LOC103045405 (LOC103045405,LOC108442105)


Basic Information

Item Value
gene id LOC103045405
gene name LOC103045405,LOC108442105
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 14715511 ~ 14720986 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007259448.3
GCAAAGCACTGTGGGTCCTCTGAGCGCTGACTCCTCCAGACCGCACAAAGCACTCGTGAGCGCCTCGAATTCAGCTCTAAAACCAGCGCTGCTGAAGTTTCCACCGTCCCCGTTCCCGACTCGTCCGGTTCAGTGATGTCTGCTGCCTGAGCGGAGCCGCTGTTTTGGAGGAAAACCGCGGTAAAAATGCCCAACTTCTGCGCGGCGCTGCACTGCGCGCGCATGAGCTCGCACTCGGTGCTGGCATTCTTCAGGTTTCCGCGCGACCCGGAGAGGTGCAAGAAGTGGGTGGAGAACTGTAGTCGCTCAGATCTGAGAGACAAAACTCCAGAACATCTGAACAAGTACCACAGACTATGTGCCAGACACTTTGAACCAGACCTGATTTTGAAAACAAGCCCTTTCAGGACGGTTCTAAAAGATACTGCCATACCAACAATCTTTGACCATCCCATCAATAAGCGAGCGAAGAATGAGCCGGCAGAAGATGAGGCCACCCaggcaaaagtaaaaaaagTGGAGGAGaaggagacagaaaaagaagctGCCGAGAGTACTAATGGCCAAGAGGCTGATAATGGCCCCCAGGTTTCAGATGTGGAGAAGGAAAACAAGGAATTTCTTCGTTCACTATTTGATGTTCTAGTCATGATGGGCAGGCAGAACATTCCTCTGCATGGCCATTCTGAAAAGGAGCCGAAAAGCAAAAGCTTCACACCCAGCAACTTCCAGGCCCTGTTGGAGTATCGCATTAATGCTGGTGATGAAGTGCTCAGGAAAAAGTTTGAAACATCGGCCGTTAATTTAGAGTACTGCTCATCCACCCAGCTGCAGCAGATTCTGGATGTAAGTGAGAAGTGCATCTGTGAAGATTTGCTTGCTGAAGTCAGGGAGGCACGTTTTTTCTCGCTGGTAATGGACAACCTTGTGGAGGTTTCAGGGGAGAAGCACCTTCCTTTGCTGATTCGCTTCGTAGACCAGACTAACAGCGTACGAGAGGAGTTTTTAGGGTTTCATCGCTTTGAAGGAGATGTGGAGGCCATCGCCCAAAGCCTTTGTACAGAAATGTCTGAGAAGTATGGCCTGAGCATGGAGCAATGCAGGGGGCAGGCATACTTTAGTACTGGGGTGTATGCTTTTAAAGTCAAAGCTGTGGCCATTAGACTGAGTGAGCAGTATCCTTTAGCTGTGTTCACACCATGCTCTCCTCATTCCCTGAACATCTGCTTGGCCAACAGCATGAACTTTACGAGTGTACAGCTTGTGATGTCCACCCTGAAAAAGATTGATGGGTTCTTCAGCAAATCACCTTTGCTACAGAATCAGCTGGAGAATGCAATTTCTATCTACTACCAGGGCAACGAGGAGAAAGGAGCTGCACTTAAAGAAACTTGCCACACCAACTGGACTGAACAGCATGATGCATTTGAGTTGGCTGTTGACCTGTTGGAGTCTTTGCTTCTCTGCATGGACAGCGTTCATGACAATGAAGAATTCAAATGGAGTGACGATATTGCGCACAACGCTTTTGTCATATCTGAAGCACTGTCCGATTTTGAGTTTGTCATGGCATTAGTTGTGCTAAAGaacactctttctttttccagagcCTTCGGTAAGAATCTTCAAGGCCAAACTAGTGAGGTCTTCTTTGCCGCAAGCAGTTTGACTGCCGTTCTCCATTCTGTAAACGAAGTTCTGGAGAACATTGAGGTTTACCACGAATTCTGGTTTGAAGAGGCTGTCAACTTGGCTGCAGCATTGGAGATCCCGGTCAAAATCCCCAGGCTTTTTTTCAGAAAGCAGCGCCCAGATGCGACCGAGGAAATCCAGCCTGAGGTCTATTACAAAGTTCACCTCACCTTTCCAGTGGTGAGTCATGTTCTGAAGGAGCTAAGTGACTTTTTTTCGGAAAACCACCTCAAGGCTCTCAAGTCTCTGTCTTTGGTTCCTGCAATCATGGGGCAGCTCAAGTTCAACACAGAAGAAAATAGCGCAGACATCTACAAGGATGACTTGCCCAATCCAGACACGTTACCCACTGAGCTCAACTGCTGGAAGATCAAATGGAAGCACGGCACCAAGAACGTTACTCTGCCTTCCACCATCTATGAAACACTTCAGCTCTCTGATGTGAAGTTTTTCCCAAACGTCTGCGCAGTCCTCAAAATCCTGAGCTGCCTGCCTGTCCTTTCACTCGTTGATGATCGATGCAGCACAGCAAGAAAGCGGCTGATGACGTATCTGCAGGACACGCCTgccaaacacagaaacaaaactTTGGCAATGTTTAACATTAACTGTGGTGCTGGGCATGACCTAGACTTGATGGTTGAAACCTACTTAAAACTTTACCCAGATAAAGAACCAACAGAGACAACAGAAACACCTGCTTGATCAAGTGGACATAAAAGCCTGTATCATTTGCTTAgaataaaaatgcaataatttTGCAGCTAGAACTTATCTTGGTTTTATGTACAGTGATCCACTGCCACAAACCCCTCAGAGTTTGTTTTTTCTAGTCTATTTGGGTGGTTTGAGTGTAAATACTAGTGTTTCTAAACCCTGATCCTGGAAGCCCGCTCCACTGCACACCTTGGTaattttcctgctttaacacacctaCGCCGTGATGATCAGTTAATGCGCTAATGAGTAGGGTCAGGAAAACTTTCAAAAGTGTAGGGCAGTGGGTCTCCAGGACAAGGGTTTAGAAACACAGGTATACCTGTCtaagtgggaaaaaaaaacaattagaacCTGTCTGGGTATTCAAAATGTGTTGTTTGGCCAAATATTAGAAATTCATTTTTAGAATGAATTTCATTGCATTGCTAGTCTGTGTTCTCAGCTTGTTCTTTACTGTTCTTCACTTCTTCACAACTTCTTGCcaatttacaaattaaacatttcagtaagtttttttattcttggtcAGAAATTAAATAAGCTGTCATTTGTTACTTTCTCTTAGTTCActagtaaataaataactttacatacAATTT

Function

NR:

description
52 kDa repressor of the inhibitor of the protein kinase

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0003676 nucleic acid binding molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007259448.3 True 3011 mRNA 0.45 5 14715511 14720986

Neighbor

gene id symbol gene type direction distance location
LOC103045094 NA coding downstream 671 14692680 ~ 14714840 (-)
LOC103043578 LOC108411121 coding downstream 400678 14285938 ~ 14314833 (-)
zbtb21 zbtb21 coding downstream 458291 14248668 ~ 14257220 (-)
rad51c rad51c coding downstream 471411 14229557 ~ 14244100 (-)
ppm1e ppm1e,LOC102780278 coding downstream 493200 14142174 ~ 14222311 (-)
LOC103045698 NA coding upstream 10615 14731601 ~ 14736873 (-)
LOC103046216 lhfp,LOC103046216,LOC108442104,LOC107691645,LOC107577306,LOC107751385,LOC107746987,LOC107589696,LOC107686123 coding upstream 22330 14743316 ~ 14795102 (-)
LOC103046520 LOC108442103 coding upstream 140721 14861707 ~ 14902599 (-)
ap4m1 ap4m1,LOC107742404,LOC107702797,LOC107720677,LOC107554303 coding upstream 182540 14903526 ~ 14913222 (-)
trnat-agu_12 NA coding upstream 206706 14927692 ~ 14927765 (-)
G176203 NA non-coding downstream 143038 14572010 ~ 14572473 (-)
G176184 NA non-coding downstream 363384 14318721 ~ 14352127 (-)
G176179 NA non-coding downstream 441149 14273468 ~ 14274362 (-)
G176154 NA non-coding downstream 609433 14101882 ~ 14106078 (-)
G176134 rabgef1,LOC107734461 non-coding downstream 616833 14096250 ~ 14098678 (-)
G176248 NA non-coding upstream 7352 14728338 ~ 14728932 (-)
G176277 NA non-coding upstream 118520 14839506 ~ 14844568 (-)
G176308 NA non-coding upstream 234317 14955303 ~ 14955563 (-)
G176415 NA non-coding upstream 492135 15213121 ~ 15213420 (-)
G176421 NA non-coding upstream 521804 15242790 ~ 15243027 (-)
LOC103044788 wnt11,wnt11r,LOC107686210,LOC107589704,LOC107747044 other downstream 44841 14657270 ~ 14670670 (-)
G176138 NA other downstream 642827 14069749 ~ 14072684 (-)
G176136 LOC108415819 other downstream 649367 14063500 ~ 14066144 (-)
G176146 LOC108415819 other downstream 663550 14051562 ~ 14051961 (-)
tex14 NA other downstream 901001 13774803 ~ 13814510 (-)
LOC111194989 NA other upstream 807310 15528296 ~ 15565463 (-)
stoml2 stoml2,LOC107686459,LOC107688641,LOC107569390,LOC106563216 other upstream 1059569 15780555 ~ 15790644 (-)
G177526 NA other upstream 3450863 18171849 ~ 18174525 (-)
G177568 NA other upstream 3676596 18397582 ~ 18403008 (-)
nsd3 whsc1l1,LOC107720716,LOC107687514,LOC107705078 other upstream 3764656 18485642 ~ 18531635 (-)

Expression


Co-expression Network