il6st


Basic Information

Item Value
gene id il6st
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 22865141 ~ 22880314 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022681258.1
ATCGCATAACTTGACGCAACATTACGTCCGGCTGTGGCAACTCGAGCGAAGGAATTGGTGCAGATGCCTGAGTGAGTAAGTGCGGATCGCGCAGATTATATCACGATGGATTAAAAACTAAGGGGAGGAGATAATTAGACGTTTAGACGTTATTAAGACTTCCTAAAACATTTCCTACAGACGTTTGAAGTTTATAAGTTACTAAACAAGACGAGTCAGTGAACATGTATTGAAGAAAAGCGCCTGGACCGTCCCAAGGTGCTGGCAATAAATATTGCAATGGGTACTTCACTACAACGATTACCGCTCATCTTCTGCATATTCTTCAGCTTTGCAGTCGGTTGCATTCATATACCTAAAATATACCCAGACTCTACTGAAAAGATTCCAGTTGAACTGGGGAAGGAATTCACTGCTACCTGTGTGCTAAACAAAGGTTCAAAGTACAGTGCAGATGACATCGAATGGTTGTTTGGAGATGTTCCTGTTCCTCGGGAGTTTTATaagaaaataaaccaatcagctgtTGCTGTTACTGTAAATATCAGTGCCGATATAAAAAGCCCATTAAAATGTAAGGCCTCCAAACAATCGCTGTCATATGAACAGCCATGTATGTATGGGATATACCTTTTAATGGGATATCCCCCATTAAAGCCAAAGAATCTGACATGCATAGCGCTTCAAGATGGTAAAAGGATATCACCCAATTTTACATGTTCATGGGATCCAGGGACCAGAGATCCACTCCTTCCCACCACCTATATTCTCTATGCAGGGGAACACAGTTCTAATAGTACCAAGACTCTCACTAACAAACTCACCGTCAATTTAAGCACTTTCCCAAATTTTATGACCATGGATATTAAGTTGGAAGTGAGGAATGTCTTGGGAAAAGAAATTGTAGAACTACAGATCTATTCACAAAAGTTTGTAAAACCAAATCCACCATCAAATGTGAGGATAATTCCGGAAAACAACTTTCCAACGTCTTTAATGGTGAACTGGACTCCTCCCATCCATGAATCAGTTTTAGAACTTAAATACCACATCAGATACTGCAAAGCAGGCGCCAGCGCTTGGACAGAGgtaAGCCAGGATGCCACTAAAGCTTACACAGAGTCCTTCAGACTTCAGTCTCTTCAGCCACACACTGAGTATGTGGTTCAGATGCGCTGCATTCAGCGTGAGAACGTTGGTTACTGGAGTGATTGGAGTTCAAACGCGACTGCTCGTACCCCAGAAGCGGctcctAAAAGTGAACCAGATTTGTGGAGAGTTTTTGGAGATGATGAGACAGATGTAAAACTGATTTGGAAGGAACCTGTGAAGGCCAATGGAAAAATACTAGAATATGACCTCTTCATTGAGGAAAGGGGAATCGCGCCTCAGAGGCTCGTGGTTGCTTCTAAAGAGCACCAGTACCATTTAAAGGGGGAAAACGCTTTTATCAATATGACTGCCAACAATTCTGCCGGGGTCTCTCCTCTGACCACTTTAGTGATCTCAAGACCTGATCTGAatCCTTATCCTGGAGTAGCCTACGTTAGTTGCTCCGTCCGTGACGGGAAGCTGTGGGTGGAATGGCTTCCACCCAAAGAATCCAGCATACGTGTCCACAAGTACTTGGTGGAATGGGTGTCGGTTCAAGAAAACAAGAGGGACTGGCAGAGAGTGTCAGGCAATACGAGGACAGTCATTATAGGTAACCTCGAGCCATTCAAGCGCTACAATGTATCCGTCTATCCGATTTATCGAGTTGGAGACAGAGTTAAGTACAACTGGCCAGGTAGAAGTGTTGGAGCTGTGGGAGCTTATCTCCAAGAAGGACCTCCTCTGAAAGGTCCTGCTGTTGATGTGACTAACACACAGAAGAATAGTGCTTCTTTACAATGGGAGGAGATTCCAATTTCCAGCCAGCGGGGATTTCTCACCAATTACACCATCTTCTATAAAACAGGAGACAATGAGCAATCTGTTGTGGTGGATAGCAGTTTCCTCTCCTACAAGCTGACAGGACTGGAGAGTGAAAGTCAGTACGTGGTGCACATCATGGTCAATGCGGAGGGCTCAGTAAACGGCTCTGATTCCAGTTTGTACACTAAGAAGTATGACGATGGTGAAATCGAGGTGATCGTTGTGCTGGTGTGCTTGGGCTTCCTGTTCTTCATAGTTTTCATAATGATGCTCTCCATCAAGAACAGAGAAGTGATTAAGAAGCGTTTATGGCCACAAGTTCCAGACCCCTCCCACAGCACTCTTGCTACCTGGTCACCTGACTGTCCCGTTAGGACGGACACTCCAAAAGAAGCCACGCTGCCCGACGTGAGCGTTGTGGAGGTGGACATATTTGATGGAAAGTCTTTATGTGAGGAGGATAAGACCATGCTCCCGCTGAAGAAGGACAAGTATTTCTCAGAGGAGCACAGCAGCGGCATCGGCGGCTCGTCCTGCATGTCCTCCCCGCGGCAGAGCGTTTCCGACAGCGACGAGGGCGACTCCGGCCAGACCACCGCCAGCACGGTGCAGTACTCCTCGGTGGTGGCCAGCGGCTATAAGGGTCAGACCCCCAGCCTGCAAGCCCCCAACTTCATCCGGTCTGAGTCCACACAGCCTCTCCTGGACTGTGAGGAGCAACCAGAGAGTGTActggacagcagcagcagcagcagcccccaGAGAAACTCTTACTTCAGACGAGGCGCAGGCCTGGAGCAGCTGCAGCCGCAGGAGGTCGAGGAGACGAGCTGCTTCAGTCCAATGGAGGAAGAGGACACGCCCACGCTCACAGAGGATCCTCCAGGCCCCGCCCCCGGGTACATGCCGCAGCAGAACGGCTACCGGCCCCAGTGAGAGAGCAGGACATGGACATTGACAGCTGATAAATCTCAGTGTTAACACAACCCTGTGCCTTCATTTATTGACCCAACGTAACTTAATGGCCGTTTTAAGGCTGAATATAAACTGCTGCTTAAAAACcaagaaaatgtatttcagCATCTTCATGCCGATACATACGTTAACTTTCAACGgaagtcaatgcaaaaaaaaagaaaaatatttctaGTAATTATAAAGCATTACTATTGGTCCATGAGTTGTCGTCATTTgacactataaagaaaaactgcCAGAATAAAAATTACgccaaaaaagtgaaaagaaaaaaaaaaaatggtgaaaggTTTTTGGGGGACAGCGCAAACTTTTTTGGTTTGTAactgtttctgtaaaaatgttaCACAGTCATCAGGCTTGAAACACACActtgacgttttttttttttttttttttttttaatgagttttaaccaaacattttgtttattatgaatatattttgtgtgtgatGCTTATAACAGTTACAGCTCTTAcactagggatgcaccgaaaTAAAGGTATTTGGCCGAAacagaacaaaatgaaacatttgcaacaaaaagagagaatatcaaacacatttttttttgcaggttttcattaGTTTTGCCACTTTCTGTTACtatagcataaataaaaaaaacctacatgcttttttttttgccattttcagcaAGATGAACATTCGATGCATCCCTATTGTCCAGGTTTATTGAGTTGACAGGTAAAGATAGCTCTTAtgaatgtattgttttaaaaagtgcatTACTGACTTAAATGTTGTGGCCACAAGTGCTTTTATTCTTAAAGAGGAGAATGCCAGTGTTTTCTTGCAATTGCATACCATTTAGTGGACCACTGCAACCTGTCTGTGTTGAAATGAAGCTTAAGGAAAACCCTAACTTAATTCCAACTTCACTAAAACTTGGACACCAACTTCTTGGAGTATTCATAAgactttaataataatgtttgtgAAATCTGGGCAAACTGTGGCATTCCCAGTTAATACTGAAACATTGTTGCACCTTTGGGTCACGATATGAAGCTTTATGTACTCAACTAAATGTTTTCCAGTTTGTGCAGAAGAAAATCAACACTACATTATCTCAAGTGACAGATTAGGAGCAATTTAATGCATGCCTTTTCACATGTATCTATTCTCAGATGTCACCTGATATTTCAGCACTGATATTACACTTTGTAATAACCGTATagagagaaataataaaacCTTATTAATCAAAACCAA

Function

NR:

description
PREDICTED: interleukin-6 receptor subunit beta-like

GO: NA

KEGG:

id description
K05060 IL6ST, GP130, CD130; interleukin 6 signal transducer

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022681258.1 True 4131 mRNA 0.43 17 22865141 22880314

Neighbor

gene id symbol gene type direction distance location
ankrd55 ankrd55,LOC107670032,LOC107737049,LOC107702571 coding upstream 1758 22839508 ~ 22863383 (+)
LOC111195066 NA coding upstream 337058 22519419 ~ 22528083 (+)
LOC103022635 mat2al,LOC108440739,LOC108276530,LOC107732036,LOC107653488,LOC107573852,LOC102202437 coding upstream 349556 22509888 ~ 22515585 (+)
tmem150c tmem150c,LOC107558260 coding upstream 388836 22468437 ~ 22476305 (+)
sec31a sec31a coding upstream 411530 22421362 ~ 22453611 (+)
slc38a9 slc38a9,LOC107670042,LOC107564110,LOC107740785,LOC107566906,LOC107715861 coding downstream 28479 22908793 ~ 22928244 (+)
LOC111194992 NA coding downstream 84679 22964993 ~ 22966528 (+)
LOC111194985 NA coding downstream 90108 22970422 ~ 22973005 (+)
LOC103038592 LOC106571427,LOC108427269,LOC108276947 coding downstream 114775 22995089 ~ 23187224 (+)
fut10 fut10 coding downstream 323162 23203476 ~ 23217258 (+)
G178394 map3k1 non-coding upstream 144335 22713737 ~ 22720806 (+)
G178392 map3k1,LOC107670047 non-coding upstream 156740 22707748 ~ 22708401 (+)
G178381 tln1 non-coding upstream 193311 22629911 ~ 22671830 (+)
G178368 tln1 non-coding upstream 259569 22604995 ~ 22605572 (+)
G178344 NA non-coding upstream 341068 22516531 ~ 22524073 (+)
G178472 NA non-coding downstream 49909 22930223 ~ 22930945 (+)
G178474 NA non-coding downstream 55169 22935483 ~ 22941621 (+)
G178476 NA non-coding downstream 60290 22940604 ~ 22941149 (+)
G178477 NA non-coding downstream 62812 22943126 ~ 22943349 (+)
G178482 sh2d4a non-coding downstream 70649 22950963 ~ 22957159 (+)
G178388 hmgcs1,LOC108427280,LOC108277226,LOC107737058 other upstream 155584 22689001 ~ 22709557 (+)
G178352 NA other upstream 319011 22544640 ~ 22546130 (+)
LOC103022948 hnrnpd,LOC108440733,LOC108276832,LOC107702593 other upstream 362982 22493440 ~ 22502159 (+)
hnrnpdl hnrnpdl,LOC107715891,LOC107702595,LOC107653490 other upstream 373638 22486823 ~ 22491503 (+)
LOC103025565 scd5 other upstream 399412 22456319 ~ 22465729 (+)
G178485 NA other downstream 83133 22963447 ~ 22964989 (+)
LOC103032894 LOC108424565 other downstream 1567478 24447792 ~ 24454622 (+)
smpd1 smpd1,LOC107718723,LOC107720657,LOC107556869 other downstream 2363847 25244161 ~ 25257469 (+)
LOC103024073 LOC108424537 other downstream 3950323 26830637 ~ 26879083 (+)
rnasek rnasek,LOC107554319 other downstream 4033436 26913750 ~ 26916344 (+)

Expression


Co-expression Network