hint1 (hint1,LOC107665476)


Basic Information

Item Value
gene id hint1
gene name hint1,LOC107665476
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 25131225 ~ 25134155 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_015606675.2
AGCGGTCCTGCAGATACTGTTGAAGCCGCTGGACTCCGGACTGCTGCACTGCTCTCTGCCCAGCTCTGCAGTCCAGCCCTCGCCATGGCTGAGGAGGTGGCCAAGGCGCAGACCGCGCAGCCTGGAGGAGATACAATCTTCGGGAAAATAATTAGGAAAGAGATTCCGGCTAAAATAATCTACGAGGACGAGCAGtGTATAGCCTTCCATGATGTGGCCCCACAAGCTCCTACGCATTTTTTGGTAGTCCCAAGAAAACCCATTGTGCAGCTGTCAAAAGCAGAGGACGGTGATGCAGCActTCTTGGTCATTTGATGATTGTCGCCAAGAAGTGTGCAGAGCAGGTTGGCTTACCTAGAGGCTACCGGCTGGTTGTCAACGACGGCCCTGACGGTGGCCAGTCTGTTTATCACGTCCACCTTCATGTTCTCGGTGGCCGTCAGTTGGGCTGGCCTCCAGGCTAACTGCTCAAGTCTTGATCAACACGTAAAATGGCATCATTAGTCTCGGCACTAACTAAACAGTTGAGTCGTATGATTAACAGCAGATCGTTGTGCTAATTCTGTAATGTTATGTCAGTCTGTTACAAGGATACAGCAGGGAAAATCAATAAATGCACTTACCAACAATCA

Function

symbol description
hint1 Predicted to enable hydrolase activity. Predicted to be involved in purine ribonucleotide catabolic process. Predicted to be active in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in Gamstorp-Wohlfart syndrome. Orthologous to human HINT1 (histidine triad nucleotide binding protein 1).

NR:

description
histidine triad nucleotide-binding protein 1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K02503 HINT1, hinT, hit; histidine triad (HIT) family protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_015606675.2 True 633 mRNA 0.50 3 25131225 25134155

Neighbor

gene id symbol gene type direction distance location
chsy3 chsy3 coding upstream 4102 25055847 ~ 25127123 (+)
isoc1 isoc1 coding upstream 88305 25030961 ~ 25042920 (+)
LOC103037195 slc27a6,LOC108277201 coding upstream 114527 24983783 ~ 25016698 (+)
slc12a2 slc12a2,LOC107680742 coding upstream 314737 24762407 ~ 24816488 (+)
ctxn3 ctxn3,LOC107711251 coding upstream 391750 24726077 ~ 24739475 (+)
dact3 NA coding downstream 3738 25137893 ~ 25158281 (+)
dmpk dmpk coding downstream 45569 25179724 ~ 25203682 (+)
vasp LOC108423768,LOC107575450 coding downstream 81975 25216130 ~ 25235822 (+)
LOC103040246 LOC108444483 coding downstream 154452 25288607 ~ 25292893 (+)
proser1 proser1,LOC107556855 coding downstream 189193 25323348 ~ 25336596 (+)
LOC111195079 NA non-coding upstream 101551 25024143 ~ 25029674 (+)
G178938 NA non-coding upstream 107963 25023040 ~ 25023262 (+)
G178928 NA non-coding upstream 168701 24961298 ~ 24962524 (+)
G178896 NA non-coding upstream 313912 24795483 ~ 24817313 (+)
G178873 NA non-coding upstream 452562 24658407 ~ 24678663 (+)
G178981 NA non-coding downstream 85 25134240 ~ 25135395 (+)
G178985 NA non-coding downstream 1329 25135484 ~ 25135994 (+)
G178987 NA non-coding downstream 2595 25136750 ~ 25137219 (+)
G178998 NA non-coding downstream 33185 25167340 ~ 25168133 (+)
G179014 NA non-coding downstream 118369 25252524 ~ 25253549 (+)
LOC103032894 LOC108424565 other upstream 676603 24447792 ~ 24454622 (+)
G178485 NA other upstream 2166236 22963447 ~ 22964989 (+)
G178388 hmgcs1,LOC108427280,LOC108277226,LOC107737058 other upstream 2421668 22689001 ~ 22709557 (+)
G178352 NA other upstream 2585095 22544640 ~ 22546130 (+)
LOC103022948 hnrnpd,LOC108440733,LOC108276832,LOC107702593 other upstream 2629066 22493440 ~ 22502159 (+)
smpd1 smpd1,LOC107718723,LOC107720657,LOC107556869 other downstream 110006 25244161 ~ 25257469 (+)
LOC103024073 LOC108424537 other downstream 1696482 26830637 ~ 26879083 (+)
rnasek rnasek,LOC107554319 other downstream 1779595 26913750 ~ 26916344 (+)
LOC103038954 zgc:101846,LOC106525086,LOC108416226,LOC101161532 other downstream 2390147 27524302 ~ 27525441 (+)
G180235 erg other downstream 6005189 31139344 ~ 31151095 (+)

Expression


Co-expression Network