LOC111194974


Basic Information

Item Value
gene id LOC111194974
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 9660924 ~ 9662061 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022680691.1
TCTACCAGATGGATGTTTTAGACCAGCAAAACTTGACAGTTGAATACTGCTTTCCTGACAACAACTTATCTTGCACAAAGCAGGTCCATACAGGCCCTGCTTATACACTGTTATTCATTTTCCTCTCGTTTGTATGTTTATGTGCCGTGTTTTTTAATCTGCTGGTGATTATCTCCATGTCTCACTTCAAGCAGCTCCACACTCCAACCAACCTGCTCATCCTCTCTCTGGCTTTGGCAGATCTTCTTGTAGGAATATTTGTTATGCCTATAAATATAATGCAATTAAGTGATTCCTGCTGGTATCTTGGGAAAATTGTATGCTGTCTTTTTCCAGTAATCAGTAGCGTGTCTTTATCAGCATCTCTCTATAGCATGGCTTTTATTGCAGTTGATCGGTACATTGCTATCTGTGACCCTCTGCTTTATTCTGCTAGAGTCACAGTGTGCAGAACCAAACTGGCCCTCATTTTAGGCTGGTCATTTGCTGCATTCTATATAGCTATCATTTACTATTTTAGTGACCATCTTTTTCCATCTCAGATATCTTTTAAGTGTTATGGGGAGTGCGTGATCATAGTTAAATATTCCTGGATGATTGTTGATCTAGTGTTTTCATTTATCTGCCCGTGCTTTATTATAGTGATCTTATATTCACttatttttaaagcagcagtacgCCAGGCTAAAGCTGTCAGAGCTGTAGTGAATGCTGCCtcccaaagaaaaaaagtcaaaGTGGTCCCCAACTCCTCTGAAACCAAAGCAGCAAAAAAACTAGGCAGTATAATCTGCATTTATCTTGTTTGCTGGATAccgttttatttttcttgtctGTCAGTTGAAAGCTTGACCTCTTTATCAATGGTGTGGACTGTATTTACCTGGTTAATCTACATAAATTCCTCTGTGAACCCATTATTGTATGCTATATTCTATCCGTGGTTCCGAGCATCAGTGAAGTTTATTGTTACTTGTAAAATACTTGAATCCTCATCTTCAAGGCTTAATTTGTATAAAGAGCATTCTTTGCCTAATGCTTAGTTCCACTTCATTACTGTTATTTACCTCCATGGACAAAATGTATACTGCATTTTAATGTATACtgcacagaacaataaaaaatgtgttttcctaaA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022680691.1 True 1138 mRNA 0.38 1 9660924 9662061

Neighbor

gene id symbol gene type direction distance location
LOC103032234 NA coding upstream 14001 9645110 ~ 9646923 (+)
LOC111195020 NA coding upstream 18433 9641027 ~ 9642491 (+)
LOC111194972 NA coding upstream 33139 9626444 ~ 9627785 (+)
LOC103036148 gramd1ba,LOC107679517,LOC107730968,LOC108433258 coding upstream 162732 9354908 ~ 9498192 (+)
LOC103036746 LOC108433260,LOC105011014,LOC106567546,LOC108276559 coding upstream 347541 9206552 ~ 9313383 (+)
LOC111194975 NA coding downstream 3980 9666041 ~ 9667743 (+)
LOC111194976 NA coding downstream 12222 9674283 ~ 9675427 (+)
LOC107197516 NA coding downstream 18324 9680385 ~ 9681455 (+)
LOC111195100 NA coding downstream 21843 9683904 ~ 9685135 (+)
LOC111194977 NA coding downstream 29241 9691302 ~ 9692759 (+)
G174609 NA non-coding upstream 286976 9371441 ~ 9373948 (+)
G174582 NA non-coding upstream 339581 9319390 ~ 9321343 (+)
G174583 NA non-coding upstream 346786 9313904 ~ 9314138 (+)
LOC111195017 NA non-coding upstream 519626 9140149 ~ 9141298 (+)
G174559 NA non-coding upstream 566828 9092441 ~ 9094096 (+)
LOC111195021 NA non-coding downstream 98491 9760552 ~ 9762446 (+)
G174719 NA non-coding downstream 158050 9820111 ~ 9820433 (+)
G174738 NA non-coding downstream 560649 10222710 ~ 10223083 (+)
G174783 NA non-coding downstream 649132 10311193 ~ 10311590 (+)
G174788 NA non-coding downstream 673845 10335906 ~ 10336194 (+)
rexo2 NA other upstream 507791 9126708 ~ 9153133 (+)
LOC103038455 NA other upstream 1108314 8548884 ~ 8552610 (+)
acer3 acer3,LOC107653723,LOC107758701,LOC107680329,LOC107743427 other upstream 1494262 8149119 ~ 8166662 (+)
G174259 usp25 other upstream 1735484 7904595 ~ 7925440 (+)
LOC103041160 NA other upstream 3119545 6536327 ~ 6541379 (+)
LOC103028819 etf1,etf1b,LOC108437808,LOC107552075 other downstream 958967 10621028 ~ 10631765 (+)
G174874 LOC108437803 other downstream 1170107 10832168 ~ 11019418 (+)
G174994 NA other downstream 1767810 11429871 ~ 11436530 (+)
G175108 NA other downstream 2246811 11908872 ~ 11913456 (+)
LOC103027177 tmem261,LOC103027177 other downstream 2529295 12191356 ~ 12209449 (+)

Expression


Co-expression Network