G181799


Basic Information

Item Value
gene id G181799
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 276671 ~ 278173 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU246212
cacaaacacactgcaatGGTTGCATTGCATGGTTTACTACACCTATTAGTACACAACTAAAGTTTAATATCCAGCCAGTCTCAGGTCTCTGATTGGACGGTTGTGGCCAGAAAGGGTCTTTAAAAGCATCCTCCAGACATCACTGATGTACCTAAAGCTTGTGAAGAATCCTCCGTCTGACTCTATCTGACTCTACAGAGTTTACAAGAAAACATGAAGGTGGCTATCATTGCACTGTGTCTCATTGGACTGTGCTGTGCTCTTCCAgttgaTGATGAGCATGAACGAGACAAGCGATCATCGAGCGGAGAGCGCTACCGAGGAGGATCGTATTATCCTATGTACTACCCCAACAACGGTTTCAACAACGACAACAACAACCTTCTGAACCTGCTGCTGCCCCTGCTACTGGCTCAACTCCCCGCTGCTGCTGCCCCGGCTCCGGCTCCGGCCCCGGCTGGAAAATAATTCACTCAGTGCAATACAATTACATTAAAACAGAGCATGCATGCAATTCATATGTTTTAAGCTATTTCTATTTCTGTGCATTCTTTAAATAAACCTatggatctgaaaaaaaaag

Function

GO:

id name namespace
GO:0005198 structural molecule activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246212 True 583 TUCP 0.45 4 276671 278173

Neighbor

gene id symbol gene type direction distance location
LOC111195169 NA coding upstream 11891 258891 ~ 264780 (+)
LOC103031511 NA coding upstream 20488 250476 ~ 256183 (+)
LOC111195167 NA coding upstream 29351 245466 ~ 247320 (+)
LOC103027206 NA coding upstream 69657 202308 ~ 207014 (+)
LOC103030568 camk2d2,LOC107714220,LOC107742503,LOC107563926 coding upstream 168781 65881 ~ 107890 (+)
LOC103032143 NA coding downstream 29504 307677 ~ 315123 (+)
LOC103032759 NA coding downstream 47463 325636 ~ 329837 (+)
LOC103042564 si:dkey-22i16.2,LOC108260510,LOC108434387,LOC107746771,LOC107674260,LOC107556780 coding downstream 53957 332130 ~ 341442 (+)
tacr3 tacr3a,tacr3,LOC108411976,LOC107552719,LOC107746781,LOC107674253,LOC107556806 coding downstream 100055 378228 ~ 426514 (+)
bdh2 bdh2,LOC107746975 coding downstream 185150 463323 ~ 475354 (+)
G181798 NA non-coding upstream 2838 271554 ~ 273833 (+)
G181797 NA non-coding upstream 7414 268702 ~ 269257 (+)
G181782 rps6kb2,LOC108413157,LOC108260512,LOC103368287,LOC104930044,LOC101478146,LOC102204811 non-coding upstream 45610 211835 ~ 231061 (+)
G181775 NA non-coding upstream 68148 207746 ~ 208523 (+)
G181777 NA non-coding upstream 110627 163629 ~ 166044 (+)
G181800 NA non-coding downstream 1392 279565 ~ 279790 (+)
G181802 NA non-coding downstream 4196 282369 ~ 282804 (+)
G181811 NA non-coding downstream 54407 332580 ~ 333245 (+)
G181816 NA non-coding downstream 154366 432539 ~ 433567 (+)
G181820 NA non-coding downstream 166908 445081 ~ 445298 (+)
G181779 cd027,LOC108413410 other upstream 76675 191957 ~ 199996 (+)
G181801 NA other downstream 3903 282076 ~ 286281 (+)
LOC111195149 NA other downstream 10837 289010 ~ 390166 (+)
LOC111195150 NA other downstream 21922 300095 ~ 306312 (+)
G181818 NA other downstream 113441 391614 ~ 392130 (+)
LOC103029952 fgf20,fgf20a,LOC108412830,LOC103364653,LOC108432889,LOC107747399,LOC107721420,LOC107554387,LOC107702330,LOC107657011 other downstream 2179391 2457564 ~ 2460672 (+)

Expression


Co-expression Network