G69562


Basic Information

Item Value
gene id G69562
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 1332075 ~ 1376298 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU79336
TGGAAATGCGAAAATCCAAATTTCAAAATTTAAGCCTTTTCTAAAATGTGCCCATGTTCTTGATGAACTGACCTGTTTTTGCGATTATTCCCCAAGCCACAATCTTGCCCACTTCAGATAAAGAGCTAAACTGCTATAAGAGCTGCTTTCTCAATATCTGACAGACTGTAATATTACAGCTCCATCTAGTGGCAGTCTGCAAAACATCATTTCTAAATAAGGAGAATATTTTGGTATTCGGTGCTTGACTGAAATGAAATGATTGTCCAGTTTGCTCATTATTATTATTATAGGCTAAACTGACTCTAGAGCAGAAACACTCCTGGCTCTCACCTTGGTCTGAAAGCAGCAGTAGAGTTGGGTAAGGTAAGGGTGTTTTCTGGCCAGGGCTAGAATGCGTTTCTCAGTCATAGTGCAGTCCACATCATCATCCTGTAGGATGACGTCTTTCTTCAACACTTTCACCGCAAAAACCTCATCAGTGCCTCTTAACTCAGCCAGCATCACCTTGCCGAAGCTGCCTTTCCCGAGCACTTTGATGAAGGAGAAGTCTTCCAGCGTCATCCTTTTGGTCTGGAGGGTCTTCACCTCTCCATTCTCTCTCGCCTCCCCCGTCTCCTCTGACCCTCCCTCAGTTAGAGAGGAGGACGAGGCTGGCTTTAGCTCTTCACCACGATGGTCAAACGAAAGTGCCTTCCTGATGTTCTCCAGGTCCTTT
>TU79337
CAAAGTCTGCCAGCTTACAGTGACCTTCTGCGTCCAACAGAATGTTGTCTAGTTTTAAATCCCTGTAAATGACCCCATTTTGGTGCAGAAACATGAGGGCCGAGGTCACCTCAGCAGCGTAGAACCGGGAACGAGCTTCATCGAATTTGCGTGAACGCTGGATCTGGAACATCAGGTCTCCGCCATTCACATATTCCATGACGAAGAACAAACGGTCCTTGGTCTGAAAGCAGCAGTAGAGTTGGGTAAGGTAAGGGTGTTTTCTGGCCAGGGCTAGAATGCGTTTCTCAGTCATAGTGCAGTCCACATCATCATCCTGTAGGATGACGTCTTTCTTCAACACTTTCACCGCAAAAACCTCATCAGTGCCTCTTAACTCAGCCAGCATCACCTTGCCGAAGCTGCCTTTCCCGAGCACTTTGATGAAGGAGAAGTCTTCCAGCGTCATCCTTTTGGTCTGGAGGGTCTTCACCTCTCCATTCTCTCTCGCCTCCCCCGTCTCCTCTGACCCTCCCTCAGTTAGAGAGGAGGACGAGGCTGGCTTTAGCTCTTCACCACGATGGTCAAACGAAAGTGCCTTCCTGATGTTCTCCAGGTCCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79336 False 718 TUCP 0.45 2 1332075 1332901
TU79337 True 602 TUCP 0.50 4 1332075 1376298

Neighbor

gene id symbol gene type direction distance location
CI01000012_01256938_01257273 PRKCE coding downstream 74802 1255717 ~ 1257273 (-)
CI01000012_01240945_01242653 SOCS5, SOCS5B coding downstream 89422 1240517 ~ 1242653 (-)
CI01000012_01203854_01208893 NA coding downstream 123182 1203452 ~ 1208893 (-)
CI01000012_01139864_01192154 TTC7A coding downstream 139921 1135676 ~ 1192154 (-)
CI01000012_01032204_01034843 NA coding downstream 297232 1031969 ~ 1034843 (-)
CI01000012_01489297_01490202 CDC42EP3 coding upstream 112532 1488830 ~ 1490313 (-)
CI01000012_01601665_01604244 CYP1B1 coding upstream 225356 1601654 ~ 1604353 (-)
CI01000012_01677949_01691893 POLR1B coding upstream 301606 1677904 ~ 1692036 (-)
CI01000012_02239088_02240850 NA coding upstream 862102 2238400 ~ 2240862 (-)
CI01000012_02251322_02337964 PRKG1A, PRKG1, PRKG1B coding upstream 874839 2251137 ~ 2339368 (-)
G69517 NA non-coding downstream 1567 1324916 ~ 1330508 (-)
G69509 NA non-coding downstream 114319 1217451 ~ 1217756 (-)
G69508 NA non-coding downstream 115403 1216436 ~ 1216672 (-)
G69498 NA non-coding downstream 126662 1205175 ~ 1205413 (-)
G69497 NA non-coding downstream 127536 1204309 ~ 1204539 (-)
G69641 NA non-coding upstream 128250 1504548 ~ 1504754 (-)
G69647 NA non-coding upstream 143795 1520093 ~ 1520388 (-)
G69696 NA non-coding upstream 218555 1594853 ~ 1595294 (-)
G69700 NA non-coding upstream 221630 1597928 ~ 1598157 (-)
G69720 NA non-coding upstream 279182 1655480 ~ 1655779 (-)
G69332 NA other downstream 556196 775364 ~ 775879 (-)
G69277 NA other downstream 601610 729920 ~ 730465 (-)
G69161 NA other downstream 744060 587604 ~ 588015 (-)
G69150 NA other downstream 765119 565463 ~ 566956 (-)
G70774 NA other upstream 1490210 2866508 ~ 2866892 (-)
G71898 NA other upstream 3157232 4533530 ~ 4534672 (-)
G72068 NA other upstream 3399922 4776220 ~ 4780132 (-)
G72204 NA other upstream 3917475 5293773 ~ 5302206 (-)
CI01000012_05414096_05416676 TTC9 other upstream 3987344 5413369 ~ 5416780 (-)

Expression


Co-expression Network