cblb (cblb,LOC107693962,LOC107576804,LOC107747038)


Basic Information

Item Value
gene id cblb
gene name cblb,LOC107693962,LOC107576804,LOC107747038
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 30279096 ~ 30419086 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022681396.1
GCTGCGCTGAGCTGAGCTCTGCTCTCCTCCACGGCTTTTAAACGCGTACTGATTTAGAAACGAGCCAACGAGCTGCAGATCACTGCGAGCGAAAACGGGATTATTGGACCTTTTAAGGCTGTTTTGGGGAACGTTGCTGTGGAATGTATTCTGCTGACAGCGCGTTGGGAGAAGATATGTAGTAGTTTCGCCAGTATTTTCGCTGTTTTGTCGCTTTTGTTACGGTTTTATTTTGGTTGGTGGGGACCTCCTCGCTTCAACTCGGCAACTCTCCATTGACATTCCCTGTTTTTGGCAGTTCCTCTGTTTTGCCGCATGCGGAGGAAATGGCAACCGCTCTCAGTGGCCGGGGTCTGGGTGGACGGACGCAGAACCAGCGGAAAGGCCGGATTCTGGGCTTTATCGATGCCATCCAGGACGTGGTGGGACCTCCCAAACAAGCCGCCGCCGACAGGAGGACGGTGGAGAAAACCTGGAAACTCATGGACAAAGTGGTGAGATTGTGCCAGAACCCCAGGCTACAGTTGAAAAACAGCCCTCCTTACATCCTGGACATCCTGCCGGACACCTACCAGCACCTGAGGATGATCCTGTGCAAGTACGAGGAGAACCAGAAACTGGTTCAGCTCAGCGAGAACGATTACTTTAAAGTCTACATTGACAGTCTGATGAAGAAATCCAAACGGGCTATCCGCCTCTTTAAAGAAGGCAAGGAGAGGATGTACGAGGAGCAGTCGCAAGACAGgcgAAACCTCACCAAGCTCTCGCTCATCTTCAGCCACATGTTGGCCGAGATCAAGGCCATCTTCCCCGATGGCCAGTTTCAGGGAGACACTTTCCGCATCACCAAGGCCGACGCTGCCGAGTTCTGGAGAAGATTTTTCAGTGAAAAgacGATAGTGCCGTGGAAAGTGTTCCGTCAGTGCCTTCACGAAATGCATCCCATCAGTTCAGGTCTGGAGGCCATGGCTCTCAAGTCCACCATCGACCTCACCTGCAACGACTACATCTCTGTTTTTGAGTTTGACATTTTCACGCGCCTCtttcagccATGGGGGTCTATTCTGAGGAACTGGAACTTCTTGGCAGTAACTCATCCAGGCTACATGGCCTTCCTCACCTATGACGAGGTGAAGGCACGACTTCAGAAGTACATCAACAAACCTGGCAGttaCATTTTTCGTCTGAGCTGCACGCGGCTGGGCCAATGGGCCATCGGCTACGTCACCAGCGATGGAAACATCCTGCAGACCATCCCCCACAACAAACCGCTCTTCCAGGCACTCATCGACGGCTGCCGGGAAGGCTTCTACCTGTTCCCTGATGGTCGCAGTTATAACCCGGACCTCACCGGCCTGTGTGAGCCCACCCCACACGACCACATCAAAGTCACACAGgagcAATACGAGCTGTACTGTGAGATGGGCTCGACATTTCAGCTGTGTAAAATTTGTGCAGAGAACGATAAGGATGTGAAGATTGAACCTTGCGGTCACCTCATGTGCACCTCCTGTCTCACAGCGTGGCAGGAATCAGATGGCCAAGGCTGTCCGTTCTGCCGCTGCGAGATTAAGGGCACAGAGCGCATCATTGTGGACCCCTTCGACCCACGCAACGAAGGTGCCAAGTGCTTCTTCCTCGAGCAGTTCAACTCTCCCATGCTGGATCTGGACGACGACGATGACCGAGACGACTCGCTGGTTATGAACGGCCTGGCCAGCATCAGGAAGTGTACTGAGCTTCAGAACTCTCCAGTGATGTCCCCCAGCTCGTCTCCTGTAAGCCAGCGCAGAAAAGCCATGGCTGAACATGCAAGCAATCAGCACCTCACCCTGCCTCCCGTACCACCTCGACTCGACCTCATCCAGAAGGGGGTGATCCGCTCACCTGCTGCCAGCCCCACCGGCTCACCAAAGTCATCGCCTGGAATGGCCAGGAAACAGGACAAGCCCCTCCCTGCCCCTCCACCTCCACAGAGAgacccccctcctccccctccacccGAACGCCCTCCACCCATCCCTCCCGAGGGCCGAGCAGCATGGATCGCCTCGCCCTCCTCCGGACTGCCCAGAGACCCCGTGCTGCCCTCAGAGGCCTGGACCCCGAAGGACAGCAGCCCCCTGTTAGACAGCAGAACAGGACTGGAGCGCTCACCTAAACTTGCCCACGTCGCCCCTGCTCATATCAACGGAAGACCCCTCAGCTGCAACATTGAATTCGGGGCCAACCGATCCAGCTACagaccagacacacacacagactgcagCAAGCCCCTCTCCAATGGCCTGATGCTCTCAGATGAGTATGATGTACCTCCTTTGCGGCATTCCCCTCCTCCACCCTCCCTTACCAGCAACAGCAACCAGAGGTTTAACAATCCATTCAGCAGCCCATGCTTGGAGCGATCACGGCTATTAACAGATAGAGTAGAGGATGAGTATCAAATCCCTTCATCACACCCTGTATGTATCACACAGCCTCCCGTCTGCATCTCCGTACGCATTCCTAGCAGGGGTTTAGAGAACGGCTCGTCAGATCTGTCCTCGGAGGGGAAGAAGCCCAAAGTTCCTGAGCACAGTGGGTTCGACTCTGGCTTGTCGCTTTCGGGTGTGGTGCACCAAACACAGTGTCCCCTCCACAACAACAGGACGCCATCAGACTACGACATTCTACTGCCCCCACAAGCCCCTTCAGCAGAGGATCTTTTCAACGCGCTCCCTCCATCACAGCCTCCGCCTCCTCCACCCGTCAGACACAGCTTTCCAGATGTCTCCTTATCTCCGTCCTGCTCCAGAGCTGCTCGGCCCGCATCTGGACACGACCACTTCCTCCTCAACCCAGATGCTTTCCTGGATGCTCTGAGTAACTCCGTCCCTCTGCCTCCGGTTCGAAGACAGACAGGGGAGAACATGAAGTCACCAGTCAGAATATCACAAGAATATGACCAGCTGCCTCCTACATCAGTGTCCGGGGATTGCCTGCAGGCACCCGCGCGGCCGCCAAAGCCCTTCCCCAGGAAGACCCCTCCAGACGTCCAGCACAGGAGGCCGCCCGAATCCTCCCAGGAAAACGTGGACGCCAAGATCGCCAAGCTGATGGGCGAGGGCTATTCGTTCGACGACGTGAAGAGGGCGCTGATGATCGCCCAAAACAAGGTGGACGTGGCGAGGAACATTTTGCGGGAGTTCGCCCTGGTGGCCCCGAGACTCAACCTGTAGCCAAACGCCcaacatctctctcttttctctctgtgtctatctgtctctctctctctctctgaatgacTGTCTGATTCTGTCCTGAGAACTGGGGCTGCAGACGGTCAGCTTACAGGGCCATTCCAGTACCTGACCTGGATCAGAACGAGATCTGGGACTTGGGACTTGCTCTCTGCGAGACTGGACGCAGGTCCAAGGAAGAGTCGTCAATGTTTCTAAACACAAAAACCTgtgtgggggggagggggggagaAAATAGCCTTGTGTTTACAGTTATGTGCCGCGTGGTGgcttactgctgctgctgtctgctgGGTCCTTGTCCATTCGGTTTCAACTCATCCAGTTCACAGATCTCCAAAAGCATTGGTTTATGGCTCTGCTCCTGCATTATCCCTGGATAGCTCAGTTTAGGAATGTTAAGCGGAGTTGTTAGGGGGTCGCTGTTTCACGGTTGTCATGTCATATGATTGGATTGAatggttccagcacactggagCAGGGTAGGAACCTGGATTTCAGCAAAGTTAGCAAATTTCCCTGCTCTAATACATCTGCCAAACCTGGCAGTTAAAGGATAGAAGTTCCACAGCCCTGCGCTAGAGCATCTTatcattttctttgtttttaatttctttttccaAGTATGGTCCGAGatcagaactgtccatcagttTGATTGGAACAtga

Function

symbol description
cblb Predicted to enable SH3 domain binding activity; receptor tyrosine kinase binding activity; and ubiquitin protein ligase activity. Predicted to be involved in negative regulation of epidermal growth factor-activated receptor activity and signal transduction. Predicted to act upstream of or within cell surface receptor signaling pathway and regulation of signaling. Predicted to be located in cytoplasm. Predicted to be active in membrane raft and plasma membrane. Human ortholog(s) of this gene implicated in lung non-small cell carcinoma and type 1 diabetes mellitus. Orthologous to human CBLB (Cbl proto-oncogene B).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K22517 CBLB; E3 ubiquitin-protein ligase CBL-B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022681396.1 True 3911 mRNA 0.54 19 30279096 30419086

Neighbor

gene id symbol gene type direction distance location
picalm picalm,LOC107744613 coding downstream 650697 29572654 ~ 29628399 (-)
robo3 robo3,LOC107751391,LOC107577175 coding downstream 914820 29159040 ~ 29364276 (-)
pknox2 pknox2,LOC107691639,LOC106567647,LOC106603668 coding downstream 1280657 28954039 ~ 28998439 (-)
panx3 panx3,LOC107747045,LOC107686209,LOC107589683,LOC107579026,LOC107691702 coding downstream 1329180 28939591 ~ 28949916 (-)
LOC103039144 LOC108423784,LOC108277316 coding downstream 1708991 28411012 ~ 28570105 (-)
crybg3 NA coding upstream 258685 30677771 ~ 30733688 (-)
hlcs hlcs coding upstream 382433 30801519 ~ 30848802 (-)
pigp NA coding upstream 438671 30857757 ~ 30875590 (-)
dscr3 dscr3 coding upstream 507082 30926168 ~ 30932814 (-)
kcnj6 kcnj6,LOC107690833,LOC107747353 coding upstream 553394 30972480 ~ 31057287 (-)
G180045 NA non-coding downstream 486 30276867 ~ 30278610 (-)
G180046 NA non-coding downstream 3378 30274739 ~ 30275718 (-)
G180044 NA non-coding downstream 5688 30272607 ~ 30273408 (-)
G180047 NA non-coding downstream 10386 30219248 ~ 30268710 (-)
G180023 NA non-coding downstream 151431 30127191 ~ 30127665 (-)
G180077 NA non-coding upstream 57364 30476450 ~ 30477009 (-)
G180086 NA non-coding upstream 122738 30541824 ~ 30548024 (-)
G180092 NA non-coding upstream 144736 30563822 ~ 30564737 (-)
G180122 NA non-coding upstream 158219 30577305 ~ 30578205 (-)
G180196 NA non-coding upstream 471582 30890668 ~ 30907924 (-)
G179816 NA other downstream 1427991 28850690 ~ 28851105 (-)
G179578 LOC108423781,LOC107751398,LOC107693988,LOC107577128,LOC107691633,LOC107588586 other downstream 2712404 27561845 ~ 27566692 (-)
G179583 zgc:101846,LOC106525086,LOC108416226,LOC101161532 other downstream 2753708 27524328 ~ 27525388 (-)
LOC103038646 zgc:194989,hist2h2l,LOC107719244,LOC107667924,LOC107574861,LOC108277172,LOC105900366,LOC103356012 other downstream 2754961 27523131 ~ 27524135 (-)
ift46 ift46 other downstream 2801118 27470086 ~ 27477978 (-)
G180188 dyrk1a,LOC108411986,LOC107572954 other upstream 527860 30946946 ~ 30957767 (-)
LOC103030555 LOC108423819,LOC107701125,LOC107718772,LOC107720543,LOC107556862,LOC107693906 other upstream 1475116 31894202 ~ 32071924 (-)
tmem135 tmem135,LOC107701128,LOC107718730 other upstream 1821093 32240179 ~ 32262598 (-)
tiam1 tiam1,LOC108423828,LOC107718732 other upstream 2017239 32436325 ~ 32584343 (-)
LOC103033173 NA other upstream 3386154 33805240 ~ 33855632 (-)

Expression


Co-expression Network