Item | Value |
---|---|
gene id | LOC103046108 |
gene name | dlg2,LOC107747009 |
gene type | coding |
species | mexican tetra (Astyanax mexicanus) |
category of species | ornamental fish |
Item | Value |
---|---|
chromosome id | NC_035916.1 |
NCBI id | CM008319.1 |
chromosome length | 36262418 |
location | 26993596 ~ 27443231 (+) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
symbol | description |
---|---|
dlg2 | Predicted to be involved in several processes, including establishment or maintenance of epithelial cell apical/basal polarity; negative regulation of phosphatase activity; and receptor clustering. Predicted to be located in several cellular components, including axon; perikaryon; and synapse. Predicted to be active in several cellular components, including basolateral plasma membrane; neuromuscular junction; and postsynaptic density membrane. Is expressed in nervous system and neural tube. Orthologous to human DLG2 (discs large MAGUK scaffold protein 2). |
description |
---|
PREDICTED: disks large homolog 2 isoform X16 |
id | description |
---|---|
K12075 | DLG2; discs large protein 2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_022681333.1 | True | 6831 | mRNA | 0.45 | 28 | 26993596 | 27443231 |
XM_022681334.1 | False | 6807 | mRNA | 0.45 | 27 | 26993596 | 27443231 |
XM_022681335.1 | False | 6807 | mRNA | 0.45 | 28 | 26993596 | 27443231 |
XM_022681336.1 | False | 6786 | mRNA | 0.45 | 27 | 26993596 | 27443231 |
XM_022681337.1 | False | 6777 | mRNA | 0.45 | 28 | 26993596 | 27443231 |
XM_022681338.1 | False | 6771 | mRNA | 0.45 | 27 | 26993596 | 27443231 |
XM_022681339.1 | False | 6771 | mRNA | 0.45 | 28 | 26993596 | 27443231 |
XM_022681340.1 | False | 6762 | mRNA | 0.44 | 26 | 26993596 | 27443231 |
XM_022681341.1 | False | 6762 | mRNA | 0.45 | 27 | 26993596 | 27443231 |
XM_022681342.1 | False | 6753 | mRNA | 0.45 | 27 | 26993596 | 27443231 |
XM_022681343.1 | False | 6708 | mRNA | 0.45 | 26 | 26993596 | 27443231 |
XM_022681344.1 | False | 6702 | mRNA | 0.44 | 26 | 26993596 | 27443231 |
XM_022681345.1 | False | 6684 | mRNA | 0.45 | 26 | 26993596 | 27443231 |
XM_022681346.1 | False | 5633 | mRNA | 0.45 | 25 | 27099759 | 27443231 |
XM_022681347.1 | False | 5882 | mRNA | 0.45 | 25 | 27056181 | 27443231 |
XM_022681348.1 | False | 5690 | mRNA | 0.45 | 25 | 27119294 | 27443231 |
XM_022681349.1 | False | 5561 | mRNA | 0.45 | 22 | 27288436 | 27443231 |
XM_022681350.1 | False | 5363 | mRNA | 0.44 | 22 | 27226312 | 27443231 |
XM_022681351.1 | False | 6678 | mRNA | 0.44 | 25 | 26993596 | 27443231 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
crebzf | crebzf | coding | upstream | 5248 | 26983250 ~ 26988348 (+) |
sytl2 | sytl2 | coding | upstream | 21195 | 26941351 ~ 26972401 (+) |
LOC103031870 | NA | coding | upstream | 67023 | 26921084 ~ 26926573 (+) |
LOC103026857 | LOC108424542,LOC101883815,LOC107702789,LOC107586167,LOC107675994,LOC107554304,LOC108277076 | coding | upstream | 84373 | 26902839 ~ 26909223 (+) |
LOC103026363 | LOC108424538 | coding | upstream | 91267 | 26897470 ~ 26902329 (+) |
hyou1 | hyou1,LOC107577052,LOC107691632 | coding | downstream | 52884 | 27496115 ~ 27510446 (+) |
crtam | NA | coding | downstream | 110971 | 27554202 ~ 27560568 (+) |
LOC103043364 | LOC107691633,LOC107751398,LOC108423781,LOC107693988,LOC107597532 | coding | downstream | 118632 | 27561863 ~ 27566576 (+) |
c20h11orf63 | NA | coding | downstream | 124497 | 27567728 ~ 27623665 (+) |
LOC103040165 | LOC108423783,LOC108277314,LOC107746996 | coding | downstream | 229718 | 27672949 ~ 28385095 (+) |
G179345 | NA | non-coding | upstream | 104497 | 26884416 ~ 26889099 (+) |
G179335 | NA | non-coding | upstream | 140613 | 26852695 ~ 26852983 (+) |
G179320 | slc25a1a,LOC108424536,LOC107586170,LOC107708615,LOC107720673,LOC107554324,LOC108276564,LOC105890537 | non-coding | upstream | 194394 | 26794403 ~ 26799202 (+) |
G179239 | NA | non-coding | upstream | 592329 | 26401008 ~ 26401267 (+) |
G179183 | NA | non-coding | upstream | 1024804 | 25964643 ~ 25968792 (+) |
G179371 | NA | non-coding | downstream | 1546 | 27444777 ~ 27447272 (+) |
G179427 | NA | non-coding | downstream | 4164 | 27447395 ~ 27448989 (+) |
G179428 | NA | non-coding | downstream | 6171 | 27449402 ~ 27466359 (+) |
G179429 | NA | non-coding | downstream | 8316 | 27451547 ~ 27452069 (+) |
G179432 | NA | non-coding | downstream | 26486 | 27469717 ~ 27469950 (+) |
rnasek | rnasek,LOC107554319 | other | upstream | 77252 | 26913750 ~ 26916344 (+) |
LOC103024073 | LOC108424537 | other | upstream | 114513 | 26830637 ~ 26879083 (+) |
smpd1 | smpd1,LOC107718723,LOC107720657,LOC107556869 | other | upstream | 1736127 | 25244161 ~ 25257469 (+) |
LOC103032894 | LOC108424565 | other | upstream | 2538974 | 24447792 ~ 24454622 (+) |
G178485 | NA | other | upstream | 4028607 | 22963447 ~ 22964989 (+) |
LOC103038954 | zgc:101846,LOC106525086,LOC108416226,LOC101161532 | other | downstream | 81071 | 27524302 ~ 27525441 (+) |
G180235 | erg | other | downstream | 3696113 | 31139344 ~ 31151095 (+) |
G180266 | NA | other | downstream | 3989967 | 31433198 ~ 31433909 (+) |
G180460 | cct8,LOC100304907,LOC107693911,LOC107701129 | other | downstream | 4821767 | 32264998 ~ 32273798 (+) |
ufm1 | ufm1,LOC107701138 | other | downstream | 5607011 | 33050242 ~ 33067932 (+) |