LOC111194976


Basic Information

Item Value
gene id LOC111194976
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 9674283 ~ 9675427 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022680693.1
ATCAGGCTGCAACAGCCCCATTTGGCAGATATGGAGCCGATGGAGGTCAATAATACAGAGTTTAGGCATGCTATAGAAGTTCTGTACTGCTTCCCTGACCACAATATATCTTGCAGAAAGGAGGTCCGATCAGAccctgcatatatatttttgttcattttcctctcatgtatatctgtgtgtactgtgtttttgaacTTGTTGGTGAttatctccatctctcacttcaAGCAGCTCCACACTCCAACCAACCTGCTCATCCTCTCTCTGGCTGCAGCAGATCTTCTCGTGGGAATGTTTGTTATGCCTGTGAATATCATTCAATTAATGGACTCCTGCTGGTATCTTGGGAAGATGGCATGCAGTATTTTTAGTGTGGTCAATTTTCTTTCAATTTTAGCATCCCTCTGTAGTCTGACTTTCATTGCAGTTGATCGGTACATTGCTGTCTGTGACCCTCTGCTTTATTCTACTAGAGTGACAGCTTGTAAAACGTCTGTGTTCATAATCCTAGGCTGGTCTGTTGCTGCATTTTATGTTATTATGGTTTGCTACTTTAATGATCATCTTCTTCCATCTCAGATATCCAGTAGTTGTTATGGGGAGTGTGTACTGGCAATGAAGTATTCCTGGTTGATTGTTGACCTAGTGGTCTCATTCTTAACCCCTTGTTCTGTCATACTCGTCTTgtatttcatcatttttaaagtggcAATACGACAAGCTAAAGCTGtcagcactgaaaaaaatggcaCCTCCAACAATCATGGACCAGGTTCAAGTTCTTTTGAAACCaaagcagcaaaaaaattaGGCACAgtaatttttgtttatatttcttGCTGGATACCTTTTTATTTGTGCTCTGTGACAGTTGAAAACTTTACATCAGTGTCAATGGTTTGGACTGTATTTGGTTGGCTAATACTTATAAATTCATCTGTAAACCCTTTAATATATGGCATTTTTTACTCATGGTTCAGAAGCTCTTGTAAGTTTATTGTAACATGTAGAATATTTGAATCCTCATCTTCAAGGTTTAACTTGTTTCATGATCCTATTTAACATCCAATGATGTTCAGCTGTACATTTTCTGATATACCTAataatatctgttttttttcagataaactgtgtttataaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022680693.1 True 1145 mRNA 0.38 1 9674283 9675427

Neighbor

gene id symbol gene type direction distance location
LOC111194975 NA coding upstream 6540 9666041 ~ 9667743 (+)
LOC111194974 NA coding upstream 12222 9660924 ~ 9662061 (+)
LOC103032234 NA coding upstream 27360 9645110 ~ 9646923 (+)
LOC111195020 NA coding upstream 31792 9641027 ~ 9642491 (+)
LOC111194972 NA coding upstream 46498 9626444 ~ 9627785 (+)
LOC107197516 NA coding downstream 4958 9680385 ~ 9681455 (+)
LOC111195100 NA coding downstream 8477 9683904 ~ 9685135 (+)
LOC111194977 NA coding downstream 15875 9691302 ~ 9692759 (+)
LOC103034239 NA coding downstream 22956 9698383 ~ 9699826 (+)
LOC103030527 NA coding downstream 48127 9723554 ~ 9730991 (+)
G174609 NA non-coding upstream 300335 9371441 ~ 9373948 (+)
G174582 NA non-coding upstream 352940 9319390 ~ 9321343 (+)
G174583 NA non-coding upstream 360145 9313904 ~ 9314138 (+)
LOC111195017 NA non-coding upstream 532985 9140149 ~ 9141298 (+)
G174559 NA non-coding upstream 580187 9092441 ~ 9094096 (+)
LOC111195021 NA non-coding downstream 85125 9760552 ~ 9762446 (+)
G174719 NA non-coding downstream 144684 9820111 ~ 9820433 (+)
G174738 NA non-coding downstream 547283 10222710 ~ 10223083 (+)
G174783 NA non-coding downstream 635766 10311193 ~ 10311590 (+)
G174788 NA non-coding downstream 660479 10335906 ~ 10336194 (+)
rexo2 NA other upstream 521150 9126708 ~ 9153133 (+)
LOC103038455 NA other upstream 1121673 8548884 ~ 8552610 (+)
acer3 acer3,LOC107653723,LOC107758701,LOC107680329,LOC107743427 other upstream 1507621 8149119 ~ 8166662 (+)
G174259 usp25 other upstream 1748843 7904595 ~ 7925440 (+)
LOC103041160 NA other upstream 3132904 6536327 ~ 6541379 (+)
LOC103028819 etf1,etf1b,LOC108437808,LOC107552075 other downstream 945601 10621028 ~ 10631765 (+)
G174874 LOC108437803 other downstream 1156741 10832168 ~ 11019418 (+)
G174994 NA other downstream 1754444 11429871 ~ 11436530 (+)
G175108 NA other downstream 2233445 11908872 ~ 11913456 (+)
LOC103027177 tmem261,LOC103027177 other downstream 2515929 12191356 ~ 12209449 (+)

Expression


Co-expression Network