styxl1


Basic Information

Item Value
gene id styxl1
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 35488602 ~ 35495295 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_015605427.2
CCCCAATGGTTACTGCGGCAACGACGTACATACACTAAGCGCGAGCTATCTGACTTGTCACTCCAGAACTacagaacagaaagaaaaaaaggaaccaGAGGTTCCAGCTACAATTAGACATTCGCtatgtaactaattactatttaaataaacactacagctcagagtttatattaaacacagtaatGGCTGGGACGGTTCTCTGTGAGCCCAGTGAGCTTTACAACATCCTGAACCAGAACCAGCGATACTCAAGACTCACCGAACCCAACTTCCTCTGTGTGATCGATACTCGAGCTGAAGGACCATATTTCTGCAGTCACATCATCACAGCCAAACATGCTAAGTGGGGTTCAGATGGAAAATGGATCATCCCTGCTGATGTGGAAGTTGAGAGCATGAGATATATCATTGTGTATGACAGCAATACAAGTTCCCTCCAAGATTCAGGACCAGCCACAGACTATGCTGAGAGCCTGGCAAAAGCAAGCCGTCATCCAGTTCAAATTCTTAAAGGAGGCTATGAGAGGTTTTCTGCCATCTACCCTTTCTTCAGAAACCAGAAAATTCTTTACACAATTAggGAACTGGAAAGCCTGGAGCCTTATCCAGTGGAAATTCTGCCTGGTCAGCTGTATATGGGTGAATTCAGGCAGGCAGCAAATCCTCAGATACTCAAAGACCTGAAACTGACTGCACTGATCAATGTTTCTGATGATTTAATgcTTGAAAATGGAAAGCTCACAGTCCTGCATATCCGAGTGTCGGATTCAGTGGATGCTGATTTGTCCAGTTCTTTCGAGAGTGTCTGCAATTTCCTGACATCTCACCTTGAGGCCAGATCTGTTGCTTTCATATTCTCAACTCATGGCATTAGTCGCTGCAGTGTTCTGGCCATGGCCTTCCTCATGCATCATCTACAATACACACTTAAGTCCTGGAGGAACGCAATCTTGCTCCACTGTGTACttgcctcttgacttgacttggcgTCTGTTAATAATCCATGTTTTCTAGTGTCTCCTTCTCTTTACTTACTCAGTGTGTTCCTGCCCTGTTTGCTggtttgtacagtttttttttacacctgtccTGCCCAGACAAGTGATTTATTGAACTGTGGCATTTAAGAAATGATTGATTGGCACCAACACACCCAATGTGTGCCACAAAGCAGTTTCCCACATCATTATTACTCCTCCTCCACCAACCTGAAATGTTGACACAAGACAGGTTGGGTCCATGGATTAACTCTGTTGGCACCAGATTCTGATTCTGCTGTTCAGTTGGGAAGTCTGTGCCCACTGCAGCCttagctttctgttcttggctgacagaagtggaatgtgtggaatttTGATTCAAGGTGTTGTATGTTCTAAATTACAACACCTTGCTCTGTTTACCACAAGTGTACAGAGGATAACCGAGCTACTGTAGCCATTCTGTCAGCTTGATCTCATCAACAAGGAGTTCACTGGATGTTTTGCTTTTATTGCCCTATTCTGGCAAAAAAAAGAACTAGAGACCATTGTGCTGAAAATTCTAGATATACTCAAACCAGCCCATATAGCATCAAGAATCATGCCACACTCAAACTCACTAAGATCACATTTTTTTCGATTCTAATGGTTAATGTGAACATTAGCTGAAGCTGTTGGCCGGTATCTGCATCGTTTTATGCACATTTTCAAGAGTAATAATGCAAACTTTcggtaaatcctataaacttcttttcacttctcaaatatcacagtgtttgtctgctatatgatatatataactgaaatttaatttattctgaacaaccaatgatttataaaggaaaatcatgaaaattgtCACGTACACGTGTTAGCAATGGGTGCTACATTCAACAATTAGAATGGGTGTCTAGATACTttgtacatataaataaagtgtacatactgtacatcctaaatgtttatattatattttaaagaacATTATGTGAACCATGTGGTTTAAAATTGaccttcacttcacttcagcaGGATTGGTATAAATCTGCAACATAACTGGAAACGAATGCTAAACCTCTTATGCAGACAGCAGGTTAGGCTGCAGACATGATTAATCTGCATCAATCATGAAACACATTAAAGTCCTCAAGCTGATTTGTGATTTTGGATCATGTTTAGGAAGCTTGGGATCACGTCCAAAAATGTAAAGCCAACATGAGGCCTAATCGTGGATTTGTGCAGCAACTGTCCAGCTGGGAGCTGTGTGTACTGG
>XM_022681499.1
CCCCAATGGTTACTGCGGCAACGACGTACATACACTAAGCGCGAGCTATCTGACTTGTCACTCCAGAACTacagaacagaaagaaaaaaaggaaccaGAGGTTCCAGCTACAATTAGACATTCGCtatgtaactaattactatttaaataaacactacagctcagagtttatattaaacacagtaatGGCTGGGACGGTTCTCTGTGAGCCCAGTGAGCTTTACAACATCCTGAACCAGAACCAGCGATACTCAAGACTCACCGAACCCAACTTCCTCTGTGTGATCGATACTCGAGCTGAAGGACCATATTTCTGCAGTCACATCATCACAGCCAAACATGCTAAGTGGGGTTCAGATGGAAAATGGATCATCCCTGCTGATGTGGAAGTTGAGAGCATGAGATATATCATTGTGTATGACAGCAATACAAGTTCCCTCCAAGATTCAGGACCAGCCACAGACTATGCTGAGAGCCTGGCAAAAGCAAGCCGTCATCCAGTTCAAATTCTTAAAGGAGGCTATGAGAGGTTTTCTGCCATCTACCCTTTCTTCAGAAACCAGAAAATTCTTTACACAATTAggGAACTGGAAAGCCTGGAGCCTTATCCAGTGGAAATTCTGCCTGGTCAGCTGTATATGGGTGAATTCAGGCAGGCAGCAAATCCTCAGATACTCAAAGACCTGAAACTGACTGCACTGATCAATGTTTCTGATGATTTAATgcTTGAAAATGGAAAGCTCACAGTCCTGCATATCCGAGTGTCGGATTCAGTGGATGCTGATTTGTCCAGTTCTTTCGAGAGTGTCTGCAATTTCCTGACATCTCACCTTGAGGCCAGATCTGTTGCTTTCATATTCTCAACTCATGGCATTAGTCGCTGCAGTGTTCTGGCCATGGCCTTCCTCATGCATCATCTACAATACACACTTAAGGAAGCTTGGGATCACGTCCAAAAATGTAAAGCCAACATGAGGCCTAATCGTGGATTTGTGCAGCAACTGTCCAGCTGGGAGCTGTGTGTACTGGGGAAGAAAATCACAGATATTTCAGAGCCCAACTACTGAAGATTGTGTCTGATTCTAATCTTatgtaaataaaagacaatGCCAGGTTTGGTTT
>XM_022681500.1
CCCCAATGGTTACTGCGGCAACGACGTACATACACTAAGCGCGAGCTATCTGACTTGTCACTCCAGAACTacagaacagaaagaaaaaaaggaaccaGAGGTTCCAGCTACAATTAGACATTCGCtatgtaactaattactatttaaataaacactacagctcagagtttatattaaacacagtaatGGCTGGGACGGTTCTCTGTGAGCCCAGTGAGCTTTACAACATCCTGAACCAGAACCAGCGATACTCAAGACTCACCGAACCCAACTTCCTCTGTGTGATCGATACTCGAGCTGAAGGACCATATTTCTGCAGTCACATCATCACAGCCAAACATGCTAAGTGGGGTTCAGATGGAAAATGGATCATCCCTGCTGATGTGGAAGTTGAGAGCATGAGATATATCATTGTGTATGACAGCAATACAAGTTCCCTCCAAGATTCAGGACCAGCCACAGACTATGCTGAGAGCCTGGCAAAAGCAAGCCGTCATCCAGTTCAAATTCTTAAAGGAGGCTATGAGAGGTTTTCTGCCATCTACCCTTTCTTCAGAAACCAGAAAATTCTTTACACAATTAggGAACTGGAAAGCCTGGAGCCTTATCCAGTGGAAATTCTGCCTGGTCAGCTGTATATGGGTGAATTCAGGCAGGCAGCAAATCCTCAGATACTCAAAGACCTGAAACTGACTGCACTGATCAATGTTTCTGATGATTTAATgcTTGAAAATGGAAAGCTCACAGTCCTGCATATCCGAGTGTCGGATTCAGTGGATGCTGATTTGTCCAGTTCTTTCGAGAGTGTCTGCAATTTCCTGACATCTCACCTTGAGGCCAGATCTGTTGCTTTCATATTCTCAACTCATGGCATTAGTCGCTGCAGTGTTCTGGCCATGGCCTTCCTCATGCATCATCTACAATACACACTTAAGcaGGATTGGTATAAATCTGCAACATAACTGGAAACGAATGCTAAACCTCTTATGCAGACAGCAGGTTAGGCTGCAGACATGATTAATCTGCATCAATCATGAAACACATTAAAGTCCTCAAGCTGATTTGTGATTTTGGATCATGTTTAGGAAGCTTGGGATCACGTCCAAAAATGTAAAGCCAACATGAGGCCTAATCGTGGATTTGTGCAGCAACTGTCCAGCTGGGAGCTGTGTGTACTGG
>XM_022681501.1
CCCCAATGGTTACTGCGGCAACGACGTACATACACTAAGCGCGAGCTATCTGACTTGTCACTCCAGAACTacagaacagaaagaaaaaaaggaaccaGAGGTTCCAGCTACAATTAGACATTCGCtatgtaactaattactatttaaataaacactacagctcagagtttatattaaacacagtaatGGCTGGGACGGTTCTCTGTGAGCCCAGTGAGCTTTACAACATCCTGAACCAGAACCAGCGATACTCAAGACTCACCGAACCCAACTTCCTCTGTGTGATCGATACTCGAGCTGAAGGACCATATTTCTGCAGTCACATCATCACAGCCAAACATGCTAAGTGGGGTTCAGATGGAAAATGGATCATCCCTGCTGATGTGGAAGTTGAGAGCATGAGATATATCATTGTGTATGACAGCAATACAAGTTCCCTCCAAGATTCAGGACCAGCCACAGACTATGCTGAGAGCCTGGCAAAAGCAAGCCGTCATCCAGTTCAAATTCTTAAAGGAGGCTATGAGAGGTTTTCTGCCATCTACCCTTTCTTCAGAAACCAGAAAATTCTTTACACAATTAggGAACTGGAAAGCCTGGAGCCTTATCCAGTGGAAATTCTGCCTGGTCAGCTGTATATGGGTGAATTCAGGCAGGCAGCAAATCCTCAGATACTCAAAGACCTGAAACTGACTGCACTGATCAATGTTTCTGATGATTTAATgcTTGAAAATGGAAAGCTCACAGTCCTGCATATCCGAGTGTCGGATTCAGTGGATGCTGATTTGTCCAGTTCTTTCGAGAGTGTCTGCAATTTCCTGACATCTCACCTTGAGGCCAGATCTGTTGCTTTCATATTCTCAACTCATGGCATTAGTCGCTGCAGTGTTCTGGCCATGGCCTTCCTCATGCATCATCTACAATACACACTTAAGGATTGGTATAAATCTGCAACATAACTGGAAACGAATGCTAAACCTCTTATGCAGACAGCAGGTTAGGCTGCAGACATGATTAATCTGCATCAATCATGAAACACATTAAAGTCCTCAAGCTGATTTGTGATTTTGGATCATGTTTAGGAAGCTTGGGATCACGTCCAAAAATGTAAAGCCAACATGAGGCCTAATCGTGGATTTGTGCAGCAACTGTCCAGCTGGGAGCTGTGTGTACTGG

Function

NR:

description
serine/threonine/tyrosine-interacting-like protein 1 isoform X3

GO:

id name namespace
GO:0006470 protein dephosphorylation biological_process
GO:0008138 protein tyrosine/serine/threonine phosphatase activity molecular_function

KEGG:

id description
K18047 STYXL1, DUSP24, MKSTYX; serine/threonine/tyrosine-interacting-like protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_015605427.2 True 2256 mRNA 0.41 8 35488602 35495202
XM_022681499.1 False 1122 mRNA 0.44 8 35488602 35495295
XM_022681500.1 False 1179 mRNA 0.44 8 35488602 35495202
XM_022681501.1 False 1176 mRNA 0.44 8 35488602 35495202

Neighbor

gene id symbol gene type direction distance location
LOC111195094 NA coding upstream 124850 35359733 ~ 35363752 (+)
exosc8 exosc8,LOC107577834,LOC107697412 coding upstream 211975 35270958 ~ 35276627 (+)
rfxap rfxap coding upstream 249177 35233840 ~ 35239425 (+)
sertm1 sertm1 coding upstream 255654 35222688 ~ 35232948 (+)
nbea nbeaa,nbea,LOC107691681 coding upstream 418279 34775714 ~ 35070323 (+)
LOC103023179 tmem120a,LOC108276692,LOC107728827,LOC107579123 coding downstream 3031 35498326 ~ 35504763 (+)
LOC103023494 LOC107577900,LOC108442441 coding downstream 22876 35518171 ~ 35541791 (+)
LOC103043521 adgrg2 coding downstream 62633 35557928 ~ 35596246 (+)
LOC103023820 NA coding downstream 112477 35607772 ~ 35618274 (+)
LOC111194993 NA coding downstream 126804 35622099 ~ 35629462 (+)
G181415 NA non-coding upstream 134 35484101 ~ 35488468 (+)
G181413 NA non-coding upstream 5980 35482286 ~ 35482622 (+)
G181408 NA non-coding upstream 16670 35470705 ~ 35471932 (+)
G181390 NA non-coding upstream 78238 35408580 ~ 35410364 (+)
G181372 NA non-coding upstream 163438 35324910 ~ 35325164 (+)
G181424 NA non-coding downstream 47053 35542348 ~ 35544216 (+)
G181439 NA non-coding downstream 134876 35630171 ~ 35631951 (+)
G181556 NA non-coding downstream 291806 35787101 ~ 35792691 (+)
G181586 NA non-coding downstream 365906 35861201 ~ 35901409 (+)
G181605 NA non-coding downstream 426450 35921745 ~ 35922340 (+)
nsun5 nsun5,LOC102793237,LOC107686168 other upstream 84978 35392521 ~ 35403624 (+)
LOC103024954 LOC108423745 other upstream 981278 34334576 ~ 34507324 (+)
LOC103026201 LOC108277347,LOC108423746,LOC106604019 other upstream 1159632 34172924 ~ 34328970 (+)
ufm1 ufm1,LOC107701138 other upstream 2420670 33050242 ~ 33067932 (+)
G180460 cct8,LOC100304907,LOC107693911,LOC107701129 other upstream 3214804 32264998 ~ 32273798 (+)
LOC107197592 NA other downstream 105188 35600483 ~ 35607593 (+)
LOC103044041 NA other downstream 189709 35685004 ~ 35702995 (+)
LOC103024766 zdhhc20a,LOC107589301,LOC107743391,LOC107686182,LOC107728865,LOC107697429,LOC108411113,LOC108276908 other downstream 320740 35816035 ~ 35842871 (+)
G181734 NA other downstream 711272 36206567 ~ 36209854 (+)

Expression


Co-expression Network