G181801


Basic Information

Item Value
gene id G181801
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 282076 ~ 286281 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU246214
GCTTTAAAAGCCGAGCTGTTCGGCACTACAGCACTCCAGCCTGAGAACCCTGTGAACCCTCAGCCTCTTCTACCTGCGTCTGAAGACTGAATTACCAAAACAGCCATGAAGCCTGTGCTGATCGTTGCATTGTGCCTTATTGCACTGTGCTGTGCACTTCCGGTTGATGAGGAGCATGAGCGAGAGAAGCGTTCATCGAGTGGCGAGCGAGGATATGGAATGCCTTCCTACTACCCCTACTACGTCAACAACGGCAACAACAACAACCTCCTGAACTACCTGCTTCCCTTCCTCTTAGCCCGGCTGCTCCCGGCTGCTGCTGCCCCCGCCCCCGCCCCCGCCCCAGCCGGAAAATAAACCCTCCAGACCAGCAGCTCCAACACGGAACTCCTGATTTATCTGACATGCTCAACTCTTTATTTGTGATGTCTTGAAATAAAGAtatgataaacaatatttatatttattatgtgtcttattattattattattattattattattattattattattattattattat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246214 True 527 TUCP 0.46 4 282076 286281

Neighbor

gene id symbol gene type direction distance location
LOC111195169 NA coding upstream 17296 258891 ~ 264780 (+)
LOC103031511 NA coding upstream 25893 250476 ~ 256183 (+)
LOC111195167 NA coding upstream 34756 245466 ~ 247320 (+)
LOC103027206 NA coding upstream 75062 202308 ~ 207014 (+)
LOC103030568 camk2d2,LOC107714220,LOC107742503,LOC107563926 coding upstream 174186 65881 ~ 107890 (+)
LOC103032143 NA coding downstream 21396 307677 ~ 315123 (+)
LOC103032759 NA coding downstream 39355 325636 ~ 329837 (+)
LOC103042564 si:dkey-22i16.2,LOC108260510,LOC108434387,LOC107746771,LOC107674260,LOC107556780 coding downstream 45849 332130 ~ 341442 (+)
tacr3 tacr3a,tacr3,LOC108411976,LOC107552719,LOC107746781,LOC107674253,LOC107556806 coding downstream 91947 378228 ~ 426514 (+)
bdh2 bdh2,LOC107746975 coding downstream 177042 463323 ~ 475354 (+)
G181800 NA non-coding upstream 2286 279565 ~ 279790 (+)
G181798 NA non-coding upstream 8243 271554 ~ 273833 (+)
G181797 NA non-coding upstream 12819 268702 ~ 269257 (+)
G181782 rps6kb2,LOC108413157,LOC108260512,LOC103368287,LOC104930044,LOC101478146,LOC102204811 non-coding upstream 51015 211835 ~ 231061 (+)
G181775 NA non-coding upstream 73553 207746 ~ 208523 (+)
G181811 NA non-coding downstream 46299 332580 ~ 333245 (+)
G181816 NA non-coding downstream 146258 432539 ~ 433567 (+)
G181820 NA non-coding downstream 158800 445081 ~ 445298 (+)
G181821 NA non-coding downstream 206317 492598 ~ 500981 (+)
G181927 NA non-coding downstream 343626 629907 ~ 663519 (+)
G181799 NA other upstream 3903 276671 ~ 278173 (+)
G181779 cd027,LOC108413410 other upstream 82080 191957 ~ 199996 (+)
LOC111195149 NA other downstream 2729 289010 ~ 390166 (+)
LOC111195150 NA other downstream 13814 300095 ~ 306312 (+)
G181818 NA other downstream 105333 391614 ~ 392130 (+)
LOC103029952 fgf20,fgf20a,LOC108412830,LOC103364653,LOC108432889,LOC107747399,LOC107721420,LOC107554387,LOC107702330,LOC107657011 other downstream 2171283 2457564 ~ 2460672 (+)
LOC111195173 NA other downstream 2239402 2525683 ~ 2569294 (+)

Expression


Co-expression Network