cst8



Basic Information


Item Value
gene id cst8
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 21285246 ~ 21295849 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>XM_007260811.3
TGCCGATCAGAGCTAAAAAGTACTGTGTGGGTTCAGCTGGTGAGAGGGGCTAGTCTATACATCACCGGCCCTGTTCTCCCTCCTCATAGAGTTCAAGCTGCTCAGTGAAGACAGAAGCTGGTGGAGATAGGGAGCAGCCCATGGACAGCctcagcagcaggctacaggcttaACGCAtCTCTTGCTCCTGCTGTAGAGAGAACACAGCTGTAAGCATGGATCTGTACCTCTTTCTGCTGTTCGGGTTTCTCTCTGTGGCCCAGCTGATTGAAGCCCAGCCGCCCATAGAGGAGGAAGAGATTACAGCAATAAATGTTAACCCTTTGGGAGGCTGGTCAGAAGCCCACTCTGAAAGGGAGGATGTCCAAGCGGCGGCTAAGAAAGCTGTGGAGAAGTTCAATATGAAATCCAAGGCCAAGAAGTATTTCAAGCTTCTGGAGATTACATCTGCACAAACACAGGTCACCAACATGATCAACTTCAAGATTGAAGCAACCATTGCAAAGACTAAGTGCCTAAAAACAGAGCCGGCAGATTTGGAGACCTGTGCTTTGGCACAaaagCGGCTGTCGTGCGAGTTTGAGGTTGAGTTCAACCCCAGGAACGATCAGTACAACATAAGGAAGATCTCCTGTAAGAAGTGATGCTGTTTTTATCGTGGACCTGAGTGTGAACAGAACTAACTGTACAGTTGCACCCCATcatacatgaacaggattttaTTGTTACTGTAGGAGGAATAGAGGAGCTTTCACTCACATAGAATAAGTATAATTGTTGTAGGTaggggctgggcaatatggtatacattttatataattatattgaaAGACTGCAGATTTTTACAATGGGTGCACTGAATGTTTGTTAGTATTTAGTGTTCAGTTTTATAAGCAAAAaggctgaataattcatagagaaCAATTACTTGCAGTCATATTGCAGAGTTTTCTCTAACATTGGGATGATTTTAAACACTAGTGACAGGTATCAAGTATCGTCTTTTTTCCAGCTAAAAGATAATGCACAGGCTGGACAGGGCTAGGATAATAATGTTACCTGAGCtaatttagctttagcatttgtttttgttaactAAAAGACTGACTGTCGAGTTAGTTAGCTACATGTGACTTGAGTGTCACAGGCAaattgaggtaaatgtatgactaaaattacaCTACTAAAGTGTAGTTATGATTTGAATAGCAATAATGATtaaaatggcactgctgagatGTAATTATTCtctttataataaaacattcaatgggttagtgttctttaagcatcaATTATATCCACAATATACTAAGAAAAGTAAATTTTGtcattacaataaaatattgcaatattgcccagcccttGATGCAGGACATGAGATGTATTGATGTACTAAACCTGAATGGCTCCCTCTGGAAGGGAAATCCTATTTTGATACTAAAACCTGTGAAAAAGTGTAATCTTATACATTTTGTAAGACTTGGAAATGGATatgcattatttaaaatgaaataaacagatATGACTCATTA

Function


GO:

id name namespace
GO:0010466 negative regulation of peptidase activity biological_process
GO:0004869 cysteine-type endopeptidase inhibitor activity molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_007260811.3 True 1535 mRNA 0.40 6 21285246 21295849

Neighbor


gene id symbol gene type direction distance location
LOC103023250 NA coding upstream 26659 21203262 ~ 21258587 (+)
LOC103022731 cntfr,LOC107554853,LOC107756542,LOC107738850,LOC107554231 coding upstream 107788 20842037 ~ 21177458 (+)
galt galt,LOC107653127,LOC107667272 coding upstream 706461 20428762 ~ 20578785 (+)
hdhd2 hdhd2,LOC107738843,LOC107743237 coding upstream 877678 20403494 ~ 20407568 (+)
skor2 skor2,LOC107743073,LOC107653123,LOC107738854,LOC107558682 coding upstream 890090 20381689 ~ 20395156 (+)
musk musk coding downstream 30363 21326212 ~ 21369274 (+)
grin3a grin3a,LOC107750958,LOC107710005,LOC107702562,LOC107554227,LOC104941214 coding downstream 636482 21932331 ~ 21964708 (+)
LOC103047607 LOC103047607 coding downstream 1026871 22322720 ~ 22334543 (+)
sec31a sec31a coding downstream 1125513 22421362 ~ 22453611 (+)
tmem150c tmem150c,LOC107558260 coding downstream 1172588 22468437 ~ 22476305 (+)
G178105 NA non-coding upstream 20262 21237139 ~ 21264984 (+)
G178108 NA non-coding upstream 326763 20931781 ~ 20958483 (+)
G178097 NA non-coding upstream 563855 20721073 ~ 20721391 (+)
G178091 NA non-coding upstream 660218 20624779 ~ 20625028 (+)
G178088 NA non-coding upstream 682457 20602451 ~ 20602789 (+)
G178202 NA non-coding downstream 244728 21540577 ~ 21546968 (+)
G178233 NA non-coding downstream 403584 21699433 ~ 21699633 (+)
G178254 NA non-coding downstream 676865 21972714 ~ 21973034 (+)
G178278 NA non-coding downstream 803470 22099319 ~ 22099558 (+)
G178280 NA non-coding downstream 804191 22100040 ~ 22101283 (+)
ier3ip1 ier3ip1,LOC106633120 other upstream 886081 20396377 ~ 20399165 (+)
G177950 NA other upstream 1145682 20138822 ~ 20139564 (+)
LOC103043854 NA other upstream 1188535 20089238 ~ 20096711 (+)
LOC103042206 LOC108428882 other upstream 1509455 19750942 ~ 19775791 (+)
LOC111194983 NA other upstream 1562686 19720301 ~ 19722560 (+)
LOC103046694 LOC108440723,LOC108277161 other downstream 831272 22127121 ~ 22315307 (+)
LOC103025565 scd5 other downstream 1160470 22456319 ~ 22465729 (+)
hnrnpdl hnrnpdl,LOC107715891,LOC107702595,LOC107653490 other downstream 1190974 22486823 ~ 22491503 (+)
LOC103022948 hnrnpd,LOC108440733,LOC108276832,LOC107702593 other downstream 1197591 22493440 ~ 22502159 (+)
G178352 NA other downstream 1248791 22544640 ~ 22546130 (+)

Expression



Co-expression Network