ovca2 (ovca2)


Basic Information

Item Value
gene id ovca2
gene name ovca2
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 35905684 ~ 35942719 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022680736.1
ATGAGGATGTTGGACGGCTACATTGTCCCATGTGATCACAAATGTCCTCAGGTTTCCTCCAACCTGATCCCCTTCAACTGCTGCTACCAGTCTCTGGGCACCACAAACTCCAGCCAAGCTCAGGAAGGGGCATTAGCCGATGTTCTGAGTTGGCCGCCACCCCAGGGTCTCCGCTGTCTCCCTGGTCTCCTGCAGGTCTGTGTGGCTCGGGCTCCTGCCACGATCAGAGTCTCAAATCTACAAGCATTTCATACCTCCAGGAGGAAGGACACGAACATCAGATCCAGAGGGTCTAAAGTGACCAAAGGGGGGATGTGGCTGAAGCGACCACCTTATATGCCCAGCTGGGACTCGTTAGTTCACAGAGCCCAGCTGAGCACCGCTCGGATGCAGCAGGTCGTGGCATGGGACTCCCAAGACCAGGAGAATTCCTCCAGTGCAGGTGATGAAGATCAGAGGGGCTGGTGGTTCTCTGATGTACAGGCACACAGTTTCGATGCGAGACAGGATTGTGAGAGCAGTCTGGGCCTGGACGAGAGTCTGGAGGCTGTGCGAGTGGCAGTGAAGGAGCTGGGCCCCTTTGATGGCATTCTGGGCTTTAGTCAGGGTGCTGCCCTGGTGGCCATGGTATGTGCCCTGCAGGAGCAAAAACTAGAGCCTGCTTTTAGCTTCCGCTTCGCTGTCCTGGTAGCAGGGTTCCGCAGCGCCTGTGCCCAGCATCAGCACTTCTATGAGGGCCTGGAGATCACCCTTCCCTCCCTGCACGTGTTTGGACAGGAAGACAAAGTGATCCCAGAGCAGATGAGTCGAGAGCTGCTGCCCACCTTCCCTGGAGCCCATATTCTCGTTCACCCAGGCGGACATTTTATCCCTGCTGCCTCTGCACATCGACAGACCTACCAAAAGTTCTTACAGATGTTTCAGTAGAAGGCGGATGAGCAGGGGCGAACAATTACAACAAATACTTTATGGATGCCTTTAATCTTTAAAATGGGAAATCAGGTATAATTAGAAAAATGTACAAACTTTAATTTAGAAGTTCATATTCTGCTAAATATATGTGTACCTGAAATGAAGTGAATGTCTTTATTtgtaaaactgaagaaaaaaacacgttaatatatctttgtttCTCAGATGTTTTCAGAACAAACTCATTTCTTGTTTCATTTTCTATTACTGTACTAATAAGCTTTTTATTTGATTCCTTTTTTAATGAGGCACTGTGCAGACACAGTaacaaaaacagcctgtttagGATTATTTTTGGATGGGAAATAATGGTAATTGCAAAAATACAATTTACgtatttatataataagacAATTAGTTCATTCAAAAGAATTACACCTGCTTATTAGTAGATGCATCTTAACACAgagttttatgtttaattttaaaacgaGTCGCATTGAACCGTTTTACACCAGTTAAGGTGATGCCACTGGTACCATGCTAaggtacttaaaaaaaaagtaagcacTGGAAGttctttagaaaaatgtgttaatttgaatctattaaaaaatatgtttgtttgtaatgcacccaaaacacatttatgcACATGCTATAGGTACGTAAACAGAGTTTGGTccgaccaaaagaggtggtcttggtccagATCTGGTTTTTCTGCAGTGTGAAGGCAGTTTTCTAGGTGGTTTGGACttttagaccaattacaggaagttgaggcagtctttaaacaaaccagagtaaAACAGAATTGGTGTTGTGCCGTAATCCGTCTCCCCTTGGTGTGGAGGTGCAACTTGCAGCAGTATGGACCCAAATGCTTAGACGGGgcttcatttatttactgtaacagtagattaacccttatttataaacagaaataaagggaaaCTGAGGATGTATACAGTGTAATGAAATGAAAAGACATTACTTTCTGGTCTGGACTTTTAAGTGTGAACACATGCCTGCACATTTCAACTCAGAATTTCTGCTgttccagaaaaaaacacatcaaatgtTTACCCGAAagcttattttaaaagtgtgttaAATATATAAGTTGGACTCAGTTTGTCCATGACACAGTCCACCCACAGTCTTCTACAGATTGAACTGATTTTTTGTCCCACAATTCTTAGGGTACAAAGAAATGAATAAAGGCCCATTTTAAAcaagtgta

Function

symbol description
ovca2 Predicted to enable thiolester hydrolase activity. Predicted to be involved in response to retinoic acid. Predicted to be active in cytoplasm and nucleus. Orthologous to human OVCA2 (OVCA2 serine hydrolase domain containing).

NR:

description
esterase OVCA2 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022680736.1 True 2158 mRNA 0.43 4 35905684 35942719

Neighbor

gene id symbol gene type direction distance location
smg6 NA coding downstream 32098 35846390 ~ 35873586 (-)
LOC103045257 LOC108411116 coding downstream 95013 35806732 ~ 35810671 (-)
LOC103044945 gabrr3,gabrr3a,LOC107589257,LOC107697425,LOC107686176,LOC106603079,LOC106563567 coding downstream 231520 35638005 ~ 35674164 (-)
rhbdd2 NA coding downstream 353496 35542319 ~ 35552188 (-)
prr11 NA coding downstream 417179 35480295 ~ 35488505 (-)
LOC111194994 atp6v0a1,LOC108444241,LOC107567567 coding upstream 303654 36246373 ~ 36253870 (-)
G181700 NA non-coding downstream 36716 35838820 ~ 35868968 (-)
G181686 NA non-coding downstream 78588 35798717 ~ 35827096 (-)
G181660 NA non-coding downstream 112762 35744785 ~ 35792922 (-)
G181680 NA non-coding downstream 113575 35790216 ~ 35792109 (-)
G181675 NA non-coding downstream 125164 35779981 ~ 35780520 (-)
G181735 NA non-coding upstream 263767 36206486 ~ 36209704 (-)
LOC103042595 LOC106931471,LOC106940241,LOC106603438,LOC107659943,LOC101067200 other downstream 434895 35433232 ~ 35470789 (-)
LOC103033173 NA other downstream 2050052 33805240 ~ 33855632 (-)
tiam1 tiam1,LOC108423828,LOC107718732 other downstream 3321341 32436325 ~ 32584343 (-)
tmem135 tmem135,LOC107701128,LOC107718730 other downstream 3643086 32240179 ~ 32262598 (-)
LOC103030555 LOC108423819,LOC107701125,LOC107718772,LOC107720543,LOC107556862,LOC107693906 other downstream 3833760 31894202 ~ 32071924 (-)

Expression


Co-expression Network