ash2l (ash2l,LOC107704134)


Basic Information

Item Value
gene id ash2l
gene name ash2l,LOC107704134
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 2056365 ~ 2073303 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022680869.1
GAGATTTCCGACGTGATTTCGTTTTTAAACATGGCTTCTGAGAGCGAGGCGGGCGGTGTGTCTGTGGCTGAGGGAGACACAGGGGAAGGAGATGCTTCATTTGGAGATCTAACAGCGAACATGGAAACAGAATCCGGCAACAGCAAGGAGGCCATGGATGCAGCCGGTGATGGTGCTGAGGCTGGAGATGCACAGACTGGTTCAGGAGATGAGGAGAGTGGACGGCAGCTGGGCGAGGTGGAGCTGCAGTGTGCGCTGTGCATGAAGTGGTTCACCGCCGATACGTTCAGCATCGATACTGCAACTTGCCTTCCCTTTATGACCAATTATGTGTTCCACTGCAACGTCTGTCATCACAGTGGAAATACATACTTTCTAAGGAAACAAGCAAACTTGAAAGAGATGTGCCTCACAGCTTTGGCTAATCTGACGTGGAGGTCAAGGACTCAAGAGGAGCACCCCAAGACCATGTTTTCTAAAGACAAGGATATCATACCTTTCATTGATAAGTACTGGGAGTGCATGACGACCCGTCAGAGACCGGGGAAGCTAACATGGCCGAACAACATTGTAAAAACCATGAGTAAAGAGCGAGACGTGTTCCTGGTGAAGGAGCATCCTGACCCTGGCAGTAAAGATCCTGAGGAGGAATACCCCAAGTTTGGCCTTCTTGATCAGGATTTGGCCAATATTGGACCTTCATATGACAACCAAAAGCAAACTACTACAGTCACAGCTGCAGGAAATCTCAACGGTGGATCTTCGTTTTCAGGTGGTCTTCCACCTCCCAGCACGGGGAAAGGCCGAGGAGCCAAAcgcaaacagcagcagcagcaggacggAGCCAGCGCTGGAGCAGCCAAGAGGACCCGCAGTGATCCTCTGTTCTCAGCCCAGCGTCTGCCTCCTCACGGATACCCCCTGGAGCATCCCTTCAACAAGGACGGCTATCGGTACATCTTGGCCGAGCCGGACCCCCACGCCCCCGACCCAGAGAAGCTGGAGTTGGACTGCTGGGCCGGAAAACCCATCCCTGGAGATTTATACAGGGCCTGTCTGTATGAGAGAGTGCTGCTAGCCCTGCATGACCGAGCTCCCCAGCTGAAGATCTCTGATGACCGTCTCACTGTGACCGGAGAGAAGGGCTACTCGATGGTTCGGGCCTCTCATGGAGTTCGGAAGGGATCCTGGTATTTCGAGGTGACTGTAGACGAAATGCCCCCTGAAACTGCGGCTCGACTCGGCTGGTCGCAGCCTTTAGGTAACCTACAGGCTCCACTGGGCTACGATAAGTTCAGCTACTCCTGGCGCAGTAAGAAGGGCACCCGCTTCCACCAGTCCATCGGGAAGCATTACTCTGATGGCTACGGGCAGGGAGACATCCTGGGCTTCTTCATTGAGCTTCCAGATGGTACAGAAATCGCCAGGTCCTTACCGGATACATACAAGGACAAAGCACTGATCAAATTCAAAAGCTACCTCTACTTTGAAGAGAAGGATTACGTGGACAAGGCAGAAAAGAACCTGAAGCCAGTTAGTGAGAGCCGAatgatTTTTTACAAGAATGGAAAGAGCCAGGGCGTGGCGTACGACAACCTGTTTGAGGGAATGTATTTCCCTGCTATATCTCTCTACAAGAGCTGCACGGTATCCGTTAATTTTGGGCCACATTTCAAATACCCTCCAAAGGATGTCAAGTTCCAGCCAATGAGTGATATGGGCTGGGGTGCAGTGATTGAGCACAGCCTGGCGGATATTCTTTACCACGTGGAGACGGATGTGGACGGCCGGCGCAGTCCTCCGTGGGAGGGTTAAATTTCTTCAAGTGTAAATTCAGTGTGATGCAAAGCCACAACCCATTCAAGCTAATTCACCATCACATCTCACAGTGTCCTCATACAACACGTCCAACACATACGTGATCCTACACATCCTACACACAGCCCAGAGTCACAATATTTCATATCCAGTGATGTAACTCATAGATGAGCAAAACTGAAGGATTTCTCAGTATTTTTGAGAGTGTGAACTCTTCTGAATGCTTCTCGTTCAGTGcagacatttagagcatttctccAGGTACACTTATCTTCAGAACTGTATCATTTATGGTTAAACTAGTTTAAGAAAAGTCTGAGAAACTTGAattaatttagcaaaaaaatctgacctgaaacattgaaacatatataataagtGTTAAAATATACTACGCAAAGTTTCATGCCGTCGTTTCCTTTGCACCTCGTACATTTTGGGGTATAATCGGGTTCAGACTAGTCCAAATCCTAGAAATAGTAGCAAATAAATGGGGTTTCTGTTCAGTTTTCATTCAgttctctctcttgtttcttGTGTTTCTTCTTTGTGAGATAGTGGTTCAGCTGTTCTTTTTagttgtaaaaaataattaatttgatcatttgacatgttttcattttattaagcCTTGTTTTTTACTGAAGCTTGTTTTAATAAAGCTATTCTGAGAGAAAA
>XM_022680870.1
GAGATTTCCGACGTGATTTCGTTTTTAAACATGGCTTCTGAGAGCGAGGCGGGCGGTGTGTCTGTGGCTGAGGGAGACACAGGGGAAGGAGATGCTTCATTTGGAGATCTAACAGCGAACATGGAAACAGAATCCGGCAACAGCAAGGAGGCCATGGATGCAGCCGGTGATGGTGCTGAGGCTGGAGATGCACAGACTGGTTCAGGAGATGAGGAGAGTGGACGGCAGCTGGGCGAGGTGGAGCTGCAGTGTGCGCTGTGCATGAAGTGGTTCACCGCCGATACGTTCAGCATCGATACTGCAACTTGCCTTCCCTTTATGACCAATTATGTGTTCCACTGCAACGTCTGTCATCACAGTGGAAATACATACTTTCTAAGGAAACAAGCAAACTTGAAAGAGATGTGCCTCACAGCTTTGGCTAATCTGACGTGGAGGTCAAGGACTCAAGAGGAGCACCCCAAGACCATGTTTTCTAAAGACAAGGATATCATACCTTTCATTGATAAGTACTGGGAGTGCATGACGACCCGTCAGAGACCGGGGAAGCTAACATGGCCGAACAACATTGTAAAAACCATGAGTAAAGAGCGAGACGTGTTCCTGGTGAAGGAGCATCCTGACCCTGGCAGTAAAGATCCTGAGGAGGAATACCCCAAGTTTGGCCTTCTTGATCAGGATTTGGCCAATATTGGACCTTCATATGACAACCAAAAGCAAACTACTACAGTCACAGCTGCAGGAAATCTCAACGGTGGTCTTCCACCTCCCAGCACGGGGAAAGGCCGAGGAGCCAAAcgcaaacagcagcagcagcaggacggAGCCAGCGCTGGAGCAGCCAAGAGGACCCGCAGTGATCCTCTGTTCTCAGCCCAGCGTCTGCCTCCTCACGGATACCCCCTGGAGCATCCCTTCAACAAGGACGGCTATCGGTACATCTTGGCCGAGCCGGACCCCCACGCCCCCGACCCAGAGAAGCTGGAGTTGGACTGCTGGGCCGGAAAACCCATCCCTGGAGATTTATACAGGGCCTGTCTGTATGAGAGAGTGCTGCTAGCCCTGCATGACCGAGCTCCCCAGCTGAAGATCTCTGATGACCGTCTCACTGTGACCGGAGAGAAGGGCTACTCGATGGTTCGGGCCTCTCATGGAGTTCGGAAGGGATCCTGGTATTTCGAGGTGACTGTAGACGAAATGCCCCCTGAAACTGCGGCTCGACTCGGCTGGTCGCAGCCTTTAGGTAACCTACAGGCTCCACTGGGCTACGATAAGTTCAGCTACTCCTGGCGCAGTAAGAAGGGCACCCGCTTCCACCAGTCCATCGGGAAGCATTACTCTGATGGCTACGGGCAGGGAGACATCCTGGGCTTCTTCATTGAGCTTCCAGATGGTACAGAAATCGCCAGGTCCTTACCGGATACATACAAGGACAAAGCACTGATCAAATTCAAAAGCTACCTCTACTTTGAAGAGAAGGATTACGTGGACAAGGCAGAAAAGAACCTGAAGCCAGTTAGTGAGAGCCGAatgatTTTTTACAAGAATGGAAAGAGCCAGGGCGTGGCGTACGACAACCTGTTTGAGGGAATGTATTTCCCTGCTATATCTCTCTACAAGAGCTGCACGGTATCCGTTAATTTTGGGCCACATTTCAAATACCCTCCAAAGGATGTCAAGTTCCAGCCAATGAGTGATATGGGCTGGGGTGCAGTGATTGAGCACAGCCTGGCGGATATTCTTTACCACGTGGAGACGGATGTGGACGGCCGGCGCAGTCCTCCGTGGGAGGGTTAAATTTCTTCAAGTGTAAATTCAGTGTGATGCAAAGCCACAACCCATTCAAGCTAATTCACCATCACATCTCACAGTGTCCTCATACAACACGTCCAACACATACGTGATCCTACACATCCTACACACAGCCCAGAGTCACAATATTTCATATCCAGTGATGTAACTCATAGATGAGCAAAACTGAAGGATTTCTCAGTATTTTTGAGAGTGTGAACTCTTCTGAATGCTTCTCGTTCAGTGcagacatttagagcatttctccAGGTACACTTATCTTCAGAACTGTATCATTTATGGTTAAACTAGTTTAAGAAAAGTCTGAGAAACTTGAattaatttagcaaaaaaatctgacctgaaacattgaaacatatataataagtGTTAAAATATACTACGCAAAGTTTCATGCCGTCGTTTCCTTTGCACCTCGTACATTTTGGGGTATAATCGGGTTCAGACTAGTCCAAATCCTAGAAATAGTAGCAAATAAATGGGGTTTCTGTTCAGTTTTCATTCAgttctctctcttgtttcttGTGTTTCTTCTTTGTGAGATAGTGGTTCAGCTGTTCTTTTTagttgtaaaaaataattaatttgatcatttgacatgttttcattttattaagcCTTGTTTTTTACTGAAGCTTGTTTTAATAAAGCTATTCTGAGAGAAAA
>XM_022680871.1
TCCATGTTCTTGCTGTTTTAGAGGGAAATCCGCGGGTCTGCAGAGATGCTTCATTTGGAGATCTAACAGCGAACATGGAAACAGAATCCGGCAACAGCAAGGAGGCCATGGATGCAGCCGGTGATGGTGCTGAGGCTGGAGATGCACAGACTGGTTCAGGAGATGAGGAGAGTGGACGGCAGCTGGGCGAGGTGGAGCTGCAGTGTGCGCTGTGCATGAAGTGGTTCACCGCCGATACGTTCAGCATCGATACTGCAACTTGCCTTCCCTTTATGACCAATTATGTGTTCCACTGCAACGTCTGTCATCACAGTGGAAATACATACTTTCTAAGGAAACAAGCAAACTTGAAAGAGATGTGCCTCACAGCTTTGGCTAATCTGACGTGGAGGTCAAGGACTCAAGAGGAGCACCCCAAGACCATGTTTTCTAAAGACAAGGATATCATACCTTTCATTGATAAGTACTGGGAGTGCATGACGACCCGTCAGAGACCGGGGAAGCTAACATGGCCGAACAACATTGTAAAAACCATGAGTAAAGAGCGAGACGTGTTCCTGGTGAAGGAGCATCCTGACCCTGGCAGTAAAGATCCTGAGGAGGAATACCCCAAGTTTGGCCTTCTTGATCAGGATTTGGCCAATATTGGACCTTCATATGACAACCAAAAGCAAACTACTACAGTCACAGCTGCAGGAAATCTCAACGGTGGATCTTCGTTTTCAGGTGGTCTTCCACCTCCCAGCACGGGGAAAGGCCGAGGAGCCAAAcgcaaacagcagcagcagcaggacggAGCCAGCGCTGGAGCAGCCAAGAGGACCCGCAGTGATCCTCTGTTCTCAGCCCAGCGTCTGCCTCCTCACGGATACCCCCTGGAGCATCCCTTCAACAAGGACGGCTATCGGTACATCTTGGCCGAGCCGGACCCCCACGCCCCCGACCCAGAGAAGCTGGAGTTGGACTGCTGGGCCGGAAAACCCATCCCTGGAGATTTATACAGGGCCTGTCTGTATGAGAGAGTGCTGCTAGCCCTGCATGACCGAGCTCCCCAGCTGAAGATCTCTGATGACCGTCTCACTGTGACCGGAGAGAAGGGCTACTCGATGGTTCGGGCCTCTCATGGAGTTCGGAAGGGATCCTGGTATTTCGAGGTGACTGTAGACGAAATGCCCCCTGAAACTGCGGCTCGACTCGGCTGGTCGCAGCCTTTAGGTAACCTACAGGCTCCACTGGGCTACGATAAGTTCAGCTACTCCTGGCGCAGTAAGAAGGGCACCCGCTTCCACCAGTCCATCGGGAAGCATTACTCTGATGGCTACGGGCAGGGAGACATCCTGGGCTTCTTCATTGAGCTTCCAGATGGTACAGAAATCGCCAGGTCCTTACCGGATACATACAAGGACAAAGCACTGATCAAATTCAAAAGCTACCTCTACTTTGAAGAGAAGGATTACGTGGACAAGGCAGAAAAGAACCTGAAGCCAGTTAGTGAGAGCCGAatgatTTTTTACAAGAATGGAAAGAGCCAGGGCGTGGCGTACGACAACCTGTTTGAGGGAATGTATTTCCCTGCTATATCTCTCTACAAGAGCTGCACGGTATCCGTTAATTTTGGGCCACATTTCAAATACCCTCCAAAGGATGTCAAGTTCCAGCCAATGAGTGATATGGGCTGGGGTGCAGTGATTGAGCACAGCCTGGCGGATATTCTTTACCACGTGGAGACGGATGTGGACGGCCGGCGCAGTCCTCCGTGGGAGGGTTAAATTTCTTCAAGTGTAAATTCAGTGTGATGCAAAGCCACAACCCATTCAAGCTAATTCACCATCACATCTCACAGTGTCCTCATACAACACGTCCAACACATACGTGATCCTACACATCCTACACACAGCCCAGAGTCACAATATTTCATATCCAGTGATGTAACTCATAGATGAGCAAAACTGAAGGATTTCTCAGTATTTTTGAGAGTGTGAACTCTTCTGAATGCTTCTCGTTCAGTGcagacatttagagcatttctccAGGTACACTTATCTTCAGAACTGTATCATTTATGGTTAAACTAGTTTAAGAAAAGTCTGAGAAACTTGAattaatttagcaaaaaaatctgacctgaaacattgaaacatatataataagtGTTAAAATATACTACGCAAAGTTTCATGCCGTCGTTTCCTTTGCACCTCGTACATTTTGGGGTATAATCGGGTTCAGACTAGTCCAAATCCTAGAAATAGTAGCAAATAAATGGGGTTTCTGTTCAGTTTTCATTCAgttctctctcttgtttcttGTGTTTCTTCTTTGTGAGATAGTGGTTCAGCTGTTCTTTTTagttgtaaaaaataattaatttgatcatttgacatgttttcattttattaagcCTTGTTTTTTACTGAAGCTTGTTTTAATAAAGCTATTCTGAGAGAAAA

Function

symbol description
ash2l Predicted to enable transcription cis-regulatory region binding activity. Acts upstream of or within hematopoietic progenitor cell differentiation and primitive erythrocyte differentiation. Predicted to be part of Set1C/COMPASS complex. Orthologous to human ASH2L (ASH2 like, histone lysine methyltransferase complex subunit).

NR:

description
PREDICTED: set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X1

GO: NA

KEGG:

id description
K14964 ASH2; Set1/Ash2 histone methyltransferase complex subunit ASH2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022680869.1 True 2496 mRNA 0.48 17 2061315 2073303
XM_022680870.1 False 2478 mRNA 0.48 16 2061315 2073303
XM_022680871.1 False 2450 mRNA 0.47 17 2056365 2073303

Neighbor

gene id symbol gene type direction distance location
ddx56 ddx56 coding upstream 37626 2009660 ~ 2018739 (+)
LOC103032544 NA coding upstream 63033 1990765 ~ 1993332 (+)
polm polm coding upstream 75231 1974245 ~ 1981134 (+)
LOC111194965 mrps24 coding upstream 94751 1959085 ~ 1961614 (+)
LOC103042387 LOC108410540 coding upstream 289440 1760477 ~ 1766925 (+)
mier3 mier3,mier3a,LOC108441071,LOC108277354,LOC107568605,LOC107665797 coding downstream 21259 2094562 ~ 2103944 (+)
pdxp pdxp coding downstream 37685 2110988 ~ 2115322 (+)
LOC103035434 LOC103035434,LOC108441064,LOC108277206,LOC557306,LOC107687378,LOC107568610,LOC107665788 coding downstream 142715 2216018 ~ 2232907 (+)
epb41l4a epb41l4a,LOC107653778,LOC107709672,LOC107692020 coding downstream 760938 2834241 ~ 2897371 (+)
LOC103033517 srsf9,LOC107560829 coding downstream 857752 2931055 ~ 2936876 (+)
G172782 NA non-coding upstream 12426 2042725 ~ 2043939 (+)
G172767 NA non-coding upstream 33545 1987991 ~ 2022820 (+)
G172763 NA non-coding upstream 51940 1999389 ~ 2004425 (+)
G172756 NA non-coding upstream 91761 1962721 ~ 1964604 (+)
G172741 NA non-coding upstream 144640 1904782 ~ 1911725 (+)
G172789 LOC108441067 non-coding downstream 52251 2125554 ~ 2130319 (+)
G172800 NA non-coding downstream 65336 2138639 ~ 2227606 (+)
G172898 NA non-coding downstream 434178 2507481 ~ 2507692 (+)
G172899 NA non-coding downstream 508107 2581410 ~ 2581838 (+)
G172903 NA non-coding downstream 539923 2613226 ~ 2613513 (+)
G172770 h2afvb,h2afva,LOC107386217,LOC105007341,LOC107668744,LOC107599604,LOC103039302 other upstream 59003 1994708 ~ 1997362 (+)
G172725 ogdh,LOC107554543,LOC107714098,LOC107656768 other upstream 200611 1853282 ~ 1855754 (+)
LOC103041266 NA other upstream 206149 1839351 ~ 1850216 (+)
G172552 NA other upstream 427560 1626799 ~ 1628805 (+)
G172517 NA other upstream 514214 1507320 ~ 1542151 (+)
LOC103031931 LOC103031931,LOC108435131,LOC104953549 other downstream 645306 2718609 ~ 2726076 (+)
unc5c unc5c,LOC108435138,LOC108277026,LOC105911728,LOC106564027,LOC105025160,LOC106568183 other downstream 1391830 3465133 ~ 3739736 (+)
G173094 NA other downstream 1666999 3740302 ~ 3743205 (+)
G173111 LOC108435134,LOC108277016 other downstream 1835639 3908942 ~ 3931991 (+)
gdnf gdnf,LOC107653769,LOC107752627,LOC107692037,LOC107569368,LOC107727951 other downstream 2044731 4118034 ~ 4130482 (+)

Expression


Co-expression Network