LOC103043274


Basic Information

Item Value
gene id LOC103043274
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 14263394 ~ 14281729 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007259441.3
TCTGTTTTTGTgactctgtgctggagaaagtGCTGCTGAGGATGCTGTAGCATGGTTCTGACACACACAGGCTGGTTTAGTGCTGCAACATGTGTGGGATCGTCAGTGCCTGGTTATTCCTGGTGGTCTGCAGCCTCGCCAGAGGACACAACACTTTGTATGAAGGCTATGCCCTCTCCGGGTCCAGTTACCACCTCTGCACTGGGCAGGACTCTGTGCCGGTCATTAATGTGGTCGCCTATCAGATTGCTTCTTCTCAGCTGAGGCCTTGTGGAGGCTGGCTGCCGTGGAAAATGTGTAATGTGACAGTTTACACCACAGTTTATAAAACCCAGGAGGATCACATCCAGAAAGAGGTCAGGAGGTGCTGCGACGGCTACGAACAAGTGGGCAGTTACTGCGCCCTGAATCTTAACAGGAGTGCGGAGTTCACAGCTAAACCCGGAGTGTGCCCTCATGCACATCCAGGACTCAGCCCAGGCCCAGTGTTGGGGTGTGAGTGGGACACAGACTGTCCCGGCTGGCAGAAATGCTGTCAGACTGAAAACAGTCTCCGCTGTGTAGATCCTCACACACAAGTGAATATCAGCTGGTGGCTCAGTCTGAATGTAACGGTGAAGGTCTCGTACCATCTGGTGAATTCCAGCAGTGGACTCTTCAACCACACACGGCTCCTACACTCTGTGgtgACTGGAGCTCTTAGTTTTCCTTCAGTCTCTGTGTATCATGTGACCTCATGGCCCGCTGGACCGGTCAGTACTGTCTCCTTCATGCTGCTTGGATCCTCTGAACCTTTGTCCCCTGCAGAGACAGACCAGAGGCTGCAGGTTCTGCTGGAGAACATCGAGGAGGTCACCAGTGTGAACATCAACGatgtgGATGAGTGTGTTACTCCAGTGCTGAAAGCATGCCCCCCTCAGTCCATATGCAGAAACACATATGGATCACAGAACTGCACCTGTCCACCAGGATCTACTGACCTTCACCCCAGCAGGCCTGGAACAAACTGCACCTTCCAGATTGTACTCACTTCAAATCCGGTGCGGAAACCTTCTGTTGATCAAACACCAGCCTTCACTTCTCTGTCCAGCACATCCTCTAGCACAACAACCAGCACTCCTATCAGCCCTCTGACCACTAACGGCTTTCCGTCTCCTGAAAACAGTAATAAGACCCTTCATGCAGAGGCTCGTCTGACCAATATAAACTTCACCGATGCTCTGAAAGATGTCACCAGTGTGGAATACCATAACCTCACAGAGTCCATCATCAAAGAGATTAAAGAGTCTCTGCCCTCAGAcattctggacatggtgaactcTGGGAAAGTGATTGTTCAGATCACTAGATTCTTTCAAGGCAGCGTGGTGGTAAAGTTCACCCTGATTTTCCTGCTCGACAGCACCCAGAACATCAGTACTGTGGCCAGTGCTTTGATGGAGTCTCTACAGAACAGCACCATATACTTAGTGGACAAGAACAGCACCTTTATAAACGATGTGGATGAGTGTACAACGGGTGAGAATGACTGTTCCCCCTGGGCCCAGTGTAACAACACCTATGGGTCGTACACCTGCGCCTGTCAGCCAGGATACACTGACGCAAACCACTCGAGGCCTGGACGCATCTGTGAAGCCAGCCTCAATTTGACAGCATCCACCTCCACACAGCCGAATGAGGCATCTGCTGAGTCCTCTGCATCTACAAACCTAACAACTGTGACAGCTGACAATGAGACACACACAACCACTCCTGTTTCCAAAACAACCACAGTCATGGCTGTTCCAGAAATCGAGAGAGTGAACTTGACTTCCTCAACATCACCTACAACGTCTACAATGTTATCTACAGCATCATCTACAGCTTTATCTACAGCATCAGCTACAGCTTTATCTACAGGAGTATCTACAGCATCTACAATATCAGCCACAACATCCACCGCAATCCCCAATCCCCTCCCGATCATTTCCAGAACAGATGCCATTACAGTGGAATGTATGGTGGGATCCATGACCGTCTCTGTGGCAAAACATTACCTGATATCTCACCACATCCCAGAAGCAGCCCTGTACCTGGGTCAACCACAGTGCAATGTGACGAACACAAACTCCACCCATGTACAGCTCACTGCGGACTGGAACAAGTGTGGGCTCCAGATAACTGAAAACACCACAGTCCGTGTGACCCTCCACAGCAACATGACCACATCAGTGCCATTTATTCTGAGGCCGTTTGTACAGCTGGAGGTGCCAATCATCTGCGTCTACTCACACAGTATCAACGTCTCCACTGGATACGAGTCCTCCAGTGATGTTGATAAGATCAATGACCCGGTGCTGGGATCAGGGAACTTCCAGGTGACTATTCGTCTGCTGAATGGAACAATCCCCCTACCTCAGAACTACACCCTCTCCCCCGGGGAGCAGGTGACCATAGAGGTGGCAGTCAATTCCAATGTGTCCCAAATAAAAGTGGTCATCAACCAATGTTGGGCGAACACCAACAGCAACCCAGACCCTCCCCTATACATCTTCCTGAAAGGCAGCTGTCCTGTTTCAGAATACGCAACTGTGATACAGAACGGCGTCTCCTCAAAGTCTCTTCTGGAAGTGAATGTTTTCTCTCTAGTGAATCTGGATATCATTTACTTGCACTGCCAGATCCAAATCTGCATTGAGACGGCATCAGCCACCTGCCAACCTGACTGTACGGCAAGGAGCTCCAGAGCTGGTAATGTAATTGGAATGGCAAAAGCTTCATATGGACCCTTGAGGAGGTCACATCAAGTGACTCTGGATGAGGTTATTCAGGGTACGCGTGCCATCGGCTTCATTGTGCTGGGAGTCGGCCTGTTTGTTTTCATCGTCGTGGGCGTGGCAGCCTTTTCTTACTACAGAAAGAAAATGGGAAACTACAACTTTCACTTTAGACCCCGACCAGAGAACTTCACATATCATGTCTTTGACACCTAGACCAGACTACGGTCATGTTTAGTAAGGGCTCTGCAGTTTTAGTCATACAGAACTACATAGAACAATTCATGGCTCATAGTGTCTTAGGGTctgagctgcagtttattaCTCAGAACTTCAGAgcttacacacattcacatacactGCCACTACTGTATACTGAATCATCTGTGAGCCTATGTTAGTAAACAAGAATAATTCAGATTAATAACTGAATGACGCATCTGTTAAAGGAGTTAAACCAGGTAAAATGTTTTGtagtttaacatgtttttgtgtttggcATTAATGTCACTGTACTTTATGATGCCCAACATTTGATCTACATACGATGCACTTTAGAAGCTTTATTTGATGCTCACATACTGTATACTTCAAATATTCTACAGACTGGTGAATAAAACTATAGCTCTATTGTATtgtgaaaatgtttattaaaaacacattacaacGTCC

Function

GO: NA

KEGG:

id description
K24499 UMODL1; uromodulin-like 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007259441.3 True 3428 mRNA 0.48 16 14263394 14281729

Neighbor

gene id symbol gene type direction distance location
atg101 atg101,LOC107751375,LOC107686213,LOC107589731,LOC107691654,LOC107577413 coding upstream 15735 14244212 ~ 14247659 (+)
trim37 trim37,LOC107691657,LOC107577452 coding upstream 132704 14101949 ~ 14130690 (+)
rabgef1 rabgef1,LOC107734461,LOC107577469,LOC107728875 coding upstream 164701 14082474 ~ 14098693 (+)
kctd7 kctd7,LOC108415927,LOC107588867,LOC107686134,LOC106603469 coding upstream 186158 14071214 ~ 14077236 (+)
LOC111195113 NA coding upstream 342777 13913928 ~ 13920617 (+)
mogat2 mogat2 coding downstream 35676 14317405 ~ 14331559 (+)
dgat2 dgat2,LOC107746984 coding downstream 58679 14340408 ~ 14352188 (+)
uvrag uvrag,LOC108413435,LOC108411119 coding downstream 74567 14356296 ~ 14506004 (+)
LOC111195050 NA coding downstream 441254 14722983 ~ 14729064 (+)
LOC103022111 LOC103022111 coding downstream 637130 14918859 ~ 14921856 (+)
LOC103042124 NA non-coding upstream 20251 14142167 ~ 14243143 (+)
G175984 NA non-coding upstream 38695 14178804 ~ 14224699 (+)
G175966 NA non-coding upstream 92323 14114094 ~ 14171071 (+)
G175946 NA non-coding upstream 334277 13920530 ~ 13929117 (+)
LOC111194981 NA non-coding upstream 334277 13926240 ~ 13929117 (+)
G175999 NA non-coding downstream 2498 14284227 ~ 14286973 (+)
G176000 NA non-coding downstream 3573 14285302 ~ 14288274 (+)
G176010 NA non-coding downstream 254539 14536268 ~ 14536547 (+)
G176216 NA non-coding downstream 388555 14670284 ~ 14670678 (+)
G176258 NA non-coding downstream 557781 14839510 ~ 14917161 (+)
LOC103039555 LOC108415819 other upstream 194032 13951405 ~ 14069362 (+)
LOC103038733 bcl7b other upstream 374350 13798639 ~ 13889044 (+)
prdm15 LOC108413920,LOC106511912 other upstream 394539 13847262 ~ 13868855 (+)
G175900 NA other upstream 577831 13679359 ~ 13685563 (+)
LOC111195048 fgf13b,LOC108444526,LOC107555168,LOC107718748,LOC107548853,LOC107720625,LOC107693932 other upstream 844978 13353768 ~ 13418416 (+)
LOC103047397 unc13b,LOC107686461,LOC107688005 other downstream 1512535 15794264 ~ 15973657 (+)
fam136a fam136a,LOC102792467 other downstream 2539206 16820935 ~ 16824328 (+)
G176882 inpp5j other downstream 2761106 17042835 ~ 17046989 (+)
xpo7 xpo7,LOC107678024,LOC107586117 other downstream 3856983 18138712 ~ 18174518 (+)
G177219 NA other downstream 3942544 18224273 ~ 18226133 (+)

Expression


Co-expression Network