LOC111194985


Basic Information

Item Value
gene id LOC111194985
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 22970422 ~ 22973005 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022680703.1
TCTTGCTCGCACGCGCTCAAAAACTGCTataaaaaactctaaaattCTTACTAACTACTACTGTTTCTCCAGCTTTCTCCTCCAACTTTTTCTACAGGTTCTTTTTTGCCTCCACAGGTTACAGGCTTTCAATTTCATCAGGAAGACATCAGGAAAACACCAGGAACTCTTCCTTACCATCGGAGCCGCTTCCCGGGTTCATCAACAACATCTGTCCGTATTATGGACGGCGTCTGCGCCAGGACAGTCCCTAGACTGGCAGAccaggaggagaggaggagaggaaagaaGCGGTCCACCAGCCTGCTCTCACCCATGTCTCCTCCGGCCAAGAGGGCGAAGACCATCCGTGTTACGGACGGCGCCTGCGCAAGGACAGTCCCTAGACCGTCAGAccaggaggagaggagaagaggcAAGAAGAAGTCCACCAGCTTGCTCTCAACCATGTCTCCTCCAGccaagagggtgaagaccaTGAAGACTGAAGATGACAAGGATCCTGTGCACCTGGAACCACAGGCTGGCCCATCTTCCTTTTCTGGAAGGACCGGCATGCCTGCTGAGGCGGCGTCAGTCCAGGCCACCGGTGTAACCACACACAGGAGGGTTTTGGGGAGAGACACCACCTACGATCTGCACCGGATGTTGGGAGAGTTCCTCTGTCGTCGTTGCCACCGGATTCAGGACCTTGCCTGGACTGAGCCTGTGTTCTGGCTTCTCTCCGTGGACAGGCACTTGTACAGGACCCTCTGGCACCGTCGCCACTTCCTCTGTCGAGGCAGCTTGGTCTTCCTGTATATGGTGTGCGAAGACAGCATTTCAGCACAGATCGCCAGCAGACGGGAACTGAAGGCTGTGCTTCTCACATGCCTTTATGTGTCCTGTGCCTACGTGGGTCATTCCATCTCTTACCCTGCCATGCCCTTCATAGTGGAGAGCAACAGGATGGCCTTCTGGAGACGTGTCCTTGGAATCACCTCGCGCCTCAGTGCGAAGATGCTGCAGATTAACAACGACCCGCAGTATTTCGCCATGGTCTTTTCCGACTTGAAGAACAAGGAGGACCGCTGAAGGATCTGGTTGAGGAATCGTGCCTGGTGGAAATTTGGGCTGTTTTTAACATATGCGGCTGATACATTGTTATTGGATTAAATTGCCTAATGCCACATGGAACTGGTGACACTGAGCATGCATTACCGGTGCCAGTGGGGCTAGGTACGGTCTTAGTCACCAGGTAGGCTGATGTGGTGCTATGGTTATGAAGGTGTTAGTGGCTGACTGGGCAGGTAAGACTGGAAACCCAGCTGAGCGGGAAATTACTTggattttatttgtaatgtaacaacttgtaattgtaataggAGAATGTAGACACTGTTGACCACTGGCAGGGCAGTGGTGATGTCCTGACGAATGAGGGAATAGGAGCCTCAGTGCTCATAGTGTGCCATTGGTGGATAAATAGGAGGGGCAGCTTCAGTCACAGGTATAGAGACTGGAGCTGTTCCAGCAAGGCTGTCTTCAGGTAAGGGACAGAACCTTGCTGCTTTGGCTTTGTGGCATG

Function

GO:

id name namespace
GO:0045860 positive regulation of protein kinase activity biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022680703.1 True 1567 mRNA 0.52 2 22970422 22973005

Neighbor

gene id symbol gene type direction distance location
LOC111194992 NA coding upstream 3894 22964993 ~ 22966528 (+)
slc38a9 slc38a9,LOC107670042,LOC107564110,LOC107740785,LOC107566906,LOC107715861 coding upstream 42178 22908793 ~ 22928244 (+)
il6st NA coding upstream 90108 22865141 ~ 22880314 (+)
ankrd55 ankrd55,LOC107670032,LOC107737049,LOC107702571 coding upstream 107039 22839508 ~ 22863383 (+)
LOC111195066 NA coding upstream 442339 22519419 ~ 22528083 (+)
LOC103038592 LOC106571427,LOC108427269,LOC108276947 coding downstream 22084 22995089 ~ 23187224 (+)
fut10 fut10 coding downstream 230471 23203476 ~ 23217258 (+)
purg NA coding downstream 486363 23459368 ~ 23461975 (+)
LOC111188215 NA coding downstream 506532 23479537 ~ 23494300 (+)
LOC103034079 NA coding downstream 521149 23494154 ~ 23497618 (+)
G178482 sh2d4a non-coding upstream 13263 22950963 ~ 22957159 (+)
G178477 NA non-coding upstream 27073 22943126 ~ 22943349 (+)
G178474 NA non-coding upstream 28801 22935483 ~ 22941621 (+)
G178476 NA non-coding upstream 29273 22940604 ~ 22941149 (+)
G178472 NA non-coding upstream 39477 22930223 ~ 22930945 (+)
G178578 NA non-coding downstream 287566 23260571 ~ 23263280 (+)
LOC111195072 NA non-coding downstream 301444 23274449 ~ 23348016 (+)
G178614 NA non-coding downstream 424018 23397023 ~ 23397235 (+)
G178616 NA non-coding downstream 429965 23402970 ~ 23403734 (+)
G178617 NA non-coding downstream 438100 23411105 ~ 23418343 (+)
G178485 NA other upstream 5433 22963447 ~ 22964989 (+)
G178388 hmgcs1,LOC108427280,LOC108277226,LOC107737058 other upstream 260865 22689001 ~ 22709557 (+)
G178352 NA other upstream 424292 22544640 ~ 22546130 (+)
LOC103022948 hnrnpd,LOC108440733,LOC108276832,LOC107702593 other upstream 468263 22493440 ~ 22502159 (+)
hnrnpdl hnrnpdl,LOC107715891,LOC107702595,LOC107653490 other upstream 478919 22486823 ~ 22491503 (+)
LOC103032894 LOC108424565 other downstream 1474787 24447792 ~ 24454622 (+)
smpd1 smpd1,LOC107718723,LOC107720657,LOC107556869 other downstream 2271156 25244161 ~ 25257469 (+)
LOC103024073 LOC108424537 other downstream 3857632 26830637 ~ 26879083 (+)
rnasek rnasek,LOC107554319 other downstream 3940745 26913750 ~ 26916344 (+)
LOC103038954 zgc:101846,LOC106525086,LOC108416226,LOC101161532 other downstream 4551297 27524302 ~ 27525441 (+)

Expression


Co-expression Network