LOC103036259


Basic Information

Item Value
gene id LOC103036259
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 32704931 ~ 32709254 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022681434.1
atacagatacagcattttagtacttaagtacagtattgaagtagttctacttcaTTACTATATATCTCTGGTCaggatatatgtttttttttattcagatacACAGACCTTTATCTCTACATTGCCTACTAAGTAAGATAACATAGACAGAAAGGGGACAAGTCAGCATTTCTTGCATTTCGgacaattaatataatttatatttaccaTTTACATTTCATACATCCTTGAAGTACTACTGATAACTGAAACCATTGTTGATTCTATTCATTTTAATGTGGAAATAGATGACTTATACACAATAAGATACACAAATTTGTAGCATGAAATTCATACTCCATGCTTGACATTtgcttttatttgagttaattattaatttctgCTCTGTTTGCCTATATAAAACTAAGACGCATACTGGAATTTGAACTCAGATTCAGATTTGTGCTCTGTTCACGCTGCTCAGGTTAGTTAaggtttaaagattttaaaaaagaaagcatATGGGCACAATGAATCCAGTTTTGTATAACAAGCAGTACTCCTTCACTGGACTTCTTCTCACCGTTTCTGTTCTTATTCTGAGCTGTGAAAGCAGTAAAATCCTGATTTATCCTTTGGATGGCAGTCACTGGGTGAACATGAAGCTGCTGGTTGAGGCGCTACACTCCAAGGGGCATGAAATCACTGTGATCCGACAGAGTTCCAGCTTTTTTATCAAGGAAGACCCTTCACTGTACTCAATTATACCAGTCAACGATGACATTGAGGATCTGAAGGAGTTTTATGATGAGTATTTAGAAAAGCACATACAGATCCAGAGAGGTCAGAGTTCAACCCTGACTTTCTTGAAGATGCAGATGGATTTTTTGTTCCTAATATcccatttacatttactttcatAGGATAAGGAGCTGGTGAAGAGACTACAAGATGAacaatatgatcttgttttaaCTGATCCAGCTCTCACTGGTGGTGTTCTTTTGGCTCATTACTTGAACTTACCCTTTGTTCTGAATGCTCGTTGGATCTCCAGCGGAGAAGGCCACTTTGCTATTGCACCATCACCTTTATCCTACATACCTGTACCAGGTACTGGCCTCACAGACAAGATGACCTTTACTCAAAGAGTCAAGAACTTCCTTTTCTATCCAATTATTCTTTTCCAGGAGTTTTTTTTAGTGGGGCCTCATTATAAAGCATTTTGTAAGAAATACTTTGACAAAGACTGTGACATTGTCAGTCTTCTCCAGGAGGCCGATATCTGGCTCATGAGGCTCGACTTTGTATTCGATTTCCCCAGACCCACCATGCCCAATGTGGTTTACATGGGTGGGTTCCAGTGCAAACCCTCAAAACCCCTCCCTCAGGACTTGGAGACTTTTGTGCAGAGTTCAGGAGAACACGGCTTCATCATCATGTCTTTGGGAACAGCAGTAGACAGTCTTCCAGCTGACTTAGTGCAGGAAATCGCTGCTGTGTTCTCAAAACTACCACAGAAAGTCATCTGGAGACACCTAGGAGCTAAACCATCCACCTTGGGAAACAACACTCTGCTCGTGGACTGGATGCCACAGAACGACCTCCTGGGACACCCAAAGATCAAAGCTTTTGTAGCTCATGGAGGAACCAATGGAGTCCAGGAAGCCATCTACCACGGAGTTCCCGTCCTCGGCATCCCTCTGTTCTTTGACCATTTTGATAACCTCTTGAGGATCCAAGCCAAAGGAGCTGCAAAGATACTGGAGTTATCTCAGCTGAATGGACAAACATTTGAACAGATGATACTGGAGATTCTCAATGATGAATCCTACCGGATGAACATGCAGCGACTCTCCAGACTACACAGGGACCAGCCTATGAAACCTCTAGACACTGCTGTCTTCTGGATTGAGTATGTTATGAGGCATAAAGGAGCTCCTCACCTGCGCACAAAGTCCTACAGGATGCCGTGGTACTCCTACCATTCACTGGATGtgattctgtttctgtttagtATAGCAGCAGTGACTGTTTTCATGATAGTAGCGTTCATTAGATATGTGTGTTGTAGAGCatgttgtaaaagaaaagtgaaaagtcaatgaatgaatgcatgaaTAGGGTATAGCATTATCAGCATTATGAGTATCAAGTATATTCCTTGCTATATCATTGTccaatattaaacaaacaaaatcgtgaagaaaattctaaatattGAATCACACCAGTGTCAGAACACAGTATACAGTACATCTATTTACATTTCAAAGATTGCTTATTGCTAAGATAGGAAATAGAAAAGGTGAGACTTGAaagttttgctttattttggccaaaattatattttttcgcactataaggtgcatccgaatataaggtgcattttaagtggCTCTAGTTAGGAATatgggtgttgccatgtttcccctTAAATTGTAACTAAATTGTAATTCTTAATAAAGCATTTTCagacgagtcagacaagtcaaagcagcgctggatgttaatctacacagatttctctcctgaaaactgtttatttgggtgagtaaaactgCCACtgccacccgacagcgctacactgaggaaccctcagTTCTCCGGGAAACCAGGTCAATATtaactagtgttttttttaacatagcttgttttaacatggtaaacgcgcaagctacaggtcgataatacttacctctgaacagccaaatggctagcgcttagcgggtaatgctaataatgctctagcagtgctattcGGTGTTGGAAGCATACTACAGGTCGattatacttacctctgaacagccgAATGGCTAGCGCTTatcaggtaatgctaatgctgctccagcagtgctagtaggggttagcagcagactacgggccaataatactcacctctttGCGGCCCAATGGCTAGCacttagcaggtaatgctaaagctgctccagcagtgctagccggggttaaaagcaggctacaggttttACTGCTTGTACCTGACTGGTACAATTTGTACATAagaagcactggattataaagctcactgtagctttaaaaaaaaaaaaaagtattttaagtgtgtgccttatagtgcaaaaaatacagtaagtggAAACTCAGTGACAGCTGATTTAAGAACCTGCTGACCTTTTTGCTTGGCTCTTTGTCAAGTCTGTTTGATAACAGACAGCCCGAAAAGATAACCAATCAAATAACCAATCTAAACAACCCCGAAGCTCCAACACAGAACTCCTAAACTGCTTAATAAAACGCTACTGCTTTACTATCTACTGCAAATCCAGTTTGCCCAATAGTGCAGGAAAAATGAGCACTAAAATTCCACACAGTCTCATTTGGGTCTTCCTGTTGGGCCTTCCCCTCTGTAACTTTGAAAGATGCTCTATGAAATGATAGCTATCAcaggaaatgtttattttgcacCACATTTACTCTCCATCCTTCTTCCTACCCTTCTAAACTCTTTTCCTCCATTCATGCAGCACCACGACATCTGCCTCACGCCTGGCCGACATCACTGGACTTTTGAAATCTTAACAAATTGAAATGTTGAAATTGTGAAACACCCCATTTATAATCACACTACAGTTTCTACAGATTATTTCCTTAGCCGTCCTTTAGTCATCGCAGCCTCTATTGCTGCAAATTTAGGCCAGAATTAAactcacatttttaaaaaaattcctGAATAAGTGTACCATCTTTCAGAAGCTGGGATCTAGTGATAGTTATGTTTGTTTtagcagcacaaaaaaaatgtttccctTAACAGGCAGGCATTTTTGTAAATTGTGTCTGATATTAAGGACTTCTATTCAATCATTGcataaaaatgtttcatgtttgataCTGAAAATCATTATTGTACtggaaaatatacaaaaatgtagtaaacctgcaactgtcaaaatataatgaataaaaaaacataaggcTAGAACTTTCTTGAACTttatattaaaatcaatatattcCTGAATACAAATAGACACTAGAGATAGGGGCAACATTACCCACGCAACACACCCATGCAcagaaatcactgtttttacaccattaacaagctcaaagtagctccacggCTTCATTGATAGAATTTTGCGGGTCCTGACAGATTTCTCCCTTAAATAatgttgtgttgtgtatgtTTTAGTTTGTGCATAAAAGCCTTGCTGTGTAATCCA

Function

GO:

id name namespace
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG:

id description
K00699 UGT; glucuronosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022681434.1 True 4184 mRNA 0.39 3 32704931 32709254

Neighbor

gene id symbol gene type direction distance location
LOC103029275 NA coding upstream 13447 32687753 ~ 32691484 (+)
LOC111195090 NA coding upstream 54599 32643512 ~ 32650332 (+)
bach1 NA coding upstream 381983 32306457 ~ 32322948 (+)
map3k7cl map3k7cl coding upstream 405986 32281279 ~ 32298945 (+)
LOC103040837 rab38,LOC103040837,LOC108423822,LOC108277304,LOC107701102,LOC107718792,LOC107557212,LOC107693892 coding upstream 499155 32190848 ~ 32205776 (+)
LOC103028331 frem2,frem2a,LOC107720635,LOC107701139,LOC108276566,LOC107555183 coding downstream 400737 33109991 ~ 33275686 (+)
LOC107197579 trim47,LOC108423837,LOC107701143,LOC107718738,LOC107557227,LOC107720633 coding downstream 577181 33286435 ~ 33297195 (+)
synj1 NA coding downstream 1149422 33858676 ~ 33905991 (+)
c20h21orf59 c10h21orf59,cunh21orf59,LOC103033817,LOC107691672,LOC105907446 coding downstream 1201970 33911224 ~ 33918741 (+)
mis18a NA coding downstream 1251702 33960956 ~ 33967651 (+)
G180595 sod1,LOC106604042 non-coding upstream 46544 32651332 ~ 32658387 (+)
G180591 NA non-coding upstream 86107 32618545 ~ 32618824 (+)
G180521 NA non-coding upstream 101888 32602759 ~ 32603043 (+)
G180510 NA non-coding upstream 215960 32451032 ~ 32488971 (+)
G180504 NA non-coding upstream 259307 32436370 ~ 32445624 (+)
G180612 NA non-coding downstream 91533 32800787 ~ 32802387 (+)
G180642 NA non-coding downstream 254687 32963941 ~ 32964260 (+)
G180643 NA non-coding downstream 257957 32967211 ~ 32967542 (+)
G180686 NA non-coding downstream 326797 33036051 ~ 33036361 (+)
G180698 NA non-coding downstream 348696 33057950 ~ 33059042 (+)
G180460 cct8,LOC100304907,LOC107693911,LOC107701129 other upstream 431133 32264998 ~ 32273798 (+)
G180266 NA other upstream 1271022 31433198 ~ 31433909 (+)
G180235 erg other upstream 1553836 31139344 ~ 31151095 (+)
LOC103038954 zgc:101846,LOC106525086,LOC108416226,LOC101161532 other upstream 5179490 27524302 ~ 27525441 (+)
rnasek rnasek,LOC107554319 other upstream 5788587 26913750 ~ 26916344 (+)
ufm1 ufm1,LOC107701138 other downstream 340988 33050242 ~ 33067932 (+)
LOC103026201 LOC108277347,LOC108423746,LOC106604019 other downstream 1463670 34172924 ~ 34328970 (+)
LOC103024954 LOC108423745 other downstream 1625322 34334576 ~ 34507324 (+)
nsun5 nsun5,LOC102793237,LOC107686168 other downstream 2683267 35392521 ~ 35403624 (+)
LOC107197592 NA other downstream 2891229 35600483 ~ 35607593 (+)

Expression


Co-expression Network