LOC103023494 (LOC107577900,LOC108442441)


Basic Information

Item Value
gene id LOC103023494
gene name LOC107577900,LOC108442441
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 35518171 ~ 35541791 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022681502.1
gaaagagagagagagcaggagtgCTGGTCTCAGTTCATGTCTGGCTGTATGTAGTCTGTGGTTGTGagaggactttttttttttacttttttaaacactgatctTTTTCAGTGTCTGGTCTGATCAGATCTGAGTCTGCTCTgattgatctgatctgatctgtagATGCTGATGTTTTGTTTTTCGTCTCTCCGGTCATGGGGTGTGTGTTCTCTTTGCCTGAGGACAGACTGGCAGCAGCGGAGAGGGCAGCACCAATGCAGGAGAACAGCTTTAttgagaaaatgaagaaaactaACAGAAATGTTATAGTGTTCTACGGCTCTCAGACGGGCACGGCTGAGGAGTTCGCTACCCGCCTGGTGAAGGATGCCCAGCGCTATGGTATAAAAGGCATGGTGGCTGACCCTGAGGAGTACGACATGTCTGAGCTGCCTCGTCTCACAGAGGTTGTGAACTCCCTGGCTGTGTTTTGCATGGCCACTTATGGGGAAGGAGAACCGACCGATAACGCCCAGGGCTTTTACGACTGGATGCAAGTGACAGACGTCAGTCTGGAAGGAGTTCATTTCTCAGTGTTTGGGTTGGGGAATAAAACCTATGACCACTACAATGCCATGGGGAAATACACAGACAGACGGCTGGCAGAGCTGGGTGCTACACAAATTTTTGACCTGGGCCTTGGAGATGACGATGGCAACTTGGAGGAAGACTTCATCTCATGGAAGGCACAGTTCTGGCCAGCTGTATGTGCGTTTTTTGGAGTGCAGCCGACACAAGAGGAATGCAGCGTCCGGCAGTTTGAACTGGTGGTCCACAATGACATTGATTTGAATGAGGTGTACACAGGCGAGGTGGGCTGTCTCAAAAGCTTTCAGGTCCAGAAACCGCCTTTTGATGCAAAGAATCCATACTTGGCAGAGGTAACCGTGAACCGTAAACTAAACCAGGGTGGGAGTCGccatttaatgcatttacaacTGGACATCTCTGGCTCTAAAATCAGGTATGATGCTGGAGACCACGTTGCTGTGTACCCCGTGAACGATGTGTCACTGGTGAACAGACTGGGAGAGAGACTTGGTATCGACCTCGACACAGTCATCACTCTGAAGAATCTAGATGaGGAGGCCAGTAAGAAGCACCCGTTCCCCTGCCCCACCACCTACCGCACAGCTCTGACCCACTACCTGGACATCACCAATCCACTGCATACAAATGTGCTGTTTGAGCTGTCTCAGTACGCCTCTGACTcagaggagagggagaggatGTGCAGGatgtcctcctcctcttctgaGGGCAAGGCTCTGTACCACAGTTGGGTGGTGGAGTCTGAGAGGAACATCCTGGCTGTTTTAGAGGACCTGCCGTCTCTGAACCCTCCTGTAGATTACCTGTGTGAGCTTCTACCTCGTCTGCAGGCACGCTACTACTCCATAGCATCATCTGCTAAGGTCCACCCCACCTCTATACACATCTGTGCTGTGGTGCTAGACTACACTACCAAGACAGGGCGAGTCTTCAAGGGAGTAGCCACCAACTGGCtcaaaaacaaagtgaagactGAGGGTGGTCCCTGGCCCACTGTGCCCATCTACGTCAGAAAGTCGCAGTTCCGCCTCCCGTTCAAAGCCAGCAATCCTGTAATTATGATTGGGCCAGGCACCGGAATCGCTCCCTTCATGGGCTTCCTCCAGGAGAGAGCATGGCAGAAACAACAAGGAAATGAAACTGGTGAGACAGTCCTTTACTTCGGCTGCCGGCATAAGAATGAGGACTTCATTTACCAGGAAGAACTCGAGGAGTTTAAGAAGGCCGGGGTGCTGACACAGTTACATGTGGCCTTTTCCAGGGATCAGGAGCACAAGGTCTATGTCCAACATCTCCTCAAACAGAACAAGGAACATTTATGGAAGCTGATCCACAGCAACAATGCACACATCTACGTCTGCGGTGATGCTCGTAACATGGCCAGGGACGTCCATGAGGCTTTTCACGAGATCGCTGAGGAGGCTGGAGGCCTGACACACACTCAGGCTGTGGACTATTTCCAGCGGCTGATGACTAAAGGCCGCTACTCGCAGGACGTGTGGAGCTGAACCAGACTGTGATCATTACTTTACCTCTGATTTTATACCATTACTTCAGTTATATTTACTGCTTGCGTGCACTGTTACCAGCTCACCATGAGCTGAAGCGAGACTGTGACATTGTGAGATGTACACACAGTAATTTCAGAACATTATGACCATATAGGAACAGTTATGGTAGGAACTGTAGTTCTTCTGTTTTCCTGCCTACCTTGTTATTCTCCTTTCACCCcatttctataaaaaaagagagttCTGACTGTGTATAACCACTGATAAGTAAGTTACAGGGGTTAATGCACTAGACCATGATATTGCAATTGAATTAGCGCCAGTGGAACACAAACACTCCACTGCACAACAATCAGTATTACaacattttgtatttcttttatcaAGTGTGAAATAATCCTTAATATTcatgattatatttatttatttaataaagatgtATTAGTTTTTTGAATGAAACAAAACAACGACCTTTTTgttttatgaatgaatgaagttcaacttatatagcgcctttctagaaacccaaggacgctttaca
>XM_022681503.1
aaagagagagagagcaggagtgCTGGTCTCAGTTCATGTCTGGCTGTATGTAGTCTGTGGTTGTGagaggactttttttttttacttttttaaacactgatctTTTTCAGTGTCTGGTCTGATCAGATCTGAGTCTGCTCTgattgatctgatctgatctgtagATGCTGATGTTTTGTTTTTCGTCTCTCCGGTCATGGGGTGTGTGTTCTCTTTGCCTGAGGACAGACTGGCAGCAGCGGAGAGaACAGAAATGTTATAGTGTTCTACGGCTCTCAGACGGGCACGGCTGAGGAGTTCGCTACCCGCCTGGTGAAGGATGCCCAGCGCTATGGTATAAAAGGCATGGTGGCTGACCCTGAGGAGTACGACATGTCTGAGCTGCCTCGTCTCACAGAGGTTGTGAACTCCCTGGCTGTGTTTTGCATGGCCACTTATGGGGAAGGAGAACCGACCGATAACGCCCAGGGCTTTTACGACTGGATGCAAGTGACAGACGTCAGTCTGGAAGGAGTTCATTTCTCAGTGTTTGGGTTGGGGAATAAAACCTATGACCACTACAATGCCATGGGGAAATACACAGACAGACGGCTGGCAGAGCTGGGTGCTACACAAATTTTTGACCTGGGCCTTGGAGATGACGATGGCAACTTGGAGGAAGACTTCATCTCATGGAAGGCACAGTTCTGGCCAGCTGTATGTGCGTTTTTTGGAGTGCAGCCGACACAAGAGGAATGCAGCGTCCGGCAGTTTGAACTGGTGGTCCACAATGACATTGATTTGAATGAGGTGTACACAGGCGAGGTGGGCTGTCTCAAAAGCTTTCAGGTCCAGAAACCGCCTTTTGATGCAAAGAATCCATACTTGGCAGAGGTAACCGTGAACCGTAAACTAAACCAGGGTGGGAGTCGccatttaatgcatttacaacTGGACATCTCTGGCTCTAAAATCAGGTATGATGCTGGAGACCACGTTGCTGTGTACCCCGTGAACGATGTGTCACTGGTGAACAGACTGGGAGAGAGACTTGGTATCGACCTCGACACAGTCATCACTCTGAAGAATCTAGATGaGGAGGCCAGTAAGAAGCACCCGTTCCCCTGCCCCACCACCTACCGCACAGCTCTGACCCACTACCTGGACATCACCAATCCACTGCATACAAATGTGCTGTTTGAGCTGTCTCAGTACGCCTCTGACTcagaggagagggagaggatGTGCAGGatgtcctcctcctcttctgaGGGCAAGGCTCTGTACCACAGTTGGGTGGTGGAGTCTGAGAGGAACATCCTGGCTGTTTTAGAGGACCTGCCGTCTCTGAACCCTCCTGTAGATTACCTGTGTGAGCTTCTACCTCGTCTGCAGGCACGCTACTACTCCATAGCATCATCTGCTAAGGTCCACCCCACCTCTATACACATCTGTGCTGTGGTGCTAGACTACACTACCAAGACAGGGCGAGTCTTCAAGGGAGTAGCCACCAACTGGCtcaaaaacaaagtgaagactGAGGGTGGTCCCTGGCCCACTGTGCCCATCTACGTCAGAAAGTCGCAGTTCCGCCTCCCGTTCAAAGCCAGCAATCCTGTAATTATGATTGGGCCAGGCACCGGAATCGCTCCCTTCATGGGCTTCCTCCAGGAGAGAGCATGGCAGAAACAACAAGGAAATGAAACTGGTGAGACAGTCCTTTACTTCGGCTGCCGGCATAAGAATGAGGACTTCATTTACCAGGAAGAACTCGAGGAGTTTAAGAAGGCCGGGGTGCTGACACAGTTACATGTGGCCTTTTCCAGGGATCAGGAGCACAAGGTCTATGTCCAACATCTCCTCAAACAGAACAAGGAACATTTATGGAAGCTGATCCACAGCAACAATGCACACATCTACGTCTGCGGTGATGCTCGTAACATGGCCAGGGACGTCCATGAGGCTTTTCACGAGATCGCTGAGGAGGCTGGAGGCCTGACACACACTCAGGCTGTGGACTATTTCCAGCGGCTGATGACTAAAGGCCGCTACTCGCAGGACGTGTGGAGCTGAACCAGACTGTGATCATTACTTTACCTCTGATTTTATACCATTACTTCAGTTATATTTACTGCTTGCGTGCACTGTTACCAGCTCACCATGAGCTGAAGCGAGACTGTGACATTGTGAGATGTACACACAGTAATTTCAGAACATTATGACCATATAGGAACAGTTATGGTAGGAACTGTAGTTCTTCTGTTTTCCTGCCTACCTTGTTATTCTCCTTTCACCCcatttctataaaaaaagagagttCTGACTGTGTATAACCACTGATAAGTAAGTTACAGGGGTTAATGCACTAGACCATGATATTGCAATTGAATTAGCGCCAGTGGAACACAAACACTCCACTGCACAACAATCAGTATTACaacattttgtatttcttttatcaAGTGTGAAATAATCCTTAATATTcatgattatatttatttatttaataaagatgtATTAGTTTTTTGAATGAAACAAAACAACGACCTTTTTgttttatgaatgaatgaagttcaacttatatagcgcctttctagaaacccaaggacgctttaca
>XM_022681504.1
CTTTAttgagaaaatgaagaaaactAAATGTTATAGTGTTCTACGGCTCTCAGACGGGCACGGCTGAGGAGTTCGCTACCCGCCTGGTGAAGGATGCCCAGCGCTATGGTATAAAAGGCATGGTGGCTGACCCTGAGGAGTACGACATGTCTGAGCTGCCTCGTCTCACAGAGGTTGTGAACTCCCTGGCTGTGTTTTGCATGGCCACTTATGGGGAAGGAGAACCGACCGATAACGCCCAGGGCTTTTACGACTGGATGCAAGTGACAGACGTCAGTCTGGAAGGAGTTCATTTCTCAGTGTTTGGGTTGGGGAATAAAACCTATGACCACTACAATGCCATGGGGAAATACACAGACAGACGGCTGGCAGAGCTGGGTGCTACACAAATTTTTGACCTGGGCCTTGGAGATGACGATGGCAACTTGGAGGAAGACTTCATCTCATGGAAGGCACAGTTCTGGCCAGCTGTATGTGCGTTTTTTGGAGTGCAGCCGACACAAGAGGAATGCAGCGTCCGGCAGTTTGAACTGGTGGTCCACAATGACATTGATTTGAATGAGGTGTACACAGGCGAGGTGGGCTGTCTCAAAAGCTTTCAGGTCCAGAAACCGCCTTTTGATGCAAAGAATCCATACTTGGCAGAGGTAACCGTGAACCGTAAACTAAACCAGGGTGGGAGTCGccatttaatgcatttacaacTGGACATCTCTGGCTCTAAAATCAGGTATGATGCTGGAGACCACGTTGCTGTGTACCCCGTGAACGATGTGTCACTGGTGAACAGACTGGGAGAGAGACTTGGTATCGACCTCGACACAGTCATCACTCTGAAGAATCTAGATGaGGAGGCCAGTAAGAAGCACCCGTTCCCCTGCCCCACCACCTACCGCACAGCTCTGACCCACTACCTGGACATCACCAATCCACTGCATACAAATGTGCTGTTTGAGCTGTCTCAGTACGCCTCTGACTcagaggagagggagaggatGTGCAGGatgtcctcctcctcttctgaGGGCAAGGCTCTGTACCACAGTTGGGTGGTGGAGTCTGAGAGGAACATCCTGGCTGTTTTAGAGGACCTGCCGTCTCTGAACCCTCCTGTAGATTACCTGTGTGAGCTTCTACCTCGTCTGCAGGCACGCTACTACTCCATAGCATCATCTGCTAAGGTCCACCCCACCTCTATACACATCTGTGCTGTGGTGCTAGACTACACTACCAAGACAGGGCGAGTCTTCAAGGGAGTAGCCACCAACTGGCtcaaaaacaaagtgaagactGAGGGTGGTCCCTGGCCCACTGTGCCCATCTACGTCAGAAAGTCGCAGTTCCGCCTCCCGTTCAAAGCCAGCAATCCTGTAATTATGATTGGGCCAGGCACCGGAATCGCTCCCTTCATGGGCTTCCTCCAGGAGAGAGCATGGCAGAAACAACAAGGAAATGAAACTGGTGAGACAGTCCTTTACTTCGGCTGCCGGCATAAGAATGAGGACTTCATTTACCAGGAAGAACTCGAGGAGTTTAAGAAGGCCGGGGTGCTGACACAGTTACATGTGGCCTTTTCCAGGGATCAGGAGCACAAGGTCTATGTCCAACATCTCCTCAAACAGAACAAGGAACATTTATGGAAGCTGATCCACAGCAACAATGCACACATCTACGTCTGCGGTGATGCTCGTAACATGGCCAGGGACGTCCATGAGGCTTTTCACGAGATCGCTGAGGAGGCTGGAGGCCTGACACACACTCAGGCTGTGGACTATTTCCAGCGGCTGATGACTAAAGGCCGCTACTCGCAGGACGTGTGGAGCTGAACCAGACTGTGATCATTACTTTACCTCTGATTTTATACCATTACTTCAGTTATATTTACTGCTTGCGTGCACTGTTACCAGCTCACCATGAGCTGAAGCGAGACTGTGACATTGTGAGATGTACACACAGTAATTTCAGAACATTATGACCATATAGGAACAGTTATGGTAGGAACTGTAGTTCTTCTGTTTTCCTGCCTACCTTGTTATTCTCCTTTCACCCcatttctataaaaaaagagagttCTGACTGTGTATAACCACTGATAAGTAAGTTACAGGGGTTAATGCACTAGACCATGATATTGCAATTGAATTAGCGCCAGTGGAACACAAACACTCCACTGCACAACAATCAGTATTACaacattttgtatttcttttatcaAGTGTGAAATAATCCTTAATATTcatgattatatttatttatttaataaagatgtATTAGTTTTTTGAATGAAACAAAACAACGACCTTTTTgttttatgaatgaatgaagttcaacttatatagcgcctttctagaaacccaaggacgctttaca

Function

NR:

description
PREDICTED: NADPH--cytochrome P450 reductase-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0005789 endoplasmic reticulum membrane cellular_component
GO:0005829 cytosol cellular_component
GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen molecular_function
GO:0005506 iron ion binding molecular_function
GO:0003958 NADPH-hemoprotein reductase activity molecular_function
GO:0010181 FMN binding molecular_function

KEGG:

id description
K00327 POR; NADPH-ferrihemoprotein reductase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022681502.1 True 2646 mRNA 0.48 15 35518171 35541791
XM_022681503.1 False 2596 mRNA 0.48 14 35518172 35541791
XM_022681504.1 False 2370 mRNA 0.48 14 35520414 35541791

Neighbor

gene id symbol gene type direction distance location
LOC103023179 tmem120a,LOC108276692,LOC107728827,LOC107579123 coding upstream 13408 35498326 ~ 35504763 (+)
styxl1 NA coding upstream 22876 35488602 ~ 35495295 (+)
LOC111195094 NA coding upstream 154419 35359733 ~ 35363752 (+)
exosc8 exosc8,LOC107577834,LOC107697412 coding upstream 241544 35270958 ~ 35276627 (+)
rfxap rfxap coding upstream 278746 35233840 ~ 35239425 (+)
LOC103043521 adgrg2 coding downstream 16137 35557928 ~ 35596246 (+)
LOC103023820 NA coding downstream 65981 35607772 ~ 35618274 (+)
LOC111194993 NA coding downstream 80308 35622099 ~ 35629462 (+)
LOC103024448 LOC108413536 coding downstream 195174 35736965 ~ 35789237 (+)
LOC103047081 LOC103047081,LOC108411574,LOC107589340,LOC100004523,LOC107697431,LOC107686183,LOC107578020 coding downstream 433686 35975477 ~ 36166303 (+)
G181415 NA non-coding upstream 29703 35484101 ~ 35488468 (+)
G181413 NA non-coding upstream 35549 35482286 ~ 35482622 (+)
G181408 NA non-coding upstream 46239 35470705 ~ 35471932 (+)
G181390 NA non-coding upstream 107807 35408580 ~ 35410364 (+)
G181372 NA non-coding upstream 193007 35324910 ~ 35325164 (+)
G181424 NA non-coding downstream 557 35542348 ~ 35544216 (+)
G181439 NA non-coding downstream 88380 35630171 ~ 35631951 (+)
G181556 NA non-coding downstream 245310 35787101 ~ 35792691 (+)
G181586 NA non-coding downstream 319410 35861201 ~ 35901409 (+)
G181605 NA non-coding downstream 379954 35921745 ~ 35922340 (+)
nsun5 nsun5,LOC102793237,LOC107686168 other upstream 114547 35392521 ~ 35403624 (+)
LOC103024954 LOC108423745 other upstream 1010847 34334576 ~ 34507324 (+)
LOC103026201 LOC108277347,LOC108423746,LOC106604019 other upstream 1189201 34172924 ~ 34328970 (+)
ufm1 ufm1,LOC107701138 other upstream 2450239 33050242 ~ 33067932 (+)
G180460 cct8,LOC100304907,LOC107693911,LOC107701129 other upstream 3244373 32264998 ~ 32273798 (+)
LOC107197592 NA other downstream 58692 35600483 ~ 35607593 (+)
LOC103044041 NA other downstream 143213 35685004 ~ 35702995 (+)
LOC103024766 zdhhc20a,LOC107589301,LOC107743391,LOC107686182,LOC107728865,LOC107697429,LOC108411113,LOC108276908 other downstream 274244 35816035 ~ 35842871 (+)
G181734 NA other downstream 664776 36206567 ~ 36209854 (+)

Expression


Co-expression Network