCCCCTCGCTCAGAAGAACCACCTGAGACACACTCTGGCTCCCGTGGTCTACGTCCAGTCCGACTGTGACCCTCCATCAGATAGAGACGTCTACGTTCAGGAGCTTATGAAGCACATCCAAGTGGACAGCTATGGGCAGTGCCTCAACAACAAGCATCTGCCCCCACACCTCAGAGACTCTACAGCTATGGAGGAACAGAGCTTTTACCAGATCCTGGCCCAGTATAAGTTCATCCTGGCTTTCGAGAATGCCATCTGTGACGACTACATTACAGAGAAACTGTGGCGGCCGCTCAAACTGGGAGTGGTTCCTGTGTACTACGGAGCCCCGAATGTGCACATGTGGCTCCCCAGTAACAGGAGTGCAATCGTGGTTGACCCCAATGAACCTCCAGAGAAACTGGCCCAGTATTTAAAGAGACTGGATAAAAACGACTGGGAGTATTTAACATATCTAGACTGGAAGATGAAGCAAGAAATCTCAAATCAGAGACTAGTTAAAGAACTGAAGGAGCGTAGCTGGGGAGTCCAGGATATCACCCAGGATAACTTCATAGATGTCTTTGAGTGCATGGTGTGTAACCGGGTCTGGGAGAACATCAACAGACAAAAAGAGGGTCTGCCTCCCCGACTGTGGCAGGCTGAAGCGGACCACCTGAAGTGCCCACCGCCGAGGCTCTTTGActtttctgcagctcctccgaACAGCACGTCTCTGCGGCGTATCTGGAGAGCGAGTTACGCTCAGTCTGAGAAGGAAGCCCGAGCGCTGAGACGGCTCGTCCTGAGGAACACTAACTTCACCCTCACACAGTTCTGGAGGGAGGTCTTCACTGACTGAATGTGCATGCTCTTgttttatagattaaaacatttGGTATAGatttaaaagtttggatacCTTAAGTGAGGTGTACACAGCTTAATGCAATCAGTGTTTAGTTTATTCAGGTTTACTGTAATGTTACTGCACAGAGATGCCTTTTGAGGTAGACTGATACAAAGCCTTGGTTACAGTTACACAGATGGCTGTGatgttctctttttctttctttctgtttcttgaAATCTGTATCAGATTGAATTTTACACAAGCTGTAGGCATGTGATATTTTGCTGGGCTGATATATCTCTACAGGAATGTGGACTATATACAATAATGTCCTGCtgcttatacagtattttagagaAAAGATAAGATATtaatcttttttctattttttgttcCTGCAATTTTCACTTTaacataatttgaaaaaaaagctGGATTTGATTCTTGGAAGTGCCCTGGATTCATGGAATACACGTTGTCTTGGTTTGGGGTATCTTGTAAACAACTTCAGTCATAAAAATAGCAGGTTTTTCAAGAGTGATTAGTCCATTGgggtttaaataatacataaataaattagggttaaataataatgttaaacatttaaactgttaaacatCTAAAGTTGTCCAGTAGAGTCTGGCAACAAGACCTATGgtagcagcagatcctttagGTTCTGTAAGTTGTAAGATAAGGCCTACAAAAGGACTGCACCAGTGAGCCTAAGATATCCATCACCACTTGGAGCATGTTTGATtggtactgaccactgcataccagAAAAAAACCCActagacctgcctgatgttttggaggTGCTCTGAACCTTCCAGTGATCCAGTCAACTGTCACAATGTGGCTCTTATGAATGTGACTCAAATTTTGACACTTGCTATTTTGTTCTGATTTTGAAACATCAGCTTCATGAACTGACTGTTCATTTGCTGCCTAATATCTAATGTACCAATCTTCTCAACAGATGTCATTGTAGATTAAGATATAAGGATATCTTTAATTTTACCGGTTAGTgtgatacattttacattttgctgaCCAGTGTACTTGCACATCATGTAATTAATTTCACTAGTATGCATACTAATACACAATTACTAAAATTTACTGTTATGACTTTCAGTATTTTAGCCTCAGTGTTCTTGTTCTTCTGTGTTAATATGTAATCTATGCATGTTGCTAACTTGATCTCAGggtaggattttttttgtttattgtgccTTCCTAGCACAACATAAAAgggctaaactctaaacacatccaaacacacacttaaccaTATGACCTTAAAACTAAAGCATTCAAATCTGTTATAATACAACCCCACTTaccaaaaatctaaaatacctCTTTTATATTCAATCATAGAAGTTAGTTGCAATTTGCCTCTAttgtagctgtttttttgttagtaCCACTAACTTTTGATGTCAAGTTCTAAATAACAGCACACATGCCCAGAGTGGGGGGCAGCAATCAGTCCAGCAAACCTGGATATTGAACCTAtaaaccttttttgtttttttaaatgctcctttgctctaaccactgagacACTGGTTTCGGTTAATGTTTCACTTTCAGCATCTGATGTTTTTGATTTTACAGCAccccaacttttttggaattggggttg

Function

symbol description
fut10 Predicted to enable alpha-(1->3)-fucosyltransferase activity. Predicted to be involved in fucosylation. Predicted to act upstream of or within protein glycosylation. Predicted to be located in Golgi cisterna membrane and Golgi membrane. Predicted to be integral component of membrane. Orthologous to human FUT10 (fucosyltransferase 10).

NR:

description
alpha-(1,3)-fucosyltransferase 10

GO:

id name namespace
GO:0006486 protein glycosylation biological_process
GO:0032580 Golgi cisterna membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0046920 alpha-(1->3)-fucosyltransferase activity molecular_function

KEGG:

id description
K09669 FUT10; alpha-1,3-fucosyltransferase 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007255267.3 True 3294 mRNA 0.43 4 23203476 23217258

Neighbor

gene id symbol gene type direction distance location
LOC103038592 LOC106571427,LOC108427269,LOC108276947 coding upstream 16252 22995089 ~ 23187224 (+)
LOC111194985 NA coding upstream 230471 22970422 ~ 22973005 (+)
LOC111194992 NA coding upstream 236948 22964993 ~ 22966528 (+)
slc38a9 slc38a9,LOC107670042,LOC107564110,LOC107740785,LOC107566906,LOC107715861 coding upstream 275232 22908793 ~ 22928244 (+)
il6st NA coding upstream 323162 22865141 ~ 22880314 (+)
purg NA coding downstream 242110 23459368 ~ 23461975 (+)
LOC111188215 NA coding downstream 262279 23479537 ~ 23494300 (+)
LOC103034079 NA coding downstream 276896 23494154 ~ 23497618 (+)
ppp2cb ppp2cb,LOC107758729 coding downstream 286049 23503307 ~ 23514711 (+)
LOC103037096 LOC108410414,LOC108277158,LOC105901021,LOC106603263 coding downstream 324592 23541850 ~ 23690355 (+)
G178482 sh2d4a non-coding upstream 246317 22950963 ~ 22957159 (+)
G178477 NA non-coding upstream 260127 22943126 ~ 22943349 (+)
G178474 NA non-coding upstream 261855 22935483 ~ 22941621 (+)
G178476 NA non-coding upstream 262327 22940604 ~ 22941149 (+)
G178472 NA non-coding upstream 272531 22930223 ~ 22930945 (+)
G178578 NA non-coding downstream 43313 23260571 ~ 23263280 (+)
LOC111195072 NA non-coding downstream 57191 23274449 ~ 23348016 (+)
G178614 NA non-coding downstream 179765 23397023 ~ 23397235 (+)
G178616 NA non-coding downstream 185712 23402970 ~ 23403734 (+)
G178617 NA non-coding downstream 193847 23411105 ~ 23418343 (+)
G178485 NA other upstream 238487 22963447 ~ 22964989 (+)
G178388 hmgcs1,LOC108427280,LOC108277226,LOC107737058 other upstream 493919 22689001 ~ 22709557 (+)
G178352 NA other upstream 657346 22544640 ~ 22546130 (+)
LOC103022948 hnrnpd,LOC108440733,LOC108276832,LOC107702593 other upstream 701317 22493440 ~ 22502159 (+)
hnrnpdl hnrnpdl,LOC107715891,LOC107702595,LOC107653490 other upstream 711973 22486823 ~ 22491503 (+)
LOC103032894 LOC108424565 other downstream 1230534 24447792 ~ 24454622 (+)
smpd1 smpd1,LOC107718723,LOC107720657,LOC107556869 other downstream 2026903 25244161 ~ 25257469 (+)
LOC103024073 LOC108424537 other downstream 3613379 26830637 ~ 26879083 (+)
rnasek rnasek,LOC107554319 other downstream 3696492 26913750 ~ 26916344 (+)
LOC103038954 zgc:101846,LOC106525086,LOC108416226,LOC101161532 other downstream 4307044 27524302 ~ 27525441 (+)

Expression


Co-expression Network